Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_004352.y1
        

               Conread position:
               1-167
               

               Cow position:
               chr21:8686621-8686447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-167
               

               Cow position:
               chr21:28625721-28625894 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               128
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               1-179
               

               Cow position:
               chr21:10000677-10000490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               1-187
               

               Cow position:
               chr21:1752332-1752527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-192
               

               Cow position:
               chr21:13257282-13257482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-195
               

               Cow position:
               chr21:16889902-16889699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-196
               

               Cow position:
               chr21:9218547-9218742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               142
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               15, 54
               

               Conread position:
               1-197
               

               Cow position:
               chr21:21076740-21076944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               13, 146
               

               Conread position:
               1-197
               

               Cow position:
               chr21:32560026-32559821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-212
               

               Cow position:
               chr21:16278323-16278543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               1-216
               

               Cow position:
               chr21:11353434-11353658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-256
               

               Cow position:
               chr21:42917735-42917999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-264
               

               Cow position:
               chr21:9981076-9980817 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               17, 181
               

               Conread position:
               1-266
               

               Cow position:
               chr21:10292331-10292059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               15, 158
               

               Conread position:
               1-292
               

               Cow position:
               chr21:5840785-5841084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               11, 84
               

               Conread position:
               1-295
               

               Cow position:
               chr21:19702136-19702439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               1-295
               

               Cow position:
               chr21:31948504-31948807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-295
               

               Cow position:
               chr21:31950355-31950658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               217
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-327
               

               Cow position:
               chr21:18979243-18978898 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 72
               

               Conread position:
               1-328
               

               Cow position:
               chr21:443644-443978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               21, 71
               

               Conread position:
               1-331
               

               Cow position:
               chr21:20549310-20548958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 238
               

               Conread position:
               1-332
               

               Cow position:
               chr21:46462803-46463148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 78
               

               Conread position:
               1-333
               

               Cow position:
               chr21:10756853-10757194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               211
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-337
               

               Cow position:
               chr21:33993454-33993100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-342
               

               Cow position:
               chr21:5153229-5153581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 71
               

               Conread position:
               1-348
               

               Cow position:
               chr21:3782712-3783075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-348
               

               Cow position:
               chr21:26399843-26399480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               364
               

               Alignm identity:
               248
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-358
               

               Cow position:
               chr21:3818723-3819090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 84
               

               Conread position:
               1-360
               

               Cow position:
               chr21:33770619-33770997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               10, 66
               

               Conread position:
               1-361
               

               Cow position:
               chr21:2709948-2709572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-361
               

               Cow position:
               chr21:21909967-21910343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-361
               

               Cow position:
               chr21:40479203-40479579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               264
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-361
               

               Cow position:
               chr21:47429282-47429657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-366
               

               Cow position:
               chr21:34900617-34900998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               262
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-382
               

               Cow position:
               chr21:363265-363654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 255
               

               Conread position:
               1-389
               

               Cow position:
               chr21:21967096-21967483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               15, 67
               

               Conread position:
               1-390
               

               Cow position:
               chr21:23683154-23683560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 295
               

               Conread position:
               1-392
               

               Cow position:
               chr21:48085-48494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               278
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               1-393
               

               Cow position:
               chr21:5857524-5857118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 69
               

               Conread position:
               1-393
               

               Cow position:
               chr21:9209248-9209650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               277
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-393
               

               Cow position:
               chr21:13735220-13734809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-393
               

               Cow position:
               chr21:16575505-16575097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-393
               

               Cow position:
               chr21:19626768-19626357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-393
               

               Cow position:
               chr21:26628709-26629117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-393
               

               Cow position:
               chr21:29424000-29424399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-393
               

               Cow position:
               chr21:30571138-30570730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-393
               

               Cow position:
               chr21:34909804-34910211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               1-404
               

               Cow position:
               chr21:4998873-4998460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 223
               

               Conread position:
               1-404
               

               Cow position:
               chr21:28477237-28477650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 203
               

               Conread position:
               1-404
               

               Cow position:
               chr21:34658650-34659060 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               1-405
               

               Cow position:
               chr21:33209811-33210229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 168
               

               Conread position:
               1-406
               

               Cow position:
               chr21:4282252-4281844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 168
               

               Conread position:
               1-406
               

               Cow position:
               chr21:36756220-36756626 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               293
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               1-408
               

               Cow position:
               chr21:8981510-8981094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               288
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 195
               

               Conread position:
               1-408
               

               Cow position:
               chr21:44122667-44123091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-408
               

               Cow position:
               chr21:46912155-46912570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 92
               

               Conread position:
               1-409
               

               Cow position:
               chr21:15545750-15545331 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 72
               

               Conread position:
               1-409
               

               Cow position:
               chr21:48484828-48484415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 183
               

               Conread position:
               1-410
               

               Cow position:
               chr21:4079966-4080391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 231
               

               Conread position:
               1-410
               

               Cow position:
               chr21:12365999-12366414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 72
               

               Conread position:
               1-410
               

               Cow position:
               chr21:32535597-32536008 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               1-411
               

               Cow position:
               chr21:28512153-28512561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 132
               

               Conread position:
               1-412
               

               Cow position:
               chr21:21103660-21104089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-412
               

               Cow position:
               chr21:47140081-47139655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-414
               

               Cow position:
               chr21:10436782-10437211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 65
               

               Conread position:
               1-415
               

               Cow position:
               chr21:24222927-24222500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 166
               

               Conread position:
               1-416
               

               Cow position:
               chr21:2938641-2939071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:4473406-4472979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               286
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:7525059-7525489 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:7597329-7596892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               295
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:10075322-10074892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:11509878-11510308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 72
               

