Cow genome map
| Conread name: | rpigcf0_004928.y1 |
| Conread position: | 59-291 |
| Cow position: | chr16:49097946-49097714 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 18, 52 |
| Conread position: | 78-229 |
| Cow position: | chr16:7179077-7178925 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 78-233 |
| Cow position: | chr16:50503192-50503042 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 133, 46 |
| Conread position: | 80-254 |
| Cow position: | chr16:24024136-24023963 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 6, 67 |
| Conread position: | 84-221 |
| Cow position: | chr16:50080762-50080627 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 73, 46 |
| Conread position: | 84-270 |
| Cow position: | chr16:51577587-51577773 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 54, 107 |
| Conread position: | 90-255 |
| Cow position: | chr16:56224413-56224249 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 28, 16 |
| Conread position: | 95-272 |
| Cow position: | chr16:10693597-10693771 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 119, 97 |
| Conread position: | 100-241 |
| Cow position: | chr16:18054169-18054026 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 20, 82 |
| Conread position: | 104-280 |
| Cow position: | chr16:40523381-40523200 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 104-408 |
| Cow position: | chr16:49769474-49769783 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 236 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 115 |
| Conread position: | 106-301 |
| Cow position: | chr16:50544458-50544659 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 119-236 |
| Cow position: | chr16:31115338-31115455 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 130-421 |
| Cow position: | chr16:44523861-44524151 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 29 |
| Conread position: | 141-347 |
| Cow position: | chr16:52026497-52026291 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 145 |
| Conread position: | 164-314 |
| Cow position: | chr16:56599239-56599393 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 164-361 |
| Cow position: | chr16:18287864-18288061 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 14, 33 |
| Conread position: | 236-420 |
| Cow position: | chr16:18290688-18290511 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 46, 83 |
| Conread position: | 251-376 |
| Cow position: | chr16:35411842-35411968 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 103 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 251-386 |
| Cow position: | chr16:19261698-19261835 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 109 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 283-481 |
| Cow position: | chr16:3886977-3887161 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 68, 0 |
Show alignments to all cow chromosomes.