Cow genome map
| Conread name: | rpigcf0_004212.y1 | 
| Conread position: | 226-416 | 
| Cow position: | chr3:75974819-75975008 (view UCSC Genome Browser custom track) | 
| Alignm length: | 192 | 
| Alignm identity: | 135 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 61, 39 | 
| Conread position: | 233-416 | 
| Cow position: | chr3:23920175-23920355 (view UCSC Genome Browser custom track) | 
| Alignm length: | 184 | 
| Alignm identity: | 128 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 58, 0 | 
| Conread position: | 255-410 | 
| Cow position: | chr3:45314587-45314429 (view UCSC Genome Browser custom track) | 
| Alignm length: | 160 | 
| Alignm identity: | 117 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 43, 137 | 
| Conread position: | 258-414 | 
| Cow position: | chr3:2648280-2648435 (view UCSC Genome Browser custom track) | 
| Alignm length: | 157 | 
| Alignm identity: | 115 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 57, 0 | 
| Conread position: | 262-406 | 
| Cow position: | chr3:61680541-61680398 (view UCSC Genome Browser custom track) | 
| Alignm length: | 145 | 
| Alignm identity: | 107 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 27, 0 | 
| Conread position: | 265-407 | 
| Cow position: | chr3:51012225-51012366 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 268-414 | 
| Cow position: | chr3:55318680-55318825 (view UCSC Genome Browser custom track) | 
| Alignm length: | 147 | 
| Alignm identity: | 111 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 33, 0 | 
| Conread position: | 279-415 | 
| Cow position: | chr3:51608974-51609112 (view UCSC Genome Browser custom track) | 
| Alignm length: | 139 | 
| Alignm identity: | 106 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 49, 0 | 
| Conread position: | 280-417 | 
| Cow position: | chr3:15973775-15973640 (view UCSC Genome Browser custom track) | 
| Alignm length: | 138 | 
| Alignm identity: | 108 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 35, 0 | 
| Conread position: | 286-406 | 
| Cow position: | chr3:64800348-64800466 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 22, 0 | 
| Conread position: | 286-422 | 
| Cow position: | chr3:47735426-47735284 (view UCSC Genome Browser custom track) | 
| Alignm length: | 143 | 
| Alignm identity: | 113 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 287-392 | 
| Cow position: | chr3:42348283-42348177 (view UCSC Genome Browser custom track) | 
| Alignm length: | 107 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 25, 0 | 
| Conread position: | 287-416 | 
| Cow position: | chr3:35079305-35079434 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 288-397 | 
| Cow position: | chr3:29413278-29413170 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 288-406 | 
| Cow position: | chr3:43388929-43389044 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 288-412 | 
| Cow position: | chr3:76172483-76172607 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 288-417 | 
| Cow position: | chr3:79877229-79877100 (view UCSC Genome Browser custom track) | 
| Alignm length: | 130 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 289-420 | 
| Cow position: | chr3:40212836-40212968 (view UCSC Genome Browser custom track) | 
| Alignm length: | 133 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 2e-25 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 292-416 | 
| Cow position: | chr3:48468372-48468247 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 13, 0 | 
| Conread position: | 292-416 | 
| Cow position: | chr3:76300969-76300845 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 292-417 | 
| Cow position: | chr3:51150325-51150202 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 43, 0 | 
| Conread position: | 293-388 | 
| Cow position: | chr3:43727463-43727368 (view UCSC Genome Browser custom track) | 
| Alignm length: | 96 | 
| Alignm identity: | 80 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-401 | 
| Cow position: | chr3:12621181-12621289 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-402 | 
| Cow position: | chr3:49823514-49823405 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-404 | 
| Cow position: | chr3:79398339-79398228 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-405 | 
| Cow position: | chr3:3556742-3556630 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-405 | 
| Cow position: | chr3:7381639-7381748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 9, 0 | 
| Conread position: | 293-405 | 
| Cow position: | chr3:44960139-44960027 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-406 | 
| Cow position: | chr3:52635915-52635802 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 15, 51 | 
| Conread position: | 293-410 | 
| Cow position: | chr3:53836516-53836633 (view UCSC Genome Browser custom track) | 
| Alignm length: | 118 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:18699914-18700037 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 104 | 
| Alignm E-value: | 1e-30 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:20888466-20888590 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:22078272-22078149 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:22165221-22165342 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 102, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:35624349-35624472 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:58452239-58452116 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:59391931-59392054 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:66563982-66563856 (view UCSC Genome Browser custom track) | 