               Conread position:
               1-416
               

               Cow position:
               chr21:16794952-16795382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:17411895-17411470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               282
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:18574456-18574886 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:21624026-21624456 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:22100258-22099828 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:27036390-27036820 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:27863908-27863476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 217
               

               Conread position:
               1-416
               

               Cow position:
               chr21:29954832-29955262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:30134731-30135158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               292
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:30655581-30656011 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:30849325-30848908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 42
               

               Conread position:
               1-416
               

               Cow position:
               chr21:31039740-31039310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:33709558-33709128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:38848858-38848428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:39225006-39224576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-416
               

               Cow position:
               chr21:40244046-40244479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               1-416
               

               Cow position:
               chr21:41795782-41795352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-417
               

               Cow position:
               chr21:5455378-5454948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 234
               

               Conread position:
               1-417
               

               Cow position:
               chr21:34391354-34390932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 72
               

               Conread position:
               1-417
               

               Cow position:
               chr21:46973523-46973093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               10, 93
               

               Conread position:
               1-420
               

               Cow position:
               chr21:10854198-10854638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-420
               

               Cow position:
               chr21:33832036-33831611 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               289
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 183
               

               Conread position:
               1-421
               

               Cow position:
               chr21:10571212-10571638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               293
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               18, 278
               

               Conread position:
               1-424
               

               Cow position:
               chr21:22855834-22856265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 196
               

               Conread position:
               1-425
               

               Cow position:
               chr21:1179324-1178888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-426
               

               Cow position:
               chr21:27147612-27147167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-427
               

               Cow position:
               chr21:13111185-13110744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 430
               

               Conread position:
               1-430
               

               Cow position:
               chr21:2420117-2420549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 206
               

               Conread position:
               1-430
               

               Cow position:
               chr21:21216529-21216091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               327
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 340
               

               Conread position:
               1-430
               

               Cow position:
               chr21:44514879-44515314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               1-432
               

               Cow position:
               chr21:150088-150534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               1-432
               

               Cow position:
               chr21:6623761-6624209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 53
               

               Conread position:
               1-432
               

               Cow position:
               chr21:17144760-17145210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               1-432
               

               Cow position:
               chr21:26875533-26875980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 73
               

               Conread position:
               1-432
               

               Cow position:
               chr21:33901368-33901814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 73
               

               Conread position:
               1-432
               

               Cow position:
               chr21:39700464-39700015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 251
               

               Conread position:
               1-432
               

               Cow position:
               chr21:47649283-47649729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 162
               

               Conread position:
               2-185
               

               Cow position:
               chr21:12075792-12075610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               130
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               2-192
               

               Cow position:
               chr21:297336-297531 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               12, 166
               

               Conread position:
               2-231
               

               Cow position:
               chr21:19237331-19237567 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               14, 204
               

               Conread position:
               2-252
               

               Cow position:
               chr21:44657931-44658189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               18, 225
               

               Conread position:
               2-305
               

               Cow position:
               chr21:11195746-11196058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               221
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               16, 66
               

               Conread position:
               2-321
               

               Cow position:
               chr21:13300766-13301094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               2-327
               

               Cow position:
               chr21:34899741-34899401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               235
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               2-359
               

               Cow position:
               chr21:8126172-8125816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               11, 138
               

               Conread position:
               2-359
               

               Cow position:
               chr21:44566083-44565727 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               251
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               68, 100
               

               Conread position:
               2-363
               

               Cow position:
               chr21:35898008-35897647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 196
               

               Conread position:
               2-382
               

               Cow position:
               chr21:19766468-19766860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 70
               

               Conread position:
               2-392
               

               Cow position:
               chr21:30965999-30965594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               2-407
               

               Cow position:
               chr21:28617215-28617618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               2-408
               

               Cow position:
               chr21:81686-82110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 12
               

               Conread position:
               2-416
               

               Cow position:
               chr21:23329399-23328970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 72
               

               Conread position:
               2-416
               

               Cow position:
               chr21:32191793-32192212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 51
               

               Conread position:
               2-423
               

               Cow position:
               chr21:15976256-15976679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 164
               

               Conread position:
               2-423
               

               Cow position:
               chr21:29942609-29943047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 242
               

               Conread position:
               2-424
               

               Cow position:
               chr21:23606288-23606718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 70
               

               Conread position:
               2-424
               

               Cow position:
               chr21:45866552-45866978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 71
               

               Conread position:
               2-425
               

               Cow position:
               chr21:5238019-5238432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 71
               

               Conread position:
               2-427
               

               Cow position:
               chr21:41957570-41957128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 289
               

               Conread position:
               2-429
               

               Cow position:
               chr21:20262721-20262283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 71
               

               Conread position:
               2-429
               

               Cow position:
               chr21:25764248-25764685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 70
               

               Conread position:
               2-430
               

               Cow position:
               chr21:27230178-27229741 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 38
               

               Conread position:
               2-430
               

               Cow position:
               chr21:42500651-42501094 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 202
               

               Conread position:
               2-430
               

               Cow position:
               chr21:43240477-43240915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 23
               

               Conread position:
               2-432
               

               Cow position:
               chr21:4585734-4585307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 164
               

               Conread position:
               2-432
               

               Cow position:
               chr21:7672735-7673175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 233
               

               Conread position:
               2-432
               

               Cow position:
               chr21:30904988-30904568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               294
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               17, 166
               

               Conread position:
               2-432
               

               Cow position:
               chr21:47823659-47823219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               14, 171
               

               Conread position:
               2-432
               

               Cow position:
               chr21:48459255-48458806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               3-400
               

               Cow position:
               chr21:18932108-18932507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               275
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               15, 29
               

