Cow genome map
Conread name: | rpigcf0_004787.y1 |
Conread position: | 7-159 |
Cow position: | chr5:15471167-15471017 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 111 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 90, 0 |
Conread position: | 13-159 |
Cow position: | chr5:31964788-31964652 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 13-159 |
Cow position: | chr5:49207085-49207239 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 115 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 14-159 |
Cow position: | chr5:30276928-30276778 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 119 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 46, 17 |
Conread position: | 16-159 |
Cow position: | chr5:45845447-45845603 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 122 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 7, 126 |
Conread position: | 17-159 |
Cow position: | chr5:40109720-40109580 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 116 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 44, 21 |
Conread position: | 17-159 |
Cow position: | chr5:56028307-56028453 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 116 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 44, 15 |
Conread position: | 17-159 |
Cow position: | chr5:56327487-56327631 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 108 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 18-156 |
Cow position: | chr5:19626811-19626669 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 122 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 43, 23 |
Conread position: | 18-156 |
Cow position: | chr5:52849320-52849176 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 8, 0 |
Conread position: | 18-158 |
Cow position: | chr5:26548906-26549051 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 121 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 40, 14 |
Conread position: | 18-159 |
Cow position: | chr5:4728307-4728162 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 43, 75 |
Conread position: | 18-159 |
Cow position: | chr5:12434772-12434631 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 43, 14 |
Conread position: | 18-159 |
Cow position: | chr5:16668926-16668785 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 79, 31 |
Conread position: | 18-159 |
Cow position: | chr5:16893543-16893683 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 43, 21 |
Conread position: | 18-159 |
Cow position: | chr5:17537440-17537585 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 18-159 |
Cow position: | chr5:22242536-22242677 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 43, 67 |
Conread position: | 18-159 |
Cow position: | chr5:26147827-26147679 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 114 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 21, 26 |
Conread position: | 18-159 |
Cow position: | chr5:34288014-34288165 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 120 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 18-159 |
Cow position: | chr5:38833352-38833209 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 81, 69 |
Conread position: | 18-159 |
Cow position: | chr5:44446637-44446777 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 43, 82 |
Conread position: | 18-159 |
Cow position: | chr5:49474317-49474457 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 42, 14 |
Conread position: | 18-159 |
Cow position: | chr5:57074099-57074243 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 91, 39 |
Conread position: | 18-159 |
Cow position: | chr5:60207943-60207796 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 114 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 43, 105 |
Conread position: | 18-159 |
Cow position: | chr5:66287180-66287033 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 116 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 21, 9 |
Conread position: | 18-159 |
Cow position: | chr5:74050060-74049912 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 116 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 43, 9 |
Conread position: | 19-138 |
Cow position: | chr5:63940216-63940339 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 12, 70 |
Conread position: | 19-158 |
Cow position: | chr5:35190342-35190199 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 120 |
Alignm E-value: | 3e-32 |
Alignm gaps (pig, cow): | 42, 13 |
Conread position: | 19-159 |
Cow position: | chr5:17105080-17104938 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 114 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 42, 13 |
Conread position: | 19-159 |
Cow position: | chr5:52192202-52192341 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 109 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 91, 13 |
Conread position: | 19-159 |
Cow position: | chr5:70591777-70591642 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 109 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 19-159 |
Cow position: | chr5:74643445-74643590 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 115 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 20-159 |
Cow position: | chr5:21721240-21721382 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 119 |
Alignm E-value: | 9e-33 |
Alignm gaps (pig, cow): | 88, 20 |
Conread position: | 22-158 |
Cow position: | chr5:70572591-70572459 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 39, 10 |
Conread position: | 22-159 |
Cow position: | chr5:4981682-4981538 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 22-159 |
Cow position: | chr5:30253974-30253829 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 113 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 39, 0 |
Conread position: | 22-159 |
Cow position: | chr5:60100697-60100558 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 9, 116 |
Conread position: | 22-159 |
Cow position: | chr5:60154002-60153863 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 9, 116 |
Conread position: | 22-159 |
Cow position: | chr5:64175895-64176038 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 24-159 |
Cow position: | chr5:35394207-35394345 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 37, 0 |
Conread position: | 25-159 |
Cow position: | chr5:30303111-30302979 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 109 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 36, 7 |
Conread position: | 25-159 |
Cow position: | chr5:41165313-41165176 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 106 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 26-158 |
Cow position: | chr5:52029634-52029493 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 112 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 27-159 |
Cow position: | chr5:14000869-14000733 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 104 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 13, 0 |
Conread position: | 27-159 |
