Cow genome map

Conread name: rpigcf0_004787.y1

Conread position: 8-155
Cow position: chr27:31153819-31153669 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 92, 24

Conread position: 15-159
Cow position: chr27:15409289-15409142 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 90

Conread position: 17-152
Cow position: chr27:24358082-24358222 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 0

Conread position: 17-159
Cow position: chr27:299629-299486 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 14

Conread position: 17-159
Cow position: chr27:13204209-13204354 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 17-159
Cow position: chr27:21448074-21447935 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 44, 11

Conread position: 18-150
Cow position: chr27:21993952-21993818 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 40, 14

Conread position: 18-157
Cow position: chr27:10581280-10581427 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 43, 23

Conread position: 18-157
Cow position: chr27:22220294-22220446 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 18-158
Cow position: chr27:11133833-11133980 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 18-159
Cow position: chr27:1184430-1184283 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 18-159
Cow position: chr27:16704994-16705145 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 18-159
Cow position: chr27:17397706-17397560 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 18-159
Cow position: chr27:22035627-22035483 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 13, 94

Conread position: 18-159
Cow position: chr27:22547645-22547501 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 21, 95

Conread position: 18-159
Cow position: chr27:24223703-24223846 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 23

Conread position: 18-159
Cow position: chr27:26617160-26617303 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 48, 103

Conread position: 18-159
Cow position: chr27:31004685-31004829 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 21, 44

Conread position: 19-159
Cow position: chr27:2949568-2949431 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 45, 13

Conread position: 19-159
Cow position: chr27:23484962-23485106 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 42, 104

Conread position: 20-159
Cow position: chr27:16103558-16103705 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 37, 137

Conread position: 20-159
Cow position: chr27:23527748-23527607 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 119
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 38, 8

Conread position: 22-107
Cow position: chr27:4720376-4720292 (view UCSC Genome Browser custom track)
Alignm length: 86
Alignm identity: 75
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 22-159
Cow position: chr27:9253363-9253219 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 37, 0

Conread position: 22-159
Cow position: chr27:24693169-24693309 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 39, 10

Conread position: 22-159
Cow position: chr27:27055048-27055183 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 35, 14

Conread position: 24-159
Cow position: chr27:20828953-20828816 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 75, 108

Conread position: 28-149
Cow position: chr27:10867905-10867780 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 28-158
Cow position: chr27:15669019-15668878 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 28-159
Cow position: chr27:7412148-7412287 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 114
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 0

Conread position: 28-159
Cow position: chr27:18435375-18435239 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 32, 0

Conread position: 28-159
Cow position: chr27:19576569-19576429 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 28-159
Cow position: chr27:23560274-23560137 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 110
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 28-159
Cow position: chr27:28062440-28062304 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 29-159
Cow position: chr27:6319679-6319813 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 30, 0

Conread position: 29-159
Cow position: chr27:24952196-24952060 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 29-159
Cow position: chr27:26087076-26087210 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 29-159
Cow position: chr27:31210306-31210442 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 31, 110

Conread position: 30-159
Cow position: chr27:22150936-22150800 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 37-159
Cow position: chr27:20561352-20561476 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 24, 79

Conread position: 38-155
Cow position: chr27:20302341-20302457 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 96
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 22, 68

Conread position: 38-157
Cow position: chr27:26865343-26865218 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 99

Conread position: 38-159
Cow position: chr27:426735-426864 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr27:1067341-1067462 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 38-159
Cow position: chr27:6106472-6106598 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 38-159
Cow position: chr27:22171067-22171194 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 23, 57

Conread position: 38-159
Cow position: chr27:23452228-23452356 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr27:27450118-27449991 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr27:29494133-29494006 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 49

Conread position: 39-159
Cow position: chr27:29431242-29431363 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 98
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 60

Conread position: 43-158
Cow position: chr27:12459058-12459182 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 45-159
Cow position: chr27:31031239-31031349 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 61-159
Cow position: chr27:28478375-28478474 (view UCSC Genome Browser custom track)
Alignm length: 100
Alignm identity: 83
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 40, 0

Show alignments to all cow chromosomes.