Cow genome map

Conread name: rpigcf0_004212.y1

Conread position: 246-406
Cow position: chr8:25785988-25786145 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 117
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 36, 0

Conread position: 250-405
Cow position: chr8:5937693-5937542 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 259-393
Cow position: chr8:38643246-38643378 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 268-416
Cow position: chr8:26009135-26008990 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 271-416
Cow position: chr8:24406388-24406533 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 29, 107

Conread position: 277-415
Cow position: chr8:36771227-36771086 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 281-393
Cow position: chr8:43112609-43112722 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 284-405
Cow position: chr8:12105789-12105667 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 53

Conread position: 284-406
Cow position: chr8:5385446-5385566 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 287-384
Cow position: chr8:37388270-37388367 (view UCSC Genome Browser custom track)
Alignm length: 99
Alignm identity: 83
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 10, 18

Conread position: 287-407
Cow position: chr8:26305629-26305748 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 28, 0

Conread position: 287-411
Cow position: chr8:48450246-48450371 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 70, 0

Conread position: 288-403
Cow position: chr8:35456605-35456720 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 289-416
Cow position: chr8:39352641-39352771 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 290-416
Cow position: chr8:46964970-46964844 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 291-410
Cow position: chr8:31249757-31249638 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 291-415
Cow position: chr8:4992785-4992657 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 292-384
Cow position: chr8:34035902-34035811 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 79
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 292-399
Cow position: chr8:17140368-17140473 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 292-400
Cow position: chr8:50770388-50770282 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 292-410
Cow position: chr8:39872774-39872890 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 52

Conread position: 292-414
Cow position: chr8:5173054-5173176 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 93
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 292-415
Cow position: chr8:38641484-38641361 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 292-416
Cow position: chr8:10194295-10194173 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 17, 0

Conread position: 292-417
Cow position: chr8:35527404-35527529 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 292-424
Cow position: chr8:55900794-55900927 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 293-387
Cow position: chr8:1188141-1188048 (view UCSC Genome Browser custom track)
Alignm length: 95
Alignm identity: 80
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 293-389
Cow position: chr8:17013360-17013264 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 82
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 293-401
Cow position: chr8:21222860-21222752 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 86
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-401
Cow position: chr8:48675275-48675166 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 293-402
Cow position: chr8:20212269-20212378 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 293-403
Cow position: chr8:39066458-39066348 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 293-404
Cow position: chr8:20897577-20897466 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-404
Cow position: chr8:34820085-34820197 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 89
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 293-404
Cow position: chr8:37571473-37571585 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 293-404
Cow position: chr8:39499734-39499842 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 293-404
Cow position: chr8:52197227-52197338 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 293-405
Cow position: chr8:19228661-19228774 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 293-406
Cow position: chr8:27731269-27731156 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 293-406
Cow position: chr8:32260322-32260209 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 293-406
Cow position: chr8:38331295-38331183 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 22, 0

Conread position: 293-408
Cow position: chr8:48437005-48437119 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 102, 0

Conread position: 293-415
Cow position: chr8:37298707-37298585 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 293-415
Cow position: chr8:61845320-61845441 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 293-416
Cow position: chr8:8112968-8112847 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 35, 0

Conread position: 293-416
Cow position: chr8:20327623-20327746 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 293-416
Cow position: chr8:35827573-35827695 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 293-416
Cow position: chr8:48182734-48182610 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 293-419
Cow position: chr8:6795614-6795490 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 293-420
Cow position: chr8:51511626-51511752 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 15, 25

Conread position: 294-403
Cow position: chr8:59092655-59092764 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 294-404
Cow position: chr8:32332243-32332353 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 91
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 294-405
Cow position: chr8:47667748-47667858 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 83, 0

Conread position: 294-415
Cow position: chr8:39427302-39427180 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 107

Conread position: 294-415
Cow position: chr8:53606290-53606411 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 294-416
Cow position: chr8:17199202-17199324 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 294-416
Cow position: chr8:46543894-46544015 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 294-419
Cow position: chr8:5665457-5665585 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 295-405
Cow position: chr8:39116360-39116249 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 93
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 295-406
Cow position: chr8:2375791-2375902 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 295-406
Cow position: chr8:28322200-28322089 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 295-412
Cow position: chr8:19223435-19223549 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 20, 0

Conread position: 295-416
Cow position: chr8:18870112-18869990 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 295-416
Cow position: chr8:25083402-25083283 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 295-416
Cow position: chr8:36912304-36912427 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 295-416
Cow position: chr8:39968054-39968173 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 95, 0

Conread position: 295-416
Cow position: chr8:45352025-45352142 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 296-405
Cow position: chr8:10832204-10832314 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 93, 0

Conread position: 296-406
Cow position: chr8:28382858-28382968 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 296-411
Cow position: chr8:51524233-51524118 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 91
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 296-415
Cow position: chr8:35816892-35817010 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 296-416
Cow position: chr8:39556358-39556237 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 297-414
Cow position: chr8:47057438-47057555 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 297-415
Cow position: chr8:37683797-37683679 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 297-416
Cow position: chr8:20783038-20783155 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 301-404
Cow position: chr8:24419066-24419168 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 0

Conread position: 302-405
Cow position: chr8:12058944-12058842 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 21, 0

Conread position: 302-413
Cow position: chr8:42145546-42145657 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 303-404
Cow position: chr8:25554608-25554708 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 16, 0

Conread position: 303-406
Cow position: chr8:20112653-20112552 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 89
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 43, 0

Conread position: 304-404
Cow position: chr8:9942305-9942406 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 91, 0

Conread position: 304-405
Cow position: chr8:36054384-36054282 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 304-414
Cow position: chr8:42378678-42378788 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 87
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr8:1651811-1651699 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr8:2968797-2968685 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr8:3057061-3056949 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 304-416
Cow position: chr8:26626090-26625977 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 304-416
Cow position: chr8:42758499-42758611 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 304-420
Cow position: chr8:26707524-26707408 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 306-406
Cow position: chr8:43940682-43940780 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 307-413
Cow position: chr8:6665326-6665434 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 88
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 307-413
Cow position: chr8:30284251-30284145 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 307-416
Cow position: chr8:37148528-37148419 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 308-415
Cow position: chr8:3423220-3423113 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 309-420
Cow position: chr8:47225784-47225894 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 311-417
Cow position: chr8:20105660-20105766 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 87
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 315-406
Cow position: chr8:16144340-16144249 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 78
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 324-416
Cow position: chr8:20109483-20109391 (view UCSC Genome Browser custom track)
Alignm length: 93
Alignm identity: 78
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.