Cow genome map
Conread name: | rpigcf0_004787.y1 |
Conread position: | 3-159 |
Cow position: | chr13:9612837-9612992 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 121 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 58, 29 |
Conread position: | 7-159 |
Cow position: | chr13:26698731-26698575 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 117 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 54, 25 |
Conread position: | 13-158 |
Cow position: | chr13:20217629-20217476 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 17-159 |
Cow position: | chr13:27198691-27198831 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 91, 24 |
Conread position: | 17-159 |
Cow position: | chr13:30148781-30148640 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 88, 40 |
Conread position: | 18-135 |
Cow position: | chr13:23480801-23480683 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 97 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 90, 14 |
Conread position: | 18-155 |
Cow position: | chr13:52477870-52477727 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 112 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 18-156 |
Cow position: | chr13:48165964-48165826 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 45, 76 |
Conread position: | 18-157 |
Cow position: | chr13:15289143-15289000 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 43, 16 |
Conread position: | 18-157 |
Cow position: | chr13:37555097-37554952 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 18-158 |
Cow position: | chr13:6012945-6012804 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 107 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 18-158 |
Cow position: | chr13:6189825-6189678 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 18-158 |
Cow position: | chr13:17021948-17021803 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 116 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 37, 23 |
Conread position: | 18-159 |
Cow position: | chr13:151744-151886 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 7, 40 |
Conread position: | 18-159 |
Cow position: | chr13:13088811-13088952 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 119 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 40, 10 |
Conread position: | 18-159 |
Cow position: | chr13:14063745-14063598 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 121 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 43, 14 |
Conread position: | 18-159 |
Cow position: | chr13:17745031-17745171 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 21, 95 |
Conread position: | 18-159 |
Cow position: | chr13:18058474-18058327 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 21, 95 |
Conread position: | 18-159 |
Cow position: | chr13:21242299-21242161 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 118 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 39, 14 |
Conread position: | 18-159 |
Cow position: | chr13:22345499-22345351 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 118 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 43, 14 |
Conread position: | 18-159 |
Cow position: | chr13:23399544-23399689 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 118 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 43, 9 |
Conread position: | 18-159 |
Cow position: | chr13:23478675-23478825 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 119 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 18-159 |
Cow position: | chr13:23823254-23823111 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 43, 14 |
Conread position: | 18-159 |
Cow position: | chr13:25313379-25313226 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 121 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 7, 62 |
Conread position: | 18-159 |
Cow position: | chr13:28081490-28081645 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 122 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 18-159 |
Cow position: | chr13:28440761-28440612 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 21, 72 |
Conread position: | 18-159 |
Cow position: | chr13:37405487-37405634 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 14, 61 |
Conread position: | 18-159 |
Cow position: | chr13:53619775-53619927 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 117 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 18-159 |
Cow position: | chr13:54582648-54582797 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 18-159 |
Cow position: | chr13:55494748-55494603 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 120 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 7, 0 |
Conread position: | 18-159 |
Cow position: | chr13:57322924-57323069 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 18-159 |
Cow position: | chr13:57770208-57770063 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 19-135 |
Cow position: | chr13:15529470-15529350 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 12, 0 |
Conread position: | 19-159 |
Cow position: | chr13:21235892-21235748 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 42, 0 |
Conread position: | 20-158 |
Cow position: | chr13:58763833-58763696 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 111 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 11, 81 |
Conread position: | 20-159 |
Cow position: | chr13:20534677-20534819 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 83, 116 |
Conread position: | 20-159 |
Cow position: | chr13:20784373-20784513 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 117 |
Alignm E-value: | 6e-31 |
Alignm gaps (pig, cow): | 41, 12 |
Conread position: | 20-159 |
Cow position: | chr13:21288307-21288162 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 41, 12 |
Conread position: | 22-157 |
Cow position: | chr13:53573757-53573890 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 103 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 23-159 |
Cow position: | chr13:14644834-14644974 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 115 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 38, 9 |
Conread position: | 23-159 |
Cow position: | chr13:37614420-37614273 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 24-159 |
Cow position: | chr13:47651635-47651493 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 27-157 |
Cow position: | chr13:45073463-45073333 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 109 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 12, 79 |
Conread position: | 27-159 |
Cow position: | chr13:11808361-11808500 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 27-159 |
Cow position: | chr13:45439316-45439454 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 27-159 |
Cow position: | chr13:54389236-54389098 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 28-150 |
Cow position: | chr13:8450118-8450244 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 98 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-151 |
Cow position: | chr13:19883249-19883121 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 100 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-157 |
Cow position: | chr13:25061967-25062097 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 11, 79 |
Conread position: | 28-158 |
Cow position: | chr13:41474662-41474794 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 108 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 72, 12 |
Conread position: | 28-159 |
Cow position: | chr13:14782133-14782265 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 105 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 71, 37 |
Conread position: | 28-159 |
Cow position: | chr13:17569312-17569178 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 33, 62 |
Conread position: | 28-159 |
Cow position: | chr13:20288123-20288261 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-159 |
Cow position: | chr13:21426035-21425907 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 11, 108 |
Conread position: | 28-159 |
Cow position: | chr13:25817313-25817450 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-159 |
Cow position: | chr13:35526411-35526272 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 11, 35 |
Conread position: | 28-159 |
Cow position: | chr13:42200405-42200542 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 37-159 |
Cow position: | chr13:13265358-13265484 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 24, 85 |
Conread position: | 37-159 |
Cow position: | chr13:27726997-27727116 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 103 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 38-158 |
Cow position: | chr13:11565634-11565759 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr13:6951375-6951502 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 99 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 38-159 |
Cow position: | chr13:13320592-13320720 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 38-159 |
Cow position: | chr13:15257572-15257444 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 38-159 |
Cow position: | chr13:19393091-19393215 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 101 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 61, 27 |
Conread position: | 38-159 |
Cow position: | chr13:21170323-21170449 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 104 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr13:23795584-23795464 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 23, 62 |
Conread position: | 38-159 |
Cow position: | chr13:24585843-24585970 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr13:33854886-33854761 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 38-159 |
Cow position: | chr13:34261030-34261154 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 38-159 |
Cow position: | chr13:35557316-35557188 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 104 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr13:38035634-38035761 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 102 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 39-154 |
Cow position: | chr13:30809579-30809455 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 40-158 |
Cow position: | chr13:20821040-20820915 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 40-159 |
Cow position: | chr13:41806573-41806695 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 99 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 67, 25 |
Conread position: | 43-159 |
Cow position: | chr13:24369385-24369505 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 97 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 43-159 |
Cow position: | chr13:43479861-43479983 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 100 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 57-159 |
Cow position: | chr13:20154822-20154924 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 59-159 |
Cow position: | chr13:20666567-20666463 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 88 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 44, 0 |
Conread position: | 59-159 |
Cow position: | chr13:23478847-23478953 (view UCSC Genome Browser custom track) |
Alignm length: | 107 |
Alignm identity: | 90 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 68-159 |
Cow position: | chr13:16790041-16790132 (view UCSC Genome Browser custom track) |
Alignm length: | 92 |
Alignm identity: | 79 |
Alignm E-value: | 8e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.