Cow genome map
Conread name: | rpigcf0_004787.y1 |
Conread position: | 8-158 |
Cow position: | chr4:17186135-17186295 (view UCSC Genome Browser custom track) |
Alignm length: | 161 |
Alignm identity: | 122 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 54, 0 |
Conread position: | 12-159 |
Cow position: | chr4:19578592-19578442 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 124 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 88, 63 |
Conread position: | 13-159 |
Cow position: | chr4:59001928-59002085 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 126 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 14-150 |
Cow position: | chr4:34919067-34919210 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 14-159 |
Cow position: | chr4:2770278-2770128 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 114 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 16-159 |
Cow position: | chr4:22331326-22331179 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 112 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 11, 46 |
Conread position: | 17-151 |
Cow position: | chr4:53134804-53134666 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 113 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 15, 86 |
Conread position: | 17-155 |
Cow position: | chr4:51851414-51851271 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 44, 10 |
Conread position: | 17-159 |
Cow position: | chr4:14965017-14964883 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 114 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 17-159 |
Cow position: | chr4:68590970-68590826 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 120 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 44, 21 |
Conread position: | 18-152 |
Cow position: | chr4:12713832-12713965 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 109 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 91, 21 |
Conread position: | 18-152 |
Cow position: | chr4:12716702-12716834 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 91, 21 |
Conread position: | 18-154 |
Cow position: | chr4:61193144-61193280 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 113 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 40, 20 |
Conread position: | 18-156 |
Cow position: | chr4:28701544-28701416 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 113 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-159 |
Cow position: | chr4:4084908-4085056 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 115 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 27, 40 |
Conread position: | 18-159 |
Cow position: | chr4:21506763-21506901 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 114 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 14, 27 |
Conread position: | 18-159 |
Cow position: | chr4:30944157-30944009 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 117 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 18-159 |
Cow position: | chr4:33838599-33838748 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 117 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 18-159 |
Cow position: | chr4:34510034-34509895 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 115 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 21, 81 |
Conread position: | 18-159 |
Cow position: | chr4:36290825-36290679 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 43, 0 |
Conread position: | 18-159 |
Cow position: | chr4:37915134-37915281 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 119 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 15, 0 |
Conread position: | 18-159 |
Cow position: | chr4:38156891-38157033 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 7, 23 |
Conread position: | 18-159 |
Cow position: | chr4:39007697-39007559 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 18-159 |
Cow position: | chr4:42608942-42608793 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 124 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 8, 15 |
Conread position: | 18-159 |
Cow position: | chr4:43579211-43579358 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 18-159 |
Cow position: | chr4:53126305-53126166 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 106 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 48, 37 |
Conread position: | 18-159 |
Cow position: | chr4:56395720-56395567 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 116 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 18-159 |
Cow position: | chr4:61887840-61887691 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 118 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 43, 10 |
Conread position: | 18-159 |
Cow position: | chr4:65463312-65463454 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 43, 22 |
Conread position: | 19-158 |
Cow position: | chr4:479598-479736 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 9, 40 |
Conread position: | 19-159 |
Cow position: | chr4:61524628-61524486 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 114 |
Alignm E-value: | 9e-23 |
Alignm gaps (pig, cow): | 39, 8 |
Conread position: | 20-159 |
Cow position: | chr4:46404709-46404853 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 118 |
Alignm E-value: | 6e-29 |
Alignm gaps (pig, cow): | 19, 7 |
Conread position: | 21-158 |
Cow position: | chr4:26659500-26659356 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 40, 0 |
Conread position: | 21-159 |
Cow position: | chr4:1026035-1026182 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 114 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 21-159 |
Cow position: | chr4:4318957-4319097 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 110 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 39, 17 |
Conread position: | 22-158 |
Cow position: | chr4:30250084-30250215 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 113 |
Alignm E-value: | 6e-30 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 22-159 |
Cow position: | chr4:19090086-19089952 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 107 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 75, 0 |
Conread position: | 22-159 |
Cow position: | chr4:56805366-56805231 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 103 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 24-158 |
