Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_004991.y1
        

               Conread position:
               144-417
               

               Cow position:
               chr1:72068908-72068622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               206
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               46, 26
               

               Conread position:
               146-436
               

               Cow position:
               chr1:43148622-43148306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               213
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               8, 281
               

               Conread position:
               147-343
               

               Cow position:
               chr1:71916191-71915991 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               36, 26
               

               Conread position:
               163-383
               

               Cow position:
               chr1:38278082-38277858 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               106, 152
               

               Conread position:
               163-383
               

               Cow position:
               chr1:49082685-49082914 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               164-332
               

               Cow position:
               chr1:16962063-16961892 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               105, 141
               

               Conread position:
               164-383
               

               Cow position:
               chr1:21093061-21093287 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 137
               

               Conread position:
               166-413
               

               Cow position:
               chr1:43352706-43352445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 17
               

               Conread position:
               166-419
               

               Cow position:
               chr1:22035561-22035810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               166-419
               

               Cow position:
               chr1:54478276-54478529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 15
               

               Conread position:
               168-340
               

               Cow position:
               chr1:59147393-59147219 (view UCSC Genome Browser custom track)
               

               Alignm length:
               176
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               37, 104
               

               Conread position:
               168-356
               

               Cow position:
               chr1:48730878-48730688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               31, 23
               

               Conread position:
               168-383
               

               Cow position:
               chr1:30983540-30983324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               141, 31
               

               Conread position:
               168-408
               

               Cow position:
               chr1:41027027-41027274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 31
               

               Conread position:
               169-399
               

               Cow position:
               chr1:72813569-72813810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               170-423
               

               Cow position:
               chr1:94226599-94226338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               190
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               98, 13
               

               Conread position:
               172-417
               

               Cow position:
               chr1:63530514-63530771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               99, 27
               

               Conread position:
               172-421
               

               Cow position:
               chr1:10778517-10778768 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               189
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               173-336
               

               Cow position:
               chr1:8349364-8349202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               7, 29
               

               Conread position:
               173-412
               

               Cow position:
               chr1:30189105-30189363 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               177-421
               

               Cow position:
               chr1:102468656-102468408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               178-423
               

               Cow position:
               chr1:80584391-80584644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               24, 14
               

               Conread position:
               179-289
               

               Cow position:
               chr1:102647311-102647198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               93
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               90, 0
               

               Conread position:
               179-332
               

               Cow position:
               chr1:76470616-76470761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 62
               

               Conread position:
               179-382
               

               Cow position:
               chr1:6941424-6941633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               64, 18
               

               Conread position:
               179-383
               

               Cow position:
               chr1:49433300-49433093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               162
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               90, 19
               

               Conread position:
               179-383
               

               Cow position:
               chr1:53622920-53623122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               162
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               5, 19
               

               Conread position:
               179-409
               

               Cow position:
               chr1:6958837-6959071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               59, 18
               

               Conread position:
               179-416
               

               Cow position:
               chr1:3605920-3605679 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               90, 12
               

               Conread position:
               179-417
               

               Cow position:
               chr1:29474387-29474141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               12, 124
               

               Conread position:
               179-421
               

               Cow position:
               chr1:92684731-92684466 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               194
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               55, 11
               

               Conread position:
               179-422
               

               Cow position:
               chr1:6394519-6394772 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               176
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               10, 20
               

               Conread position:
               179-422
               

               Cow position:
               chr1:21955411-21955156 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               180
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               179-423
               

               Cow position:
               chr1:48581092-48581335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               7, 14
               

               Conread position:
               179-424
               

               Cow position:
               chr1:8577-8836 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               179-424
               

               Cow position:
               chr1:64572474-64572732 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               17, 160
               

               Conread position:
               179-426
               

               Cow position:
               chr1:6854344-6854099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               13, 91
               

               Conread position:
               179-433
               

               Cow position:
               chr1:95829158-95828908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               184
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               15, 33
               

               Conread position:
               180-336
               

               Cow position:
               chr1:4581370-4581208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               180-381
               

               Cow position:
               chr1:71078996-71078796 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 10
               

               Conread position:
               180-382
               

               Cow position:
               chr1:50964167-50963960 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 122
               

               Conread position:
               180-416
               

               Cow position:
               chr1:88913280-88913529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               22, 169
               

               Conread position:
               180-417
               

               Cow position:
               chr1:75744822-75745071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               7, 176
               

               Conread position:
               181-342
               

               Cow position:
               chr1:73936177-73936016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               88, 9
               

               Conread position:
               181-407
               

               Cow position:
               chr1:75382946-75383164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               192, 18
               

               Conread position:
               181-420
               

               Cow position:
               chr1:39418146-39417917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               88, 21
               