               Conread position:
               3-417
               

               Cow position:
               chr21:45916088-45915671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 235
               

               Conread position:
               4-414
               

               Cow position:
               chr21:15584788-15584382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 164
               

               Conread position:
               4-424
               

               Cow position:
               chr21:43933-44349 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 165
               

               Conread position:
               5-187
               

               Cow position:
               chr21:3047280-3047471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               5-195
               

               Cow position:
               chr21:44761740-44761541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               5-211
               

               Cow position:
               chr21:29999965-29999750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               5-275
               

               Cow position:
               chr21:33415175-33414896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               191
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               7, 184
               

               Conread position:
               5-305
               

               Cow position:
               chr21:22856796-22857105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               224
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               5-305
               

               Cow position:
               chr21:25158509-25158816 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 68
               

               Conread position:
               5-363
               

               Cow position:
               chr21:31158875-31159248 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 12
               

               Conread position:
               5-391
               

               Cow position:
               chr21:17174765-17175164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 105
               

               Conread position:
               5-404
               

               Cow position:
               chr21:34738216-34738636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               5-408
               

               Cow position:
               chr21:168030-167634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               279
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               8, 69
               

               Conread position:
               5-409
               

               Cow position:
               chr21:912345-911935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 107
               

               Conread position:
               5-416
               

               Cow position:
               chr21:17479001-17479411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               275
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 89
               

               Conread position:
               5-416
               

               Cow position:
               chr21:33245544-33245113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               295
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               6, 68
               

               Conread position:
               5-417
               

               Cow position:
               chr21:3813851-3813444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 181
               

               Conread position:
               5-417
               

               Cow position:
               chr21:42914128-42913704 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               8, 335
               

               Conread position:
               5-418
               

               Cow position:
               chr21:1463849-1464273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 195
               

               Conread position:
               5-420
               

               Cow position:
               chr21:30595134-30594697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               291
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               7, 129
               

               Conread position:
               5-424
               

               Cow position:
               chr21:20925889-20925459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 136
               

               Conread position:
               5-427
               

               Cow position:
               chr21:3236145-3236569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 222
               

               Conread position:
               5-427
               

               Cow position:
               chr21:37299082-37299509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 333
               

               Conread position:
               5-432
               

               Cow position:
               chr21:28914747-28914303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 240
               

               Conread position:
               7-368
               

               Cow position:
               chr21:18935390-18935751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               9, 105
               

               Conread position:
               7-382
               

               Cow position:
               chr21:21967939-21968319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               10-183
               

               Cow position:
               chr21:31934-32113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               10-185
               

               Cow position:
               chr21:8451468-8451649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 172
               

               Conread position:
               10-187
               

               Cow position:
               chr21:25473125-25473308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               53, 139
               

               Conread position:
               10-197
               

               Cow position:
               chr21:22464412-22464607 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               10-203
               

               Cow position:
               chr21:471246-471458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               10-216
               

               Cow position:
               chr21:39674962-39675176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               162
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               10-236
               

               Cow position:
               chr21:12325656-12325892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               49, 103
               

               Conread position:
               10-264
               

               Cow position:
               chr21:45668-45929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               196
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               52, 207
               

               Conread position:
               10-266
               

               Cow position:
               chr21:33579815-33580073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               192
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               95, 56
               

               Conread position:
               10-283
               

               Cow position:
               chr21:14462144-14461867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               41, 101
               

               Conread position:
               10-295
               

               Cow position:
               chr21:684111-684395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               206
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               53, 90
               

               Conread position:
               10-312
               

               Cow position:
               chr21:12338789-12339105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               47, 139
               

               Conread position:
               10-312
               

               Cow position:
               chr21:36909443-36909758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               229
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               10-327
               

               Cow position:
               chr21:8420293-8420600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               217
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               53, 91
               

               Conread position:
               10-327
               

               Cow position:
               chr21:36711816-36712147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               237
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               49, 182
               

               Conread position:
               10-327
               

               Cow position:
               chr21:37352788-37352474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               222
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               46, 92
               

               Conread position:
               10-330
               

               Cow position:
               chr21:22140719-22140387 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 211
               

               Conread position:
               10-340
               

               Cow position:
               chr21:26681315-26680983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               246
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               48, 152
               

               Conread position:
               10-345
               

               Cow position:
               chr21:25598617-25598966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               249
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               10-357
               

               Cow position:
               chr21:34254656-34254300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               10-358
               

               Cow position:
               chr21:38691818-38692166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 59
               

               Conread position:
               10-359
               

               Cow position:
               chr21:9863002-9862657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               253
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               58, 191
               

               Conread position:
               10-359
               

               Cow position:
               chr21:24130709-24131061 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 94
               

               Conread position:
               10-367
               

               Cow position:
               chr21:27341962-27341610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 56
               

               Conread position:
               10-372
               

               Cow position:
               chr21:937675-938028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               10-378
               

               Cow position:
               chr21:48262753-48263123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               55, 159
               

               Conread position:
               10-382
               

               Cow position:
               chr21:38867943-38867568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               280
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               10-389
               

               Cow position:
               chr21:25480212-25480605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               396
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               10-389
               

               Cow position:
               chr21:39672297-39672669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               265
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               10-393
               

               Cow position:
               chr21:5641885-5641488 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               273
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               10-393
               

               Cow position:
               chr21:19698935-19698546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               278
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               97, 39
               

               Conread position:
               10-395
               

               Cow position:
               chr21:7564699-7564300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 230
               

               Conread position:
               10-395
               

               Cow position:
               chr21:25382621-25383031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 257
               

               Conread position:
               10-395
               

               Cow position:
               chr21:33420092-33419706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 45
               

