Cow genome map


           Conread name:
           rpigcf0_004212.y1
        

               Conread position:
               226-416
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               61, 39
               

               Conread position:
               233-416
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               128
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               255-410
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               43, 137
               

               Conread position:
               258-414
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               262-406
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               265-407
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               268-414
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               279-415
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               106
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               280-417
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               286-406
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               286-422
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               287-392
               

               Cow position:
               
               

               Alignm length:
               107
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               287-416
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-397
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               288-406
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               288-412
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               288-417
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               289-420
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               292-416
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               101
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               292-416
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               292-417
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               293-388
               

               Cow position:
               
               

               Alignm length:
               96
               

               Alignm identity:
               80
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-401
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               88
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-402
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-404
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-405
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-405
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               293-405
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-406
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               93
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               15, 51
               

               Conread position:
               293-410
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               97
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               102, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               94
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               100
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               34, 93
               

               Conread position:
               293-416
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               293-417
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               293-418
               

               Cow position:
               
               

               Alignm length:
               126
               

               Alignm identity:
               98
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               294-404
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               294-405
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               294-406
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               294-417
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               99
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 89
               

               Conread position:
               294-418
               

               Cow position:
               
               

               Alignm length:
               125
               

               Alignm identity:
               96
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               295-387
               

               Cow position:
               
               

               Alignm length:
               93
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-404
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               295-405
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-405
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-406
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               295-409
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-415
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               295-416
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-416
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               296-406
               

               Cow position:
               
               

               Alignm length:
               111
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               296-407
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-407
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               89
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-413
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               296-414
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               100
               

               Alignm E-value:
               9e-28
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               296-417
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               99
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-417
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               97
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               297-415
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               94
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               297-416
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               92
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               297-417
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               98
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               297-417
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               298-405
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               90
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               298-416
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               14, 57
               

               Conread position:
               298-417
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               298-417
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               95
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 49
               

               Conread position:
               300-416
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               301-397
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               302-387
               

               Cow position:
               
               

               Alignm length:
               86
               

               Alignm identity:
               75
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               302-416
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               303-416
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               94
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-387
               

               Cow position:
               
               

               Alignm length:
               84
               

               Alignm identity:
               75
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-405
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               85
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-405
               

               Cow position:
               
               

               Alignm length:
               102
               

               Alignm identity:
               84
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-406
               

               Cow position:
               
               

               Alignm length:
               103
               

               Alignm identity:
               84
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-411
               

               Cow position:
               
               

               Alignm length:
               108
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               304-412
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-413
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               87
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-416
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-416
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-416
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               304-416
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               304-419
               

               Cow position:
               
               

               Alignm length:
               116
               

               Alignm identity:
               91
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               305-416
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               305-416
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               308-416
               

               Cow position:
               
               

               Alignm length:
               109
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               308-417
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-408
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-414
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-415
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               85
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-416
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               86
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               311-416
               

               Cow position:
               
               

               Alignm length:
               106
               

               Alignm identity:
               88
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-419
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               311-423
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               311-425
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               312-403
               

               Cow position:
               
               

               Alignm length:
               92
               

               Alignm identity:
               78
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               312-416
               

               Cow position:
               
               

               Alignm length:
               105
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               11, 0
               
Show alignments to all cow chromosomes.