               Conread position:
               181-421
               

               Cow position:
               chr1:37726457-37726199 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               181-422
               

               Cow position:
               chr1:500137-500392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 119
               

               Conread position:
               181-431
               

               Cow position:
               chr1:48444228-48443969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               88, 18
               

               Conread position:
               182-314
               

               Cow position:
               chr1:26729682-26729814 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 89
               

               Conread position:
               182-319
               

               Cow position:
               chr1:45288906-45288766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               182-321
               

               Cow position:
               chr1:75141963-75142104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               182-326
               

               Cow position:
               chr1:53425142-53425289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               182-327
               

               Cow position:
               chr1:37309552-37309406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               123
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               182-330
               

               Cow position:
               chr1:30504467-30504617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               86, 17
               

               Conread position:
               182-330
               

               Cow position:
               chr1:43822366-43822515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               13, 79
               

               Conread position:
               182-332
               

               Cow position:
               chr1:3352732-3352582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               182-332
               

               Cow position:
               chr1:81582080-81582232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               67, 10
               

               Conread position:
               182-335
               

               Cow position:
               chr1:8624484-8624328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               116
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               91, 130
               

               Conread position:
               182-337
               

               Cow position:
               chr1:60281335-60281496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               7, 0
               

               Conread position:
               182-339
               

               Cow position:
               chr1:98576011-98576172 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 27
               

               Conread position:
               182-340
               

               Cow position:
               chr1:30418074-30417922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               90, 15
               

               Conread position:
               182-340
               

               Cow position:
               chr1:46764839-46765002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               10, 129
               

               Conread position:
               182-341
               

               Cow position:
               chr1:19885347-19885508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               7, 32
               

               Conread position:
               182-341
               

               Cow position:
               chr1:95176901-95177064 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               14, 132
               

               Conread position:
               182-342
               

               Cow position:
               chr1:6972495-6972654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               182-342
               

               Cow position:
               chr1:58036984-58037146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               87, 116
               

               Conread position:
               182-342
               

               Cow position:
               chr1:68676327-68676490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               182-342
               

               Cow position:
               chr1:69264776-69264936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               182-342
               

               Cow position:
               chr1:78697804-78697644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               55, 17
               

               Conread position:
               182-342
               

               Cow position:
               chr1:84203478-84203639 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               23, 120
               

               Conread position:
               182-342
               

               Cow position:
               chr1:94261504-94261663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 14
               

               Conread position:
               182-342
               

               Cow position:
               chr1:97696708-97696872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               182-346
               

               Cow position:
               chr1:98594538-98594697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               86, 50
               

               Conread position:
               182-347
               

               Cow position:
               chr1:98511894-98512059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               131
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               87, 16
               

               Conread position:
               182-355
               

               Cow position:
               chr1:4032594-4032774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               136
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               182-360
               

               Cow position:
               chr1:43312067-43311885 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               182-363
               

               Cow position:
               chr1:90868475-90868296 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               87, 9
               

               Conread position:
               182-366
               

               Cow position:
               chr1:8347089-8347275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               182-368
               

               Cow position:
               chr1:39068990-39068801 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               86, 10
               

               Conread position:
               182-382
               

               Cow position:
               chr1:76019730-76019530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               9, 103
               

               Conread position:
               182-382
               

               Cow position:
               chr1:91811747-91811949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               182-383
               

               Cow position:
               chr1:635720-635516 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               90, 123
               

               Conread position:
               182-383
               

               Cow position:
               chr1:47886520-47886312 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               11, 66
               

               Conread position:
               182-383
               

               Cow position:
               chr1:60044951-60045155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               182-383
               

               Cow position:
               chr1:93528665-93528862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               90, 17
               

               Conread position:
               182-383
               

               Cow position:
               chr1:95558002-95558208 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               88, 113
               

               Conread position:
               182-386
               

               Cow position:
               chr1:95153186-95153395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               152
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               7, 53
               

               Conread position:
               182-408
               

               Cow position:
               chr1:45670601-45670844 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               145, 17
               

               Conread position:
               182-409
               

               Cow position:
               chr1:34856665-34856433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               11, 210
               

               Conread position:
               182-412
               

               Cow position:
               chr1:6826329-6826086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               147, 15
               

               Conread position:
               182-412
               

               Cow position:
               chr1:7908001-7908231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               15, 170
               

               Conread position:
               182-412
               

               Cow position:
               chr1:20000786-20000550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               10, 131
               

               Conread position:
               182-412
               

               Cow position:
               chr1:68826939-68826718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               200, 82
               

               Conread position:
               182-413
               

               Cow position:
               chr1:52912934-52912685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               10, 31
               

               Conread position:
               182-414
               

               Cow position:
               chr1:56225431-56225673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               14, 158
               