               Conread position:
               10-406
               

               Cow position:
               chr21:18494603-18494998 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 57
               

               Conread position:
               10-406
               

               Cow position:
               chr21:39401217-39401623 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 45
               

               Conread position:
               10-407
               

               Cow position:
               chr21:26244561-26244948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               64, 78
               

               Conread position:
               10-408
               

               Cow position:
               chr21:5595287-5595687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               10-409
               

               Cow position:
               chr21:37706794-37706388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               290
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               53, 61
               

               Conread position:
               10-409
               

               Cow position:
               chr21:44826242-44825859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               405
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               10-411
               

               Cow position:
               chr21:9940553-9940156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               52, 103
               

               Conread position:
               10-412
               

               Cow position:
               chr21:451827-452242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 62
               

               Conread position:
               10-412
               

               Cow position:
               chr21:33562657-33563044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 47
               

               Conread position:
               10-414
               

               Cow position:
               chr21:3920589-3920174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 358
               

               Conread position:
               10-415
               

               Cow position:
               chr21:24796411-24796001 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 153
               

               Conread position:
               10-416
               

               Cow position:
               chr21:5596777-5597189 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               49, 67
               

               Conread position:
               10-416
               

               Cow position:
               chr21:20370318-20370737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               10-416
               

               Cow position:
               chr21:26854740-26854321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               10-416
               

               Cow position:
               chr21:33983187-33982766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 332
               

               Conread position:
               10-416
               

               Cow position:
               chr21:34181618-34182034 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               282
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               10-416
               

               Cow position:
               chr21:36892279-36891862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 62
               

               Conread position:
               10-417
               

               Cow position:
               chr21:10514435-10514845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 172
               

               Conread position:
               10-421
               

               Cow position:
               chr21:393645-394062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 362
               

               Conread position:
               10-421
               

               Cow position:
               chr21:28989235-28989652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 159
               

               Conread position:
               10-422
               

               Cow position:
               chr21:2495548-2495130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 156
               

               Conread position:
               10-422
               

               Cow position:
               chr21:8290020-8289588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 101
               

               Conread position:
               10-422
               

               Cow position:
               chr21:23192895-23192471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 414
               

               Conread position:
               10-423
               

               Cow position:
               chr21:4905345-4904920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 200
               

               Conread position:
               10-423
               

               Cow position:
               chr21:24607019-24607433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               272, 60
               

               Conread position:
               10-424
               

               Cow position:
               chr21:28881772-28882181 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 98
               

               Conread position:
               10-424
               

               Cow position:
               chr21:36163340-36162915 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 62
               

               Conread position:
               10-426
               

               Cow position:
               chr21:32297879-32297460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 212
               

               Conread position:
               10-427
               

               Cow position:
               chr21:5649529-5649958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 61
               

               Conread position:
               10-427
               

               Cow position:
               chr21:36297119-36297540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 75
               

               Conread position:
               10-429
               

               Cow position:
               chr21:12616766-12617188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 31
               

               Conread position:
               10-430
               

               Cow position:
               chr21:725265-724834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 71
               

               Conread position:
               10-430
               

               Cow position:
               chr21:2366964-2367382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 270
               

               Conread position:
               10-430
               

               Cow position:
               chr21:22719151-22718733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 38
               

               Conread position:
               10-430
               

               Cow position:
               chr21:29069702-29069277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               97, 5
               

               Conread position:
               10-430
               

               Cow position:
               chr21:29214532-29214110 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 156
               

               Conread position:
               10-432
               

               Cow position:
               chr21:18289287-18289715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 46
               

               Conread position:
               10-432
               

               Cow position:
               chr21:19062321-19062716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               277
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               79, 60
               

               Conread position:
               10-432
               

               Cow position:
               chr21:21170321-21169892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 362
               

               Conread position:
               10-432
               

               Cow position:
               chr21:42540597-42540170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 72
               

               Conread position:
               11-308
               

               Cow position:
               chr21:4035366-4035063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               201
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               11-345
               

               Cow position:
               chr21:37874142-37874490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 60
               

               Conread position:
               11-393
               

               Cow position:
               chr21:9743955-9743559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 61
               

               Conread position:
               11-412
               

               Cow position:
               chr21:26835670-26835255 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               11-422
               

               Cow position:
               chr21:5021092-5021516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 398
               

               Conread position:
               11-424
               

               Cow position:
               chr21:23984658-23984234 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 7
               

               Conread position:
               11-432
               

               Cow position:
               chr21:7815094-7814654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 385
               

               Conread position:
               11-432
               

               Cow position:
               chr21:21785463-21785029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 370
               

               Conread position:
               12-417
               

               Cow position:
               chr21:17455028-17455425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               51, 93
               

               Conread position:
               13-327
               

               Cow position:
               chr21:46777347-46777026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 248
               

               Conread position:
               13-379
               

               Cow position:
               chr21:13395177-13395553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               265
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               44, 156
               

               Conread position:
               13-414
               

               Cow position:
               chr21:45152004-45151583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 7
               

               Conread position:
               13-430
               

               Cow position:
               chr21:4794847-4795277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 325
               

               Conread position:
               13-432
               

               Cow position:
               chr21:24136544-24136979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 191
               

               Conread position:
               14-193
               

               Cow position:
               chr21:33154951-33155137 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               14-327
               

               Cow position:
               chr21:17262485-17262168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 57
               

               Conread position:
               14-389
               

               Cow position:
               chr21:4189467-4189847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 52
               

               Conread position:
               14-407
               

               Cow position:
               chr21:26829608-26829229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               403
               

               Alignm identity:
               280
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               38, 57
               

               Conread position:
               14-416
               

               Cow position:
               chr21:11143893-11143480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 58
               

