Cow genome map

Conread name: rpigcf0_004787.y1

Conread position: 2-159
Cow position: chr28:17740058-17739889 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 7-159
Cow position: chr28:4016754-4016598 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 22, 0

Conread position: 8-158
Cow position: chr28:10763115-10762962 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 23, 103

Conread position: 14-159
Cow position: chr28:30902340-30902193 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 46, 18

Conread position: 16-159
Cow position: chr28:12933517-12933663 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 17-157
Cow position: chr28:5805875-5805736 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 117
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 92, 11

Conread position: 17-157
Cow position: chr28:8304460-8304316 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 22, 0

Conread position: 17-159
Cow position: chr28:7131874-7132021 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 41, 0

Conread position: 18-138
Cow position: chr28:4375413-4375535 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 43, 20

Conread position: 18-158
Cow position: chr28:5138781-5138923 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 21, 123

Conread position: 18-158
Cow position: chr28:8396537-8396403 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 115
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 18-158
Cow position: chr28:11305419-11305565 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 21, 9

Conread position: 18-159
Cow position: chr28:3257208-3257055 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr28:3492568-3492717 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 18-159
Cow position: chr28:4866360-4866506 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 16, 0

Conread position: 18-159
Cow position: chr28:5255087-5254941 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 43, 0

Conread position: 18-159
Cow position: chr28:7750803-7750949 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 18-159
Cow position: chr28:11411322-11411467 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 117

Conread position: 18-159
Cow position: chr28:11426331-11426474 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 13, 104

Conread position: 18-159
Cow position: chr28:21868675-21868524 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 21, 0

Conread position: 18-159
Cow position: chr28:24646797-24646658 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 90, 14

Conread position: 18-159
Cow position: chr28:29850608-29850748 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 45, 14

Conread position: 19-159
Cow position: chr28:6975447-6975308 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 12, 23

Conread position: 19-159
Cow position: chr28:7350865-7350721 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 116
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 89, 0

Conread position: 19-159
Cow position: chr28:21263369-21263224 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 8

Conread position: 20-159
Cow position: chr28:17948903-17949046 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 40, 0

Conread position: 22-159
Cow position: chr28:3746406-3746269 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 36, 19

Conread position: 22-159
Cow position: chr28:13474514-13474367 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 22-159
Cow position: chr28:24238271-24238410 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 74

Conread position: 22-159
Cow position: chr28:29416513-29416650 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 77

Conread position: 27-158
Cow position: chr28:8681229-8681362 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 74

Conread position: 27-159
Cow position: chr28:9109419-9109283 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 107

Conread position: 28-137
Cow position: chr28:25057162-25057051 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 28-150
Cow position: chr28:4071165-4071042 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 103
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 28-157
Cow position: chr28:16918967-16919100 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 11, 0

Conread position: 28-158
Cow position: chr28:8787746-8787607 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 28-159
Cow position: chr28:4013290-4013151 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 28-159
Cow position: chr28:10978044-10977909 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 33, 107

Conread position: 28-159
Cow position: chr28:17943930-17943797 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 104
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 64, 0

Conread position: 28-159
Cow position: chr28:19564027-19564161 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 95

Conread position: 28-159
Cow position: chr28:26960705-26960842 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 97

Conread position: 28-159
Cow position: chr28:30937477-30937602 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 29-158
Cow position: chr28:21845156-21845025 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 108
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 68, 0

Conread position: 38-157
Cow position: chr28:5204381-5204264 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 38-158
Cow position: chr28:11422623-11422748 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 71, 23

Conread position: 38-159
Cow position: chr28:3678555-3678429 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 106
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr28:10890546-10890668 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 105
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 21, 70

Conread position: 38-159
Cow position: chr28:11987359-11987238 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 38-159
Cow position: chr28:12055597-12055476 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 94
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 38-159
Cow position: chr28:16177446-16177321 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 38-159
Cow position: chr28:21008475-21008599 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 38-159
Cow position: chr28:22371479-22371600 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 99
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 38-159
Cow position: chr28:22813444-22813325 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 23, 63

Conread position: 39-159
Cow position: chr28:10615755-10615879 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 95

Conread position: 43-159
Cow position: chr28:3914896-3914784 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 100
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 18, 52

Conread position: 43-159
Cow position: chr28:16346347-16346465 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 96
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 81

Conread position: 44-159
Cow position: chr28:24082460-24082337 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 57-159
Cow position: chr28:4588489-4588385 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 90
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 51, 0

Conread position: 57-159
Cow position: chr28:4876612-4876509 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 86
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 55, 0

Conread position: 57-159
Cow position: chr28:16879742-16879640 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 88
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.