Cow position: | chr5:29599323-29599458 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 115 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 27-159 |
Cow position: | chr5:46540831-46540968 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 112 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 27-159 |
Cow position: | chr5:57497197-57497336 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 108 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 27-159 |
Cow position: | chr5:58401794-58401657 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 32, 0 |
Conread position: | 28-154 |
Cow position: | chr5:66339301-66339168 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 103 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-157 |
Cow position: | chr5:69383482-69383345 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 102 |
Conread position: | 28-159 |
Cow position: | chr5:6245437-6245575 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-159 |
Cow position: | chr5:21617684-21617546 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 108 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-159 |
Cow position: | chr5:25462312-25462176 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 28-159 |
Cow position: | chr5:34562238-34562105 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 11, 55 |
Conread position: | 28-159 |
Cow position: | chr5:34787801-34787662 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 110 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 28-159 |
Cow position: | chr5:46512540-46512681 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 111 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-159 |
Cow position: | chr5:48104488-48104349 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 108 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 28-159 |
Cow position: | chr5:50824811-50824680 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 33, 82 |
Conread position: | 28-159 |
Cow position: | chr5:51298487-51298625 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 110 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 28-159 |
Cow position: | chr5:64061242-64061107 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 105 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 29-159 |
Cow position: | chr5:3582782-3582648 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 32-158 |
Cow position: | chr5:6876741-6876877 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 106 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 32-159 |
Cow position: | chr5:55232599-55232726 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 101 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 96, 26 |
Conread position: | 37-159 |
Cow position: | chr5:22795425-22795302 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 96 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 26, 55 |
Conread position: | 38-143 |
Cow position: | chr5:12654691-12654802 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 93 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-150 |
Cow position: | chr5:18706173-18706064 (view UCSC Genome Browser custom track) |
Alignm length: | 115 |
Alignm identity: | 95 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 21, 59 |
Conread position: | 38-155 |
Cow position: | chr5:21829082-21828959 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 100 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 70, 0 |
Conread position: | 38-157 |
Cow position: | chr5:56548784-56548661 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 101 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 22, 85 |
Conread position: | 38-158 |
Cow position: | chr5:18579107-18578981 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 101 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 38-158 |
Cow position: | chr5:40102530-40102651 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 96 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 38-158 |
Cow position: | chr5:44734509-44734636 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr5:34918561-34918434 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 106 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr5:37253641-37253517 (view UCSC Genome Browser custom track) |
Alignm length: | 125 |
Alignm identity: | 103 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr5:46479029-46479154 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 100 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 38-159 |
Cow position: | chr5:51289383-51289506 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 23, 55 |
Conread position: | 38-159 |
Cow position: | chr5:60523945-60523820 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 104 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 23, 0 |
Conread position: | 38-159 |
Cow position: | chr5:60948350-60948220 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 39-146 |
Cow position: | chr5:44836753-44836643 (view UCSC Genome Browser custom track) |
Alignm length: | 111 |
Alignm identity: | 91 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 39-159 |
Cow position: | chr5:18289335-18289210 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 98 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 43-157 |
Cow position: | chr5:17554822-17554941 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 98 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 18, 103 |
Conread position: | 43-159 |
Cow position: | chr5:45397778-45397657 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 101 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 18, 0 |
Conread position: | 44-159 |
Cow position: | chr5:72006285-72006402 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 92 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 46-138 |
Cow position: | chr5:54425658-54425564 (view UCSC Genome Browser custom track) |
Alignm length: | 95 |
Alignm identity: | 80 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 47-159 |
Cow position: | chr5:69461541-69461424 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 54, 113 |
Conread position: | 50-157 |
Cow position: | chr5:71724492-71724389 (view UCSC Genome Browser custom track) |
Alignm length: | 108 |
Alignm identity: | 88 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 47, 0 |
Conread position: | 57-157 |
Cow position: | chr5:57686545-57686647 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 9e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 57-159 |
Cow position: | chr5:47335221-47335116 (view UCSC Genome Browser custom track) |
Alignm length: | 106 |
Alignm identity: | 87 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 52, 0 |
Conread position: | 57-159 |
Cow position: | chr5:50942966-50943069 (view UCSC Genome Browser custom track) |
Alignm length: | 104 |
Alignm identity: | 84 |
Alignm E-value: | 8e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Show alignments to all cow chromosomes.