               Conread position:
               14-430
               

               Cow position:
               chr21:16612256-16612675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 275
               

               Conread position:
               15-416
               

               Cow position:
               chr21:30688561-30688151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 57
               

               Conread position:
               15-424
               

               Cow position:
               chr21:30232071-30231650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               432
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               16-313
               

               Cow position:
               chr21:45263391-45263087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 198
               

               Conread position:
               16-391
               

               Cow position:
               chr21:13070235-13069847 (view UCSC Genome Browser custom track)
               

               Alignm length:
               393
               

               Alignm identity:
               259
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               42, 130
               

               Conread position:
               16-416
               

               Cow position:
               chr21:10151437-10151834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               408
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 91
               

               Conread position:
               16-430
               

               Cow position:
               chr21:16789350-16789773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 367
               

               Conread position:
               16-432
               

               Cow position:
               chr21:47767754-47767329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 404
               

               Conread position:
               17-421
               

               Cow position:
               chr21:23821801-23822210 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 13
               

               Conread position:
               18-359
               

               Cow position:
               chr21:19668758-19668419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               89, 44
               

               Conread position:
               18-427
               

               Cow position:
               chr21:16696001-16696420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               19-416
               

               Cow position:
               chr21:45474123-45473718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 52
               

               Conread position:
               19-423
               

               Cow position:
               chr21:9415875-9416293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 115
               

               Conread position:
               21-430
               

               Cow position:
               chr21:19363816-19363409 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 173
               

               Conread position:
               22-264
               

               Cow position:
               chr21:2657226-2657472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               193
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               39, 53
               

               Conread position:
               22-409
               

               Cow position:
               chr21:44671388-44671783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               402
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 351
               

               Conread position:
               23-195
               

               Cow position:
               chr21:42136208-42136036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               23-404
               

               Cow position:
               chr21:16909691-16910089 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 214
               

               Conread position:
               24-229
               

               Cow position:
               chr21:14727693-14727896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               35, 62
               

               Conread position:
               24-350
               

               Cow position:
               chr21:20162172-20162510 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 226
               

               Conread position:
               25-430
               

               Cow position:
               chr21:30990628-30990228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               413
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               28-406
               

               Cow position:
               chr21:42190517-42190146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 82
               

               Conread position:
               30-427
               

               Cow position:
               chr21:37479602-37480002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 136
               

               Conread position:
               36-431
               

               Cow position:
               chr21:11759806-11759414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               406
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 32
               

               Conread position:
               39-417
               

               Cow position:
               chr21:5137855-5137443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               20, 32
               

               Conread position:
               43-430
               

               Cow position:
               chr21:641243-641637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 215
               

               Conread position:
               49-430
               

               Cow position:
               chr21:38120766-38121151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 255
               

               Conread position:
               50-417
               

               Cow position:
               chr21:20160348-20160719 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 170
               

               Conread position:
               53-427
               

               Cow position:
               chr21:31691147-31691528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 137
               

               Conread position:
               58-427
               

               Cow position:
               chr21:42905697-42905328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               26, 12
               

               Conread position:
               60-422
               

               Cow position:
               chr21:13048521-13048151 (view UCSC Genome Browser custom track)
               

               Alignm length:
               375
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               61-427
               

               Cow position:
               chr21:11645309-11644919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               392
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 8
               

               Conread position:
               62-410
               

               Cow position:
               chr21:7132785-7132435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 157
               

               Conread position:
               62-420
               

               Cow position:
               chr21:24857987-24858356 (view UCSC Genome Browser custom track)
               

               Alignm length:
               372
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 309
               

               Conread position:
               66-415
               

               Cow position:
               chr21:2786113-2785738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               380
               

               Alignm identity:
               269
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               9, 182
               

               Conread position:
               70-418
               

               Cow position:
               chr21:25536678-25537040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               13, 113
               

               Conread position:
               71-430
               

               Cow position:
               chr21:6833737-6834099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 216
               

               Conread position:
               71-430
               

               Cow position:
               chr21:46263862-46264222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               366
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 95
               

               Conread position:
               72-424
               

               Cow position:
               chr21:30607410-30607043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               373
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               35, 13
               

               Conread position:
               76-423
               

               Cow position:
               chr21:40786361-40786722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 66
               

               Conread position:
               80-432
               

               Cow position:
               chr21:46037535-46037184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               107-404
               

               Cow position:
               chr21:34010660-34010371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               107-416
               

               Cow position:
               chr21:34653814-34654113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               221
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               107-417
               

               Cow position:
               chr21:395605-395911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               293, 78
               

               Conread position:
               107-421
               

               Cow position:
               chr21:16188068-16187765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               303, 38
               

               Conread position:
               107-428
               

               Cow position:
               chr21:19170183-19169859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               142, 62
               

               Conread position:
               112-427
               

               Cow position:
               chr21:23500089-23499781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               226
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               174, 104
               

               Conread position:
               113-358
               

               Cow position:
               chr21:43631459-43631219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               184, 65
               

               Conread position:
               113-401
               

               Cow position:
               chr21:32237033-32237318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               218, 47
               

               Conread position:
               113-408
               

               Cow position:
               chr21:7452392-7452093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               188, 63
               

               Conread position:
               113-412
               

               Cow position:
               chr21:25282054-25281759 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               206
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               178, 29
               

               Conread position:
               113-415
               

               Cow position:
               chr21:40058538-40058845 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 106
               

               Conread position:
               113-415
               

               Cow position:
               chr21:41974646-41974336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               113-422
               

               Cow position:
               chr21:36793615-36793937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               227
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               105, 230
               

