Cow genome map


           Conread name:
           rpigcf0_004928.y1
        

               Conread position:
               51-236
               

               Cow position:
               chr19:5345744-5345935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               22, 0
               

               Conread position:
               76-204
               

               Cow position:
               chr19:28468465-28468593 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               99
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               88-492
               

               Cow position:
               chr19:45594266-45593867 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               120, 256
               

               Conread position:
               100-241
               

               Cow position:
               chr19:34206271-34206413 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               66, 91
               

               Conread position:
               100-274
               

               Cow position:
               chr19:23256447-23256272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               91, 159
               

               Conread position:
               104-281
               

               Cow position:
               chr19:8450654-8450832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               71, 115
               

               Conread position:
               142-337
               

               Cow position:
               chr19:29087783-29087978 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               160
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               51, 27
               

               Conread position:
               164-326
               

               Cow position:
               chr19:19767412-19767243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 56
               

               Conread position:
               165-337
               

               Cow position:
               chr19:15944145-15943974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               7, 55
               

               Conread position:
               251-517
               

               Cow position:
               chr19:27830041-27830318 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               13, 139
               

               Conread position:
               251-520
               

               Cow position:
               chr19:6485290-6485021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               198
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               27, 109
               

               Conread position:
               286-412
               

               Cow position:
               chr19:17221639-17221511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               101
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               84, 0
               
Show alignments to all cow chromosomes.