Cow genome map

Conread name: rpigcf0_004787.y1

Conread position: 2-159
Cow position: chr22:21905696-21905530 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 126

Conread position: 3-158
Cow position: chr22:24890446-24890281 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 3-158
Cow position: chr22:44741293-44741136 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 106, 78

Conread position: 5-159
Cow position: chr22:25742749-25742890 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 6-157
Cow position: chr22:13951483-13951324 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 7-159
Cow position: chr22:43812222-43812379 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 32, 20

Conread position: 11-152
Cow position: chr22:24903807-24903658 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 13-159
Cow position: chr22:18838462-18838315 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 46, 14

Conread position: 15-155
Cow position: chr22:4373248-4373105 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 11, 0

Conread position: 17-159
Cow position: chr22:1501090-1500953 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 14, 24

Conread position: 17-159
Cow position: chr22:4563567-4563422 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 22, 85

Conread position: 17-159
Cow position: chr22:9735475-9735328 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 41, 10

Conread position: 17-159
Cow position: chr22:30684933-30684787 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 17-159
Cow position: chr22:33565884-33566035 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 10

Conread position: 18-156
Cow position: chr22:10122575-10122441 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 40, 14

Conread position: 18-156
Cow position: chr22:11131074-11130932 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 21

Conread position: 18-157
Cow position: chr22:12586730-12586589 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 21, 92

Conread position: 18-158
Cow position: chr22:3388932-3388804 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 114
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 18-158
Cow position: chr22:4060740-4060887 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 18-158
Cow position: chr22:10594820-10594668 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 120
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 18-159
Cow position: chr22:2201941-2201799 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 14

Conread position: 18-159
Cow position: chr22:3257459-3257603 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 64

Conread position: 18-159
Cow position: chr22:4357292-4357149 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 106

Conread position: 18-159
Cow position: chr22:6176078-6176227 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 43, 10

Conread position: 18-159
Cow position: chr22:7518761-7518614 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 14

Conread position: 18-159
Cow position: chr22:10295233-10295094 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 43, 20

Conread position: 18-159
Cow position: chr22:18259424-18259278 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 120

Conread position: 18-159
Cow position: chr22:22613307-22613165 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 41, 23

Conread position: 18-159
Cow position: chr22:24134113-24134267 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr22:25221698-25221839 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 23

Conread position: 18-159
Cow position: chr22:26189077-26188929 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 20

Conread position: 18-159
Cow position: chr22:29546845-29546698 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 43, 107

Conread position: 18-159
Cow position: chr22:33985599-33985744 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 42, 0

Conread position: 18-159
Cow position: chr22:45019443-45019587 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 14

Conread position: 22-158
Cow position: chr22:28357231-28357089 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 78, 0

Conread position: 22-159
Cow position: chr22:1304350-1304494 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 17, 126

Conread position: 22-159
Cow position: chr22:2184512-2184653 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 22-159
Cow position: chr22:27580219-27580355 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 13, 84

Conread position: 22-159
Cow position: chr22:42618200-42618059 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 12, 103

Conread position: 23-157
Cow position: chr22:16813998-16813857 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 23-158
Cow position: chr22:13891778-13891635 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 23-159
Cow position: chr22:12157644-12157785 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 25-159
Cow position: chr22:1105428-1105565 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 75, 7

Conread position: 27-159
Cow position: chr22:6720882-6721022 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 27-159
Cow position: chr22:10567520-10567655 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 33, 47

Conread position: 27-159
Cow position: chr22:17652631-17652494 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 34, 0

Conread position: 27-159
Cow position: chr22:38438958-38439098 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 12, 0

Conread position: 28-155
Cow position: chr22:14214172-14214303 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 28-158
Cow position: chr22:44717919-44717781 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 28-159
Cow position: chr22:1384271-1384141 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 80, 33

Conread position: 28-159
Cow position: chr22:6327574-6327710 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 28-159
Cow position: chr22:7584043-7584182 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 28-159
Cow position: chr22:11613625-11613483 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 28-159
Cow position: chr22:13957450-13957585 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 34, 14

Conread position: 28-159
Cow position: chr22:23249538-23249668 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 11, 81

Conread position: 28-159
Cow position: chr22:28804111-28803977 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 11, 81

Conread position: 28-159
Cow position: chr22:33948778-33948915 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 29-159
Cow position: chr22:15950193-15950327 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 31-158
Cow position: chr22:6359998-6360124 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 30, 69

Conread position: 32-151
Cow position: chr22:34632345-34632229 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 72

Conread position: 37-149
Cow position: chr22:27267743-27267629 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 95
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 24, 74

Conread position: 37-157
Cow position: chr22:29135144-29135019 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 38-152
Cow position: chr22:21527097-21526978 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 38-157
Cow position: chr22:12981537-12981664 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 38-157
Cow position: chr22:14178644-14178766 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 23, 74

Conread position: 38-158
Cow position: chr22:15567834-15567956 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 23, 78

Conread position: 38-158
Cow position: chr22:26945383-26945500 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 38-158
Cow position: chr22:33485437-33485559 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 38-159
Cow position: chr22:2109442-2109568 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 21, 0

Conread position: 38-159
Cow position: chr22:8357766-8357645 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 70, 44

Conread position: 38-159
Cow position: chr22:8447095-8446973 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 23, 70

Conread position: 38-159
Cow position: chr22:12315995-12315869 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 19, 0

Conread position: 38-159
Cow position: chr22:17852450-17852577 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 23, 98

Conread position: 38-159
Cow position: chr22:18145723-18145595 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr22:21041967-21042086 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 68, 16

Conread position: 38-159
Cow position: chr22:23675785-23675909 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr22:27171081-27171202 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 102
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 20, 78

Conread position: 38-159
Cow position: chr22:30818397-30818272 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 105
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 23, 99

Conread position: 38-159
Cow position: chr22:45808017-45807893 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 62, 112

Conread position: 39-159
Cow position: chr22:10532680-10532559 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 22, 69

Conread position: 43-158
Cow position: chr22:755670-755787 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 33, 22

Conread position: 43-159
Cow position: chr22:7882733-7882611 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 15, 50

Conread position: 43-159
Cow position: chr22:12902673-12902796 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 101
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 43-159
Cow position: chr22:19549024-19548914 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 96
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 43-159
Cow position: chr22:40789740-40789625 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 23, 30

Conread position: 57-159
Cow position: chr22:16655573-16655679 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 57-159
Cow position: chr22:26931027-26930921 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 88
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 59-159
Cow position: chr22:12446561-12446658 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 85
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 45, 0

Show alignments to all cow chromosomes.