Cow genome map

Conread name: rpigcf0_004787.y1

Conread position: 1-151
Cow position: chr10:59462328-59462179 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 115, 8

Conread position: 4-159
Cow position: chr10:34646256-34646408 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 126
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 22, 29

Conread position: 6-155
Cow position: chr10:55733414-55733565 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 59, 8

Conread position: 6-159
Cow position: chr10:57095006-57095162 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 25, 12

Conread position: 9-156
Cow position: chr10:14947452-14947296 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 24, 122

Conread position: 11-159
Cow position: chr10:49862658-49862505 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 123
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 28, 0

Conread position: 13-159
Cow position: chr10:2535756-2535610 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 18, 50

Conread position: 14-159
Cow position: chr10:10634398-10634257 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 37, 13

Conread position: 16-148
Cow position: chr10:26607429-26607566 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 45, 16

Conread position: 16-159
Cow position: chr10:6384713-6384569 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 121
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 45, 16

Conread position: 16-159
Cow position: chr10:32440390-32440238 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 45, 16

Conread position: 17-155
Cow position: chr10:1417779-1417637 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 15

Conread position: 17-159
Cow position: chr10:26102961-26103099 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 22, 93

Conread position: 17-159
Cow position: chr10:39124324-39124171 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 22, 0

Conread position: 17-159
Cow position: chr10:49146694-49146554 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 18-152
Cow position: chr10:10120373-10120239 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 80, 14

Conread position: 18-155
Cow position: chr10:23346119-23346261 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 21, 101

Conread position: 18-156
Cow position: chr10:5784066-5784213 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 14

Conread position: 18-158
Cow position: chr10:37425953-37426094 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 116
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 46, 14

Conread position: 18-158
Cow position: chr10:37507963-37508110 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 116
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 18-158
Cow position: chr10:48130202-48130056 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 118

Conread position: 18-159
Cow position: chr10:10104967-10104819 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr10:15817611-15817756 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 118
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 18-159
Cow position: chr10:19191939-19191792 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 43, 9

Conread position: 18-159
Cow position: chr10:34903662-34903514 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr10:41676227-41676371 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 13, 134

Conread position: 18-159
Cow position: chr10:45371246-45371094 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 117
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr10:52695545-52695688 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 14

Conread position: 18-159
Cow position: chr10:58651003-58651151 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 121
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr10:60240035-60240181 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 43, 9

Conread position: 18-159
Cow position: chr10:61509758-61509905 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 123
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr10:62353644-62353497 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 119
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 40, 0

Conread position: 19-158
Cow position: chr10:34661146-34661286 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 45, 81

Conread position: 19-159
Cow position: chr10:1996488-1996632 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 19-159
Cow position: chr10:3562482-3562630 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 13

Conread position: 19-159
Cow position: chr10:35731341-35731489 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 19-159
Cow position: chr10:37529088-37529227 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 40, 85

Conread position: 19-159
Cow position: chr10:48407318-48407176 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 90, 13

Conread position: 20-152
Cow position: chr10:58451196-58451329 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 107
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 20-159
Cow position: chr10:6066995-6067125 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 20-159
Cow position: chr10:48316134-48316273 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 19, 95

Conread position: 22-159
Cow position: chr10:22888637-22888776 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 87, 10

Conread position: 24-159
Cow position: chr10:21348814-21348950 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 89, 39

Conread position: 25-158
Cow position: chr10:18751294-18751436 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 26-156
Cow position: chr10:48347885-48347747 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 112
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 13, 115

Conread position: 26-159
Cow position: chr10:9575867-9576010 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 113
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 26-159
Cow position: chr10:46886326-46886192 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 26

Conread position: 27-157
Cow position: chr10:31528145-31528010 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 27-158
Cow position: chr10:25475710-25475572 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 28-147
Cow position: chr10:51544498-51544381 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 34, 54

Conread position: 28-159
Cow position: chr10:24448037-24447907 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 11, 34

Conread position: 28-159
Cow position: chr10:28395130-28395263 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 28-159
Cow position: chr10:28841130-28840996 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 28-159
Cow position: chr10:33694545-33694413 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 82

Conread position: 28-159
Cow position: chr10:34654933-34655070 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 28-159
Cow position: chr10:40999036-40998896 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 28-159
Cow position: chr10:49029825-49029690 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 111
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 26, 0

Conread position: 28-159
Cow position: chr10:55395800-55395938 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 29-157
Cow position: chr10:60697453-60697586 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 29-158
Cow position: chr10:47429999-47429865 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 32, 96

Conread position: 32-158
Cow position: chr10:24276557-24276686 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 32-159
Cow position: chr10:31362046-31362175 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 68

Conread position: 38-138
Cow position: chr10:10964683-10964585 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 83
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 38-154
Cow position: chr10:48178506-48178390 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 72

Conread position: 38-155
Cow position: chr10:24756575-24756454 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 96
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 38-155
Cow position: chr10:46327857-46327733 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 38-158
Cow position: chr10:7383450-7383574 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 104
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 22, 0

Conread position: 38-158
Cow position: chr10:20553346-20553224 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 56, 0

Conread position: 38-158
Cow position: chr10:59417071-59417196 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr10:2857214-2857085 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 38-159
Cow position: chr10:6242356-6242475 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr10:7089507-7089385 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 23, 62

Conread position: 38-159
Cow position: chr10:8404373-8404254 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 23, 55

Conread position: 38-159
Cow position: chr10:10138027-10137903 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 24, 0

Conread position: 38-159
Cow position: chr10:17150039-17149918 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 21, 47

Conread position: 38-159
Cow position: chr10:25822087-25822205 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 23, 73

Conread position: 38-159
Cow position: chr10:38205550-38205672 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 20, 83

Conread position: 38-159
Cow position: chr10:54848944-54848816 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr10:57786503-57786377 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 38-159
Cow position: chr10:60345755-60345870 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 39-157
Cow position: chr10:51289410-51289290 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 22, 78

Conread position: 41-144
Cow position: chr10:7835431-7835539 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 41-159
Cow position: chr10:9675309-9675425 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 42-159
Cow position: chr10:67626838-67626957 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 43-156
Cow position: chr10:38266940-38266823 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 51, 0

Conread position: 43-157
Cow position: chr10:31877815-31877929 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 66, 18

Conread position: 43-159
Cow position: chr10:17448047-17448160 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 43-159
Cow position: chr10:21422003-21422121 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 52, 93

Conread position: 43-159
Cow position: chr10:22390758-22390635 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 43-159
Cow position: chr10:27178648-27178531 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 60, 110

Conread position: 43-159
Cow position: chr10:56828158-56828279 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 18, 0

Conread position: 44-159
Cow position: chr10:3276129-3276011 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 16, 0

Conread position: 46-157
Cow position: chr10:65904400-65904284 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 51-159
Cow position: chr10:52278875-52278763 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 8e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 57-159
Cow position: chr10:24971186-24971288 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 40, 57

Show alignments to all cow chromosomes.