Cow genome map
| Conread name: | rpigcf0_004928.y1 |
| Conread position: | 68-444 |
| Cow position: | chr3:19247729-19247366 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 5 |
| Conread position: | 81-232 |
| Cow position: | chr3:83964657-83964807 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 53, 113 |
| Conread position: | 83-292 |
| Cow position: | chr3:29084044-29084254 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 26 |
| Conread position: | 84-235 |
| Cow position: | chr3:24920780-24920628 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 125, 0 |
| Conread position: | 84-236 |
| Cow position: | chr3:60026203-60026354 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 120, 63 |
| Conread position: | 84-443 |
| Cow position: | chr3:69221056-69220711 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 200, 57 |
| Conread position: | 84-477 |
| Cow position: | chr3:27387387-27387758 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 293 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 123 |
| Conread position: | 85-256 |
| Cow position: | chr3:9005535-9005364 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 130 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 49, 22 |
| Conread position: | 94-443 |
| Cow position: | chr3:68543482-68543834 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 273 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 140, 100 |
| Conread position: | 106-238 |
| Cow position: | chr3:61962544-61962673 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 117-336 |
| Cow position: | chr3:51413569-51413342 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 173 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 119-336 |
| Cow position: | chr3:26797510-26797724 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 94, 68 |
| Conread position: | 146-336 |
| Cow position: | chr3:26846163-26845969 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 24, 74 |
| Conread position: | 147-326 |
| Cow position: | chr3:84871798-84871983 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 75 |
| Conread position: | 164-337 |
| Cow position: | chr3:61462462-61462638 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 8, 172 |
| Conread position: | 165-337 |
| Cow position: | chr3:548553-548379 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 169-336 |
| Cow position: | chr3:47749213-47749387 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 239-371 |
| Cow position: | chr3:19236089-19236223 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 108 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 251-376 |
| Cow position: | chr3:7865488-7865364 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 46, 69 |
| Conread position: | 251-376 |
| Cow position: | chr3:45839791-45839665 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 44 |
| Conread position: | 272-409 |
| Cow position: | chr3:11136609-11136742 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 108 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 283-442 |
| Cow position: | chr3:7840237-7840081 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 283-520 |
| Cow position: | chr3:63271010-63270767 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 167, 130 |
| Conread position: | 286-423 |
| Cow position: | chr3:23938256-23938399 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
Show alignments to all cow chromosomes.