               Conread position:
               113-424
               

               Cow position:
               chr21:41155595-41155909 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               171, 88
               

               Conread position:
               113-427
               

               Cow position:
               chr21:10882159-10882486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 308
               

               Conread position:
               113-427
               

               Cow position:
               chr21:42023868-42024169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               191, 74
               

               Conread position:
               113-430
               

               Cow position:
               chr21:11639754-11640072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               230
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               19, 12
               

               Conread position:
               113-430
               

               Cow position:
               chr21:12961180-12960848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 286
               

               Conread position:
               113-430
               

               Cow position:
               chr21:18850493-18850176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               62, 169
               

               Conread position:
               113-430
               

               Cow position:
               chr21:19196435-19196114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               103, 300
               

               Conread position:
               113-432
               

               Cow position:
               chr21:1529495-1529182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 66
               

               Conread position:
               114-372
               

               Cow position:
               chr21:5566725-5566994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               202
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               122, 75
               

               Conread position:
               115-406
               

               Cow position:
               chr21:10727016-10727306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               285, 103
               

               Conread position:
               116-390
               

               Cow position:
               chr21:20377626-20377357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               210, 45
               

               Conread position:
               116-393
               

               Cow position:
               chr21:15867051-15867324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               153, 53
               

               Conread position:
               116-409
               

               Cow position:
               chr21:43357525-43357227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 102
               

               Conread position:
               118-420
               

               Cow position:
               chr21:36857368-36857671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               212
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               174, 67
               

               Conread position:
               118-426
               

               Cow position:
               chr21:5971098-5970789 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               221
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               193, 95
               

               Conread position:
               119-410
               

               Cow position:
               chr21:13035310-13035012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               219
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               90, 237
               

               Conread position:
               119-422
               

               Cow position:
               chr21:44252089-44251800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 184
               

               Conread position:
               119-432
               

               Cow position:
               chr21:47802523-47802207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 264
               

               Conread position:
               120-420
               

               Cow position:
               chr21:21223024-21223326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               224
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               56, 100
               

               Conread position:
               120-430
               

               Cow position:
               chr21:11740392-11740069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 243
               

               Conread position:
               122-416
               

               Cow position:
               chr21:22353491-22353192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               5, 13
               

               Conread position:
               122-430
               

               Cow position:
               chr21:23150277-23149970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               161, 92
               

               Conread position:
               126-414
               

               Cow position:
               chr21:4267604-4267310 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               209
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               175, 276
               

               Conread position:
               132-403
               

               Cow position:
               chr21:5636969-5636693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               150, 0
               

               Conread position:
               135-421
               

               Cow position:
               chr21:13128339-13128054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               210
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               41, 86
               

               Conread position:
               145-406
               

               Cow position:
               chr21:15445314-15445044 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               152, 0
               

               Conread position:
               147-410
               

               Cow position:
               chr21:42348911-42348644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               213
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               147, 257
               

               Conread position:
               156-430
               

               Cow position:
               chr21:28626017-28626292 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               210
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               131, 81
               

               Conread position:
               159-424
               

               Cow position:
               chr21:10007863-10007595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               57, 110
               

               Conread position:
               164-363
               

               Cow position:
               chr21:24797479-24797672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               54, 0
               

               Conread position:
               169-406
               

               Cow position:
               chr21:13365130-13365369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               46, 120
               

               Conread position:
               170-379
               

               Cow position:
               chr21:46829477-46829269 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               19, 6
               

               Conread position:
               170-404
               

               Cow position:
               chr21:30592508-30592281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               112, 24
               

               Conread position:
               170-416
               

               Cow position:
               chr21:21652259-21652509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               174
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               124, 56
               

               Conread position:
               171-424
               

               Cow position:
               chr21:41620911-41621169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               105, 5
               

               Conread position:
               174-430
               

               Cow position:
               chr21:8549475-8549732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               198
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               127, 23
               

               Conread position:
               175-432
               

               Cow position:
               chr21:16503913-16503655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 240
               

               Conread position:
               176-404
               

               Cow position:
               chr21:7067840-7068079 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               176-405
               

               Cow position:
               chr21:40133951-40134187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               182
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               176-407
               

               Cow position:
               chr21:8618070-8618306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 0
               

               Conread position:
               176-409
               

               Cow position:
               chr21:19083804-19083562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               183
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               100, 31
               

               Conread position:
               176-410
               

               Cow position:
               chr21:24094948-24094716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               153, 86
               

               Conread position:
               176-415
               

               Cow position:
               chr21:6051302-6051544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               121, 213
               

               Conread position:
               176-421
               

               Cow position:
               chr21:1058873-1059122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               123, 39
               

               Conread position:
               176-426
               

               Cow position:
               chr21:29484780-29485028 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               234, 38
               

               Conread position:
               176-430
               

               Cow position:
               chr21:22860798-22861052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               228, 38
               

               Conread position:
               177-372
               

               Cow position:
               chr21:34835626-34835440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               177-382
               

               Cow position:
               chr21:41579548-41579760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               117, 41
               

               Conread position:
               177-412
               

               Cow position:
               chr21:8206587-8206803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               223, 77
               

               Conread position:
               177-422
               

               Cow position:
               chr21:35996968-35997219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               177-430
               

               Cow position:
               chr21:12801947-12801699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               200
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               115, 41
               

               Conread position:
               177-432
               

               Cow position:
               chr21:28955319-28955560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               178-426
               

               Cow position:
               chr21:47067089-47066851 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               58, 40
               

               Conread position:
               179-406
               

               Cow position:
               chr21:27521526-27521303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               170
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               147, 39
               

               Conread position:
               179-427
               

               Cow position:
               chr21:28443580-28443326 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 211
               

