Cow genome map
| Conread name: | rpigcf0_004928.y1 |
| Conread position: | 73-348 |
| Cow position: | chr6:20675654-20675917 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 190 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 101, 142 |
| Conread position: | 80-214 |
| Cow position: | chr6:980506-980370 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 6, 113 |
| Conread position: | 82-236 |
| Cow position: | chr6:5096982-5097139 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 52, 109 |
| Conread position: | 84-265 |
| Cow position: | chr6:10428494-10428313 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 8, 107 |
| Conread position: | 84-349 |
| Cow position: | chr6:2869357-2869624 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 201 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 89, 133 |
| Conread position: | 84-361 |
| Cow position: | chr6:43751887-43752167 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 208 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 94, 135 |
| Conread position: | 84-444 |
| Cow position: | chr6:5668712-5668368 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 98 |
| Conread position: | 85-219 |
| Cow position: | chr6:556172-556038 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 91, 80 |
| Conread position: | 85-256 |
| Cow position: | chr6:12562023-12561851 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 37, 106 |
| Conread position: | 85-361 |
| Cow position: | chr6:32975383-32975110 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 128, 76 |
| Conread position: | 93-486 |
| Cow position: | chr6:16550420-16550801 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 45 |
| Conread position: | 100-235 |
| Cow position: | chr6:17295860-17295996 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 107 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 108, 90 |
| Conread position: | 117-409 |
| Cow position: | chr6:19798991-19798714 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 120-291 |
| Cow position: | chr6:18788015-18788183 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 161, 72 |
| Conread position: | 153-517 |
| Cow position: | chr6:42931877-42932235 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 280, 62 |
| Conread position: | 251-516 |
| Cow position: | chr6:23898928-23899204 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 40 |
| Conread position: | 283-477 |
| Cow position: | chr6:11087317-11087132 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 283-477 |
| Cow position: | chr6:44820198-44820010 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 286-477 |
| Cow position: | chr6:14716547-14716730 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 129, 0 |
| Conread position: | 307-477 |
| Cow position: | chr6:18788767-18788932 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 47, 89 |
Show alignments to all cow chromosomes.