Cow position: | chr4:34699844-34699978 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 110 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 15, 79 |
Conread position: | 26-148 |
Cow position: | chr4:5276263-5276392 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 104 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 82, 0 |
Conread position: | 27-155 |
Cow position: | chr4:3688123-3687987 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 27-158 |
Cow position: | chr4:61391041-61391171 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 104 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 34, 14 |
Conread position: | 27-159 |
Cow position: | chr4:19504116-19503983 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 110 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 34, 64 |
Conread position: | 27-159 |
Cow position: | chr4:30769226-30769089 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 34, 109 |
Conread position: | 27-159 |
Cow position: | chr4:47048308-47048172 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 112 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 27-159 |
Cow position: | chr4:49880511-49880640 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 106 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 34, 68 |
Conread position: | 27-159 |
Cow position: | chr4:60302821-60302952 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 37, 73 |
Conread position: | 28-158 |
Cow position: | chr4:39569390-39569259 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 33, 71 |
Conread position: | 28-159 |
Cow position: | chr4:10558730-10558591 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-159 |
Cow position: | chr4:13194150-13194019 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 106 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 85, 33 |
Conread position: | 28-159 |
Cow position: | chr4:22215320-22215456 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-159 |
Cow position: | chr4:38935553-38935414 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 11, 121 |
Conread position: | 28-159 |
Cow position: | chr4:42423608-42423750 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 112 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 28-159 |
Cow position: | chr4:54785737-54785874 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 105 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-159 |
Cow position: | chr4:59015774-59015643 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 105 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 11, 44 |
Conread position: | 28-159 |
Cow position: | chr4:68358519-68358385 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 34, 58 |
Conread position: | 29-152 |
Cow position: | chr4:62920689-62920810 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 97 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 13, 33 |
Conread position: | 30-159 |
Cow position: | chr4:27657163-27657031 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 111 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 31-159 |
Cow position: | chr4:41907392-41907527 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 108 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 31-159 |
Cow position: | chr4:55694360-55694229 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 99 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 32-159 |
Cow position: | chr4:12908558-12908428 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 5e-28 |
Alignm gaps (pig, cow): | 29, 0 |
Conread position: | 32-159 |
Cow position: | chr4:23846865-23846996 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 103 |
Alignm E-value: | 8e-22 |
Alignm gaps (pig, cow): | 29, 100 |
Conread position: | 34-158 |
Cow position: | chr4:36070889-36070758 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 36-159 |
Cow position: | chr4:27425886-27425766 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 103 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 69, 23 |
Conread position: | 38-158 |
Cow position: | chr4:21275430-21275545 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 96 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 38-158 |
Cow position: | chr4:28854093-28854219 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 23, 16 |
Conread position: | 38-159 |
Cow position: | chr4:85877-85749 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 105 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 38-159 |
Cow position: | chr4:4320810-4320936 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr4:19745053-19744930 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 22, 63 |
Conread position: | 38-159 |
Cow position: | chr4:22482503-22482380 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 23, 63 |
Conread position: | 38-159 |
Cow position: | chr4:32602009-32601889 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 23, 68 |
Conread position: | 38-159 |
Cow position: | chr4:51083157-51083283 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 23, 86 |
Conread position: | 39-158 |
Cow position: | chr4:3519601-3519477 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 42-159 |
Cow position: | chr4:60506455-60506327 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 43-152 |
Cow position: | chr4:64488729-64488621 (view UCSC Genome Browser custom track) |
Alignm length: | 110 |
Alignm identity: | 87 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 43-158 |
Cow position: | chr4:19333561-19333442 (view UCSC Genome Browser custom track) |
Alignm length: | 120 |
Alignm identity: | 97 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 65, 0 |
Conread position: | 43-159 |
Cow position: | chr4:17851082-17851198 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 96 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 50, 38 |
Conread position: | 43-159 |
Cow position: | chr4:40414450-40414573 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 16, 0 |
Conread position: | 58-159 |
Cow position: | chr4:68387948-68387847 (view UCSC Genome Browser custom track) |
Alignm length: | 102 |
Alignm identity: | 85 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 59-159 |
Cow position: | chr4:34983344-34983444 (view UCSC Genome Browser custom track) |
Alignm length: | 101 |
Alignm identity: | 83 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.