| Alignm length: | 127 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:68587213-68587095 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 34, 93 | 
| Conread position: | 293-416 | 
| Cow position: | chr3:76168437-76168558 (view UCSC Genome Browser custom track) | 
| Alignm length: | 124 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 293-417 | 
| Cow position: | chr3:3656710-3656588 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 103 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 23, 51 | 
| Conread position: | 293-418 | 
| Cow position: | chr3:2025396-2025272 (view UCSC Genome Browser custom track) | 
| Alignm length: | 126 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 294-404 | 
| Cow position: | chr3:20802445-20802557 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 20, 0 | 
| Conread position: | 294-405 | 
| Cow position: | chr3:53271023-53270915 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 294-406 | 
| Cow position: | chr3:4071578-4071688 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 294-417 | 
| Cow position: | chr3:59317894-59317774 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 89 | 
| Conread position: | 294-418 | 
| Cow position: | chr3:1452824-1452947 (view UCSC Genome Browser custom track) | 
| Alignm length: | 125 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 21, 0 | 
| Conread position: | 295-387 | 
| Cow position: | chr3:30180275-30180183 (view UCSC Genome Browser custom track) | 
| Alignm length: | 93 | 
| Alignm identity: | 79 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 295-404 | 
| Cow position: | chr3:40794526-40794636 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 2e-24 | 
| Alignm gaps (pig, cow): | 15, 0 | 
| Conread position: | 295-405 | 
| Cow position: | chr3:83705343-83705453 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 295-405 | 
| Cow position: | chr3:83889441-83889331 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 295-406 | 
| Cow position: | chr3:24220389-24220499 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 295-409 | 
| Cow position: | chr3:11608009-11607895 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 295-415 | 
| Cow position: | chr3:45744103-45743983 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 21, 91 | 
| Conread position: | 295-416 | 
| Cow position: | chr3:42933675-42933554 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 101 | 
| Alignm E-value: | 1e-28 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 295-416 | 
| Cow position: | chr3:73410474-73410357 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 96 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 14, 0 | 
| Conread position: | 296-406 | 
| Cow position: | chr3:72027829-72027720 (view UCSC Genome Browser custom track) | 
| Alignm length: | 111 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 19, 0 | 
| Conread position: | 296-407 | 
| Cow position: | chr3:12090868-12090757 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 296-407 | 
| Cow position: | chr3:13882327-13882438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 296-413 | 
| Cow position: | chr3:31555125-31555007 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 76, 0 | 
| Conread position: | 296-414 | 
| Cow position: | chr3:33460407-33460526 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 100 | 
| Alignm E-value: | 9e-28 | 
| Alignm gaps (pig, cow): | 16, 0 | 
| Conread position: | 296-417 | 
| Cow position: | chr3:1011683-1011562 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 99 | 
| Alignm E-value: | 8e-27 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 296-417 | 
| Cow position: | chr3:21694418-21694298 (view UCSC Genome Browser custom track) | 
| Alignm length: | 122 | 
| Alignm identity: | 97 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 69, 0 | 
| Conread position: | 297-415 | 
| Cow position: | chr3:56972391-56972273 (view UCSC Genome Browser custom track) | 
| Alignm length: | 119 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 297-416 | 
| Cow position: | chr3:44218958-44218839 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 297-417 | 
| Cow position: | chr3:59926823-59926703 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 98 | 
| Alignm E-value: | 2e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 297-417 | 
| Cow position: | chr3:59947856-59947738 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 298-405 | 
| Cow position: | chr3:210511-210404 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 298-416 | 
| Cow position: | chr3:60371174-60371056 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 14, 57 | 
| Conread position: | 298-417 | 
| Cow position: | chr3:31804582-31804700 (view UCSC Genome Browser custom track) | 
| Alignm length: | 120 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 18, 0 | 
| Conread position: | 298-417 | 
| Cow position: | chr3:49482524-49482642 (view UCSC Genome Browser custom track) | 
| Alignm length: | 121 | 
| Alignm identity: | 95 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 7, 49 | 
| Conread position: | 300-416 | 
| Cow position: | chr3:78115403-78115519 (view UCSC Genome Browser custom track) | 
| Alignm length: | 117 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 301-397 | 
