Cow genome map


           Conread name:
           rpigcf0_004928.y1
        

               Conread position:
               71-212
               

               Cow position:
               chr27:28124173-28124313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               77-270
               

               Cow position:
               chr27:25387605-25387411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               131, 113
               

               Conread position:
               77-274
               

               Cow position:
               chr27:31216450-31216644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               128, 113
               

               Conread position:
               80-348
               

               Cow position:
               chr27:22727279-22727549 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               200
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               26, 9
               

               Conread position:
               84-278
               

               Cow position:
               chr27:21161523-21161708 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               128, 57
               

               Conread position:
               84-280
               

               Cow position:
               chr27:3514893-3514696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               21, 91
               

               Conread position:
               90-249
               

               Cow position:
               chr27:26447963-26448127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-25
               

               Alignm gaps (pig, cow):
               84, 133
               

               Conread position:
               99-348
               

               Cow position:
               chr27:27687988-27688229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               113, 119
               

               Conread position:
               100-234
               

               Cow position:
               chr27:13935361-13935497 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               105, 131
               

               Conread position:
               106-477
               

               Cow position:
               chr27:26447637-26447278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               376
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               174, 216
               

               Conread position:
               106-482
               

               Cow position:
               chr27:5629350-5628994 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               119, 151
               

               Conread position:
               130-348
               

               Cow position:
               chr27:4474661-4474440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               168
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               126, 138
               
Show alignments to all cow chromosomes.