               Conread position:
               180-387
               

               Cow position:
               chr21:8648029-8648245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               180-416
               

               Cow position:
               chr21:31676298-31676536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 82
               

               Conread position:
               180-417
               

               Cow position:
               chr21:3763936-3763699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               98, 7
               

               Conread position:
               181-417
               

               Cow position:
               chr21:13738372-13738603 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               96, 37
               

               Conread position:
               181-420
               

               Cow position:
               chr21:33791567-33791324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               107, 238
               

               Conread position:
               181-430
               

               Cow position:
               chr21:18842437-18842187 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               102, 163
               

               Conread position:
               182-416
               

               Cow position:
               chr21:3361212-3360975 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               119, 26
               

               Conread position:
               182-416
               

               Cow position:
               chr21:33727659-33727426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               118, 102
               

               Conread position:
               183-417
               

               Cow position:
               chr21:17428305-17428538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               6, 53
               

               Conread position:
               185-365
               

               Cow position:
               chr21:13585253-13585082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               142
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               185-417
               

               Cow position:
               chr21:17300187-17300427 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               185-417
               

               Cow position:
               chr21:42135819-42135581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 0
               

               Conread position:
               185-420
               

               Cow position:
               chr21:35569579-35569338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 33
               

               Conread position:
               185-422
               

               Cow position:
               chr21:46242434-46242193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               91, 29
               

               Conread position:
               185-432
               

               Cow position:
               chr21:21077134-21077378 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               190
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               21, 64
               

               Conread position:
               186-413
               

               Cow position:
               chr21:31253341-31253580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               186-424
               

               Cow position:
               chr21:42841785-42841553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               141, 27
               

               Conread position:
               187-432
               

               Cow position:
               chr21:7666784-7667039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               114, 0
               

               Conread position:
               188-426
               

               Cow position:
               chr21:45850902-45850663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               179
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               104, 26
               

               Conread position:
               189-393
               

               Cow position:
               chr21:2525914-2526127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-25
               

               Alignm gaps (pig, cow):
               7, 15
               

               Conread position:
               189-396
               

               Cow position:
               chr21:40065506-40065296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               20, 60
               

               Conread position:
               189-406
               

               Cow position:
               chr21:5426755-5426969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               140, 23
               

               Conread position:
               189-432
               

               Cow position:
               chr21:19174512-19174765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               189-432
               

               Cow position:
               chr21:32559545-32559307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               94, 122
               

               Conread position:
               191-409
               

               Cow position:
               chr21:47764301-47764084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               89, 31
               

               Conread position:
               192-418
               

               Cow position:
               chr21:40589671-40589444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               94, 143
               

               Conread position:
               193-417
               

               Cow position:
               chr21:10493590-10493822 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               108, 202
               

               Conread position:
               193-430
               

               Cow position:
               chr21:18845202-18844962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               190
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               85, 48
               

               Conread position:
               200-407
               

               Cow position:
               chr21:45375436-45375651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               168
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               200-417
               

               Cow position:
               chr21:17183741-17183963 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               15, 36
               

               Conread position:
               202-380
               

               Cow position:
               chr21:27146172-27145987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               202-432
               

               Cow position:
               chr21:13488341-13488578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               95, 0
               

               Conread position:
               203-417
               

               Cow position:
               chr21:18790733-18790518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               122, 78
               

               Conread position:
               203-417
               

               Cow position:
               chr21:37345279-37345056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               203-417
               

               Cow position:
               chr21:49662294-49662082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               89, 53
               

               Conread position:
               204-424
               

               Cow position:
               chr21:41455126-41454904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               89, 14
               

               Conread position:
               205-408
               

               Cow position:
               chr21:32339912-32339706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               205-412
               

               Cow position:
               chr21:22194286-22194078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               125, 76
               

               Conread position:
               205-424
               

               Cow position:
               chr21:41198586-41198355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               207-424
               

               Cow position:
               chr21:10608629-10608407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               10, 207
               

               Conread position:
               210-414
               

               Cow position:
               chr21:41951469-41951257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               146
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               212-406
               

               Cow position:
               chr21:10000912-10001104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               150
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               115, 43
               

               Conread position:
               215-410
               

               Cow position:
               chr21:27624547-27624740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               159
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               61, 26
               

               Conread position:
               219-419
               

               Cow position:
               chr21:6910044-6909835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 7
               

               Conread position:
               220-421
               

               Cow position:
               chr21:28244315-28244513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               149
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               181, 64
               

               Conread position:
               222-424
               

               Cow position:
               chr21:13840164-13840371 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               64, 39
               

               Conread position:
               224-425
               

               Cow position:
               chr21:31511137-31511337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               62, 23
               

               Conread position:
               226-415
               

               Cow position:
               chr21:24642364-24642559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               235-417
               

               Cow position:
               chr21:11250720-11250916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               59, 186
               

               Conread position:
               235-430
               

               Cow position:
               chr21:18041988-18041797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               155
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               238-415
               

               Cow position:
               chr21:7825318-7825142 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               59, 160
               

               Conread position:
               238-421
               

               Cow position:
               chr21:35354395-35354576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               49, 22
               

               Conread position:
               239-417
               

               Cow position:
               chr21:29978903-29978721 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               47, 6
               

               Conread position:
               239-424
               

               Cow position:
               chr21:957526-957717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               39, 119
               

               Conread position:
               242-407
               

               Cow position:
               chr21:12462109-12461941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               242-412
               

               Cow position:
               chr21:2293854-2294023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               89, 39
               

               Conread position:
               243-406
               

               Cow position:
               chr21:20152810-20152983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               134
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               243-415
               

               Cow position:
               chr21:39809762-39809932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               157, 53
               

