Cow genome map
Conread name: | rpigcf0_004787.y1 |
Conread position: | 2-159 |
Cow position: | chr28:17740058-17739889 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 127 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 7-159 |
Cow position: | chr28:4016754-4016598 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 4e-32 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 8-158 |
Cow position: | chr28:10763115-10762962 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 118 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 23, 103 |
Conread position: | 14-159 |
Cow position: | chr28:30902340-30902193 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 119 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 46, 18 |
Conread position: | 16-159 |
Cow position: | chr28:12933517-12933663 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 17-157 |
Cow position: | chr28:5805875-5805736 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 117 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 92, 11 |
Conread position: | 17-157 |
Cow position: | chr28:8304460-8304316 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 17-159 |
Cow position: | chr28:7131874-7132021 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 117 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 18-138 |
Cow position: | chr28:4375413-4375535 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 102 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 43, 20 |
Conread position: | 18-158 |
Cow position: | chr28:5138781-5138923 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 115 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 21, 123 |
Conread position: | 18-158 |
Cow position: | chr28:8396537-8396403 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 115 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-158 |
Cow position: | chr28:11305419-11305565 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 118 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 21, 9 |
Conread position: | 18-159 |
Cow position: | chr28:3257208-3257055 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 117 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 18-159 |
Cow position: | chr28:3492568-3492717 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-159 |
Cow position: | chr28:4866360-4866506 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 117 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 18-159 |
Cow position: | chr28:5255087-5254941 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 18-159 |
Cow position: | chr28:7750803-7750949 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 18-159 |
Cow position: | chr28:11411322-11411467 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 112 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 26, 117 |
Conread position: | 18-159 |
Cow position: | chr28:11426331-11426474 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 13, 104 |
Conread position: | 18-159 |
Cow position: | chr28:21868675-21868524 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 119 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 18-159 |
Cow position: | chr28:24646797-24646658 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 111 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 90, 14 |
Conread position: | 18-159 |
Cow position: | chr28:29850608-29850748 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 45, 14 |
Conread position: | 19-159 |
Cow position: | chr28:6975447-6975308 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 12, 23 |
Conread position: | 19-159 |
Cow position: | chr28:7350865-7350721 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 116 |
Alignm E-value: | 1e-30 |
Alignm gaps (pig, cow): | 89, 0 |
Conread position: | 19-159 |
Cow position: | chr28:21263369-21263224 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 21, 8 |
Conread position: | 20-159 |
Cow position: | chr28:17948903-17949046 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 22-159 |
Cow position: | chr28:3746406-3746269 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 108 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 36, 19 |
Conread position: | 22-159 |
Cow position: | chr28:13474514-13474367 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 113 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 22-159 |
Cow position: | chr28:24238271-24238410 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 9, 74 |
Conread position: | 22-159 |
Cow position: | chr28:29416513-29416650 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 6e-25 |
Alignm gaps (pig, cow): | 36, 77 |
Conread position: | 27-158 |
Cow position: | chr28:8681229-8681362 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 12, 74 |
Conread position: | 27-159 |
Cow position: | chr28:9109419-9109283 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 108 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 12, 107 |
Conread position: | 28-137 |
Cow position: | chr28:25057162-25057051 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 28-150 |
Cow position: | chr28:4071165-4071042 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 103 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-157 |
Cow position: | chr28:16918967-16919100 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 5e-24 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-158 |
Cow position: | chr28:8787746-8787607 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 28-159 |
Cow position: | chr28:4013290-4013151 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 113 |
Alignm E-value: | 7e-27 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-159 |
Cow position: | chr28:10978044-10977909 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 33, 107 |
Conread position: | 28-159 |
Cow position: | chr28:17943930-17943797 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 104 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 28-159 |
Cow position: | chr28:19564027-19564161 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 108 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 11, 95 |
Conread position: | 28-159 |
Cow position: | chr28:26960705-26960842 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 11, 97 |
Conread position: | 28-159 |
Cow position: | chr28:30937477-30937602 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 29-158 |
Cow position: | chr28:21845156-21845025 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 108 |
Alignm E-value: | 3e-30 |
Alignm gaps (pig, cow): | 68, 0 |
Conread position: | 38-157 |
Cow position: | chr28:5204381-5204264 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 93 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-158 |
Cow position: | chr28:11422623-11422748 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 100 |
Alignm E-value: | 4e-22 |
Alignm gaps (pig, cow): | 71, 23 |
Conread position: | 38-159 |
Cow position: | chr28:3678555-3678429 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 106 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr28:10890546-10890668 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 105 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 21, 70 |
Conread position: | 38-159 |
Cow position: | chr28:11987359-11987238 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-159 |
Cow position: | chr28:12055597-12055476 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 94 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-159 |
Cow position: | chr28:16177446-16177321 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 38-159 |
Cow position: | chr28:21008475-21008599 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 98 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr28:22371479-22371600 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 99 |
Alignm E-value: | 8e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 38-159 |
Cow position: | chr28:22813444-22813325 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 23, 63 |
Conread position: | 39-159 |
Cow position: | chr28:10615755-10615879 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 4e-21 |
Alignm gaps (pig, cow): | 64, 95 |
Conread position: | 43-159 |
Cow position: | chr28:3914896-3914784 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 100 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 18, 52 |
Conread position: | 43-159 |
Cow position: | chr28:16346347-16346465 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 96 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 17, 81 |
Conread position: | 44-159 |
Cow position: | chr28:24082460-24082337 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 102 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 57-159 |
Cow position: | chr28:4588489-4588385 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 90 |
Alignm E-value: | 6e-26 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 57-159 |
Cow position: | chr28:4876612-4876509 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 86 |
Alignm E-value: | 5e-23 |
Alignm gaps (pig, cow): | 55, 0 |
Conread position: | 57-159 |
Cow position: | chr28:16879742-16879640 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 88 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.