Cow genome map
| Conread name: | rpigcf0_004928.y1 |
| Conread position: | 73-293 |
| Cow position: | chr5:75183377-75183596 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 136, 101 |
| Conread position: | 74-270 |
| Cow position: | chr5:43791581-43791776 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 23, 110 |
| Conread position: | 81-475 |
| Cow position: | chr5:19004751-19004360 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 307 |
| Conread position: | 84-252 |
| Cow position: | chr5:56621808-56621639 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 124, 109 |
| Conread position: | 84-337 |
| Cow position: | chr5:56635179-56634918 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 32, 8 |
| Conread position: | 84-408 |
| Cow position: | chr5:45222192-45221869 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 192, 172 |
| Conread position: | 84-436 |
| Cow position: | chr5:27991411-27991058 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 196, 105 |
| Conread position: | 84-520 |
| Cow position: | chr5:22847461-22847026 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 195, 60 |
| Conread position: | 85-196 |
| Cow position: | chr5:2267377-2267488 (view UCSC Genome Browser custom track) |
| Alignm length: | 112 |
| Alignm identity: | 93 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 90-444 |
| Cow position: | chr5:48009019-48008688 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 139, 91 |
| Conread position: | 95-217 |
| Cow position: | chr5:30643810-30643687 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 100 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 110, 95 |
| Conread position: | 95-241 |
| Cow position: | chr5:60971744-60971598 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 110, 95 |
| Conread position: | 98-267 |
| Cow position: | chr5:55715568-55715398 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 107, 92 |
| Conread position: | 100-348 |
| Cow position: | chr5:43660158-43659907 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 74, 46 |
| Conread position: | 122-348 |
| Cow position: | chr5:44114150-44114377 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 109, 91 |
| Conread position: | 148-381 |
| Cow position: | chr5:23587432-23587673 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 148-389 |
| Cow position: | chr5:67998125-67998362 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 102 |
| Conread position: | 158-380 |
| Cow position: | chr5:17560638-17560417 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 170 |
| Conread position: | 161-337 |
| Cow position: | chr5:51577173-51576994 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-29 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 202-421 |
| Cow position: | chr5:75865281-75865059 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 84, 45 |
| Conread position: | 251-467 |
| Cow position: | chr5:47997349-47997141 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 171 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 33, 108 |
| Conread position: | 251-515 |
| Cow position: | chr5:8763391-8763681 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 209 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 31, 149 |
| Conread position: | 251-520 |
| Cow position: | chr5:18778143-18777863 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 29, 52 |
| Conread position: | 279-520 |
| Cow position: | chr5:22173169-22172935 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 183 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 165, 108 |
| Conread position: | 283-405 |
| Cow position: | chr5:67840085-67840204 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 284-444 |
| Cow position: | chr5:31568597-31568443 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.