               Conread position:
               244-403
               

               Cow position:
               chr21:14515709-14515876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               245-427
               

               Cow position:
               chr21:20260456-20260272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               245-430
               

               Cow position:
               chr21:17856408-17856594 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               52, 89
               

               Conread position:
               250-424
               

               Cow position:
               chr21:34151450-34151630 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               35, 171
               

               Conread position:
               252-407
               

               Cow position:
               chr21:27810276-27810438 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               255-430
               

               Cow position:
               chr21:20192777-20192947 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               48, 20
               

               Conread position:
               257-425
               

               Cow position:
               chr21:46552224-46552058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               7, 43
               

               Conread position:
               257-430
               

               Cow position:
               chr21:30222218-30222395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               40, 107
               

               Conread position:
               261-430
               

               Cow position:
               chr21:2260473-2260314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               262-432
               

               Cow position:
               chr21:18414932-18415105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               133
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               24, 163
               

               Conread position:
               263-415
               

               Cow position:
               chr21:4568168-4568323 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               23, 85
               

               Conread position:
               271-417
               

               Cow position:
               chr21:9980073-9979931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 55
               

               Conread position:
               276-416
               

               Cow position:
               chr21:30835260-30835405 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               277-418
               

               Cow position:
               chr21:10561687-10561544 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               278-409
               

               Cow position:
               chr21:45906721-45906590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               279-424
               

               Cow position:
               chr21:17008882-17009025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               51, 69
               

               Conread position:
               282-400
               

               Cow position:
               chr21:30250286-30250174 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               282-417
               

               Cow position:
               chr21:5985414-5985275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               108
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               43, 105
               

               Conread position:
               282-417
               

               Cow position:
               chr21:22465101-22465235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               93, 100
               

               Conread position:
               302-432
               

               Cow position:
               chr21:44214048-44214179 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               100, 0
               
Show alignments to all cow chromosomes.
Conread position:	1-167
Cow position:	chr21:8686621-8686447 (view UCSC Genome Browser custom track)
Alignm length:	177
Alignm identity:	130
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	10, 73
Conread position:	1-179
Cow position:	chr21:10000677-10000490 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	137
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	15, 72
Conread position:	1-187
Cow position:	chr21:1752332-1752527 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	143
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	10, 73
Conread position:	1-192
Cow position:	chr21:13257282-13257482 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	143
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	10, 73
Conread position:	1-195
Cow position:	chr21:16889902-16889699 (view UCSC Genome Browser custom track)
Alignm length:	205
Alignm identity:	145
Alignm E-value:	2e-23
Alignm gaps (pig, cow):	10, 73
Conread position:	1-196
Cow position:	chr21:9218547-9218742 (view UCSC Genome Browser custom track)
Alignm length:	201
Alignm identity:	142
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	15, 54
Conread position:	1-197
Cow position:	chr21:21076740-21076944 (view UCSC Genome Browser custom track)
Alignm length:	206
Alignm identity:	149
Alignm E-value:	4e-27
Alignm gaps (pig, cow):	13, 146
Conread position:	1-212
Cow position:	chr21:16278323-16278543 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	160
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	14, 0
Conread position:	1-216
Cow position:	chr21:11353434-11353658 (view UCSC Genome Browser custom track)
Alignm length:	227
Alignm identity:	167
Alignm E-value:	6e-32
Alignm gaps (pig, cow):	10, 73
Conread position:	1-256
Cow position:	chr21:42917735-42917999 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	185
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	10, 73
Conread position:	1-264
Cow position:	chr21:9981076-9980817 (view UCSC Genome Browser custom track)
Alignm length:	268
Alignm identity:	190
Alignm E-value:	9e-36
Alignm gaps (pig, cow):	17, 181
Conread position:	1-266
Cow position:	chr21:10292331-10292059 (view UCSC Genome Browser custom track)
Alignm length:	275
Alignm identity:	182
Alignm E-value:	8e-24
Alignm gaps (pig, cow):	15, 158
Conread position:	1-292
Cow position:	chr21:5840785-5841084 (view UCSC Genome Browser custom track)
Alignm length:	301
Alignm identity:	211
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	11, 84
Conread position:	1-295
Cow position:	chr21:19702136-19702439 (view UCSC Genome Browser custom track)
Alignm length:	304
Alignm identity:	228
Alignm E-value:	0
Alignm gaps (pig, cow):	12, 0
Conread position:	1-327
Cow position:	chr21:18979243-18978898 (view UCSC Genome Browser custom track)
Alignm length:	351
Alignm identity:	257
Alignm E-value:	0
Alignm gaps (pig, cow):	17, 72
Conread position:	1-328
Cow position:	chr21:443644-443978 (view UCSC Genome Browser custom track)
Alignm length:	338
Alignm identity:	200
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	21, 71
Conread position:	1-331
Cow position:	chr21:20549310-20548958 (view UCSC Genome Browser custom track)
Alignm length:	355
Alignm identity:	256
Alignm E-value:	0
Alignm gaps (pig, cow):	14, 238
Conread position:	1-332
Cow position:	chr21:46462803-46463148 (view UCSC Genome Browser custom track)
Alignm length:	349
Alignm identity:	252
Alignm E-value:	0
Alignm gaps (pig, cow):	17, 78
Conread position:	1-333
Cow position:	chr21:10756853-10757194 (view UCSC Genome Browser custom track)
Alignm length:	344
Alignm identity:	211
Alignm E-value:	6.00036e-42
Alignm gaps (pig, cow):	10, 73
Conread position:	1-337
Cow position:	chr21:33993454-33993100 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	247
Alignm E-value:	2e-40
Alignm gaps (pig, cow):	10, 73