| Cow position: | chr3:57760707-57760611 (view UCSC Genome Browser custom track) | 
| Alignm length: | 97 | 
| Alignm identity: | 81 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 302-387 | 
| Cow position: | chr3:28937398-28937483 (view UCSC Genome Browser custom track) | 
| Alignm length: | 86 | 
| Alignm identity: | 75 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 302-416 | 
| Cow position: | chr3:47198941-47199053 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 39, 0 | 
| Conread position: | 303-416 | 
| Cow position: | chr3:29386053-29385940 (view UCSC Genome Browser custom track) | 
| Alignm length: | 114 | 
| Alignm identity: | 94 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-387 | 
| Cow position: | chr3:58527560-58527477 (view UCSC Genome Browser custom track) | 
| Alignm length: | 84 | 
| Alignm identity: | 75 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-405 | 
| Cow position: | chr3:29944043-29943942 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-405 | 
| Cow position: | chr3:58497843-58497742 (view UCSC Genome Browser custom track) | 
| Alignm length: | 102 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 5e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-406 | 
| Cow position: | chr3:10454027-10453925 (view UCSC Genome Browser custom track) | 
| Alignm length: | 103 | 
| Alignm identity: | 84 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-411 | 
| Cow position: | chr3:67519995-67520099 (view UCSC Genome Browser custom track) | 
| Alignm length: | 108 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 304-412 | 
| Cow position: | chr3:39969680-39969788 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-413 | 
| Cow position: | chr3:37641509-37641400 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 87 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-416 | 
| Cow position: | chr3:986198-986086 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 2e-23 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-416 | 
| Cow position: | chr3:11253982-11254094 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 89 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-416 | 
| Cow position: | chr3:58562884-58562772 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 304-416 | 
| Cow position: | chr3:80958327-80958438 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 0 | 
| Conread position: | 304-419 | 
| Cow position: | chr3:81276993-81277107 (view UCSC Genome Browser custom track) | 
| Alignm length: | 116 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 7, 0 | 
| Conread position: | 305-416 | 
| Cow position: | chr3:55730284-55730395 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 93 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 305-416 | 
| Cow position: | chr3:70333787-70333898 (view UCSC Genome Browser custom track) | 
| Alignm length: | 112 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 308-416 | 
| Cow position: | chr3:24468205-24468311 (view UCSC Genome Browser custom track) | 
| Alignm length: | 109 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 5e-23 | 
| Alignm gaps (pig, cow): | 38, 0 | 
| Conread position: | 308-417 | 
| Cow position: | chr3:72626563-72626672 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 92 | 
| Alignm E-value: | 7e-26 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 311-408 | 
| Cow position: | chr3:59702350-59702253 (view UCSC Genome Browser custom track) | 
| Alignm length: | 98 | 
| Alignm identity: | 81 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 311-414 | 
| Cow position: | chr3:45183645-45183748 (view UCSC Genome Browser custom track) | 
| Alignm length: | 104 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 6e-25 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 311-415 | 
| Cow position: | chr3:14558936-14558832 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 85 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 311-416 | 
| Cow position: | chr3:8147347-8147451 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 62, 0 | 
| Conread position: | 311-416 | 
| Cow position: | chr3:15443550-15443655 (view UCSC Genome Browser custom track) | 
| Alignm length: | 106 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 6e-24 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 311-419 | 
| Cow position: | chr3:623926-623817 (view UCSC Genome Browser custom track) | 
| Alignm length: | 110 | 
| Alignm identity: | 88 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 89, 0 | 
| Conread position: | 311-423 | 
| Cow position: | chr3:23131992-23132104 (view UCSC Genome Browser custom track) | 
| Alignm length: | 113 | 
| Alignm identity: | 90 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 311-425 | 
| Cow position: | chr3:2636758-2636872 (view UCSC Genome Browser custom track) | 
| Alignm length: | 115 | 
| Alignm identity: | 91 | 
| Alignm E-value: | 2e-22 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 312-403 | 
| Cow position: | chr3:68303493-68303402 (view UCSC Genome Browser custom track) | 
| Alignm length: | 92 | 
| Alignm identity: | 78 | 
| Alignm E-value: | 4e-21 | 
| Alignm gaps (pig, cow): | 0, 0 | 
| Conread position: | 312-416 | 
| Cow position: | chr3:61023846-61023949 (view UCSC Genome Browser custom track) | 
| Alignm length: | 105 | 
| Alignm identity: | 86 | 
| Alignm E-value: | 1e-21 | 
| Alignm gaps (pig, cow): | 11, 0 | 
Show alignments to all cow chromosomes.