               Conread position:
               182-416
               

               Cow position:
               chr1:10942132-10941887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               180
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               182-416
               

               Cow position:
               chr1:10964254-10964499 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               18, 114
               

               Conread position:
               182-416
               

               Cow position:
               chr1:34771539-34771289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               191
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               182-417
               

               Cow position:
               chr1:18936869-18936625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               173
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               11, 40
               

               Conread position:
               182-417
               

               Cow position:
               chr1:35162375-35162616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               85, 204
               

               Conread position:
               182-417
               

               Cow position:
               chr1:71045720-71045946 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               193, 86
               

               Conread position:
               182-417
               

               Cow position:
               chr1:87072661-87072906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               179
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               11, 59
               

               Conread position:
               182-418
               

               Cow position:
               chr1:3923831-3923592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               87, 10
               

               Conread position:
               182-418
               

               Cow position:
               chr1:91023503-91023257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               13, 60
               

               Conread position:
               182-419
               

               Cow position:
               chr1:99609336-99609579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               87, 45
               

               Conread position:
               182-420
               

               Cow position:
               chr1:45555329-45555580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               10, 135
               

               Conread position:
               182-420
               

               Cow position:
               chr1:50931010-50930766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               194, 54
               

               Conread position:
               182-420
               

               Cow position:
               chr1:51445854-51446096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               176
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               182-420
               

               Cow position:
               chr1:91066187-91065943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               17, 165
               

               Conread position:
               182-421
               

               Cow position:
               chr1:62235482-62235242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 180
               

               Conread position:
               182-421
               

               Cow position:
               chr1:71119482-71119736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               183
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               20, 126
               

               Conread position:
               182-422
               

               Cow position:
               chr1:6304897-6304662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               89, 15
               

               Conread position:
               182-422
               

               Cow position:
               chr1:25734832-25735083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               14, 231
               

               Conread position:
               182-422
               

               Cow position:
               chr1:43505492-43505742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 9
               

               Conread position:
               182-422
               

               Cow position:
               chr1:95057019-95057245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               182-422
               

               Cow position:
               chr1:101507324-101507564 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               17, 133
               

               Conread position:
               182-423
               

               Cow position:
               chr1:25281695-25281460 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               14, 149
               

               Conread position:
               182-423
               

               Cow position:
               chr1:54156768-54156518 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               195
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               87, 15
               

               Conread position:
               182-423
               

               Cow position:
               chr1:72105377-72105619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               86, 51
               

               Conread position:
               182-423
               

               Cow position:
               chr1:76613171-76612926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               17, 209
               

               Conread position:
               182-423
               

               Cow position:
               chr1:101632373-101632136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               15, 169
               

               Conread position:
               182-424
               

               Cow position:
               chr1:15547437-15547682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 27
               

               Conread position:
               182-424
               

               Cow position:
               chr1:22525841-22526091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               14, 157
               

               Conread position:
               182-430
               

               Cow position:
               chr1:44506934-44507192 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               10, 189
               

               Conread position:
               182-433
               

               Cow position:
               chr1:47790700-47790439 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 107
               

               Conread position:
               182-433
               

               Cow position:
               chr1:79003938-79004203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               14, 92
               

               Conread position:
               182-433
               

               Cow position:
               chr1:82880610-82880861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               187
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               15, 74
               

               Conread position:
               182-434
               

               Cow position:
               chr1:34159801-34160045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               182-435
               

               Cow position:
               chr1:59020624-59020900 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               14, 93
               

               Conread position:
               182-437
               

               Cow position:
               chr1:95835832-95835563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               89, 17
               

               Conread position:
               182-442
               

               Cow position:
               chr1:55428993-55428715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               201
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               182-448
               

               Cow position:
               chr1:31357546-31357273 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               14, 124
               

               Conread position:
               183-332
               

               Cow position:
               chr1:98360433-98360286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               13, 82
               

               Conread position:
               183-342
               

               Cow position:
               chr1:95974362-95974527 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               17, 158
               

               Conread position:
               183-382
               

               Cow position:
               chr1:96081447-96081648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-37
               

               Alignm gaps (pig, cow):
               85, 16
               

               Conread position:
               183-383
               

               Cow position:
               chr1:33409661-33409455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               6, 27
               

               Conread position:
               183-383
               

               Cow position:
               chr1:45223546-45223744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               9, 167
               

               Conread position:
               183-383
               

               Cow position:
               chr1:60986953-60987160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               143
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               183-396
               

               Cow position:
               chr1:33996956-33996742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               155
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               86, 16
               

               Conread position:
               183-416
               

               Cow position:
               chr1:90621543-90621297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               13, 177
               

               Conread position:
               183-417
               

               Cow position:
               chr1:42868970-42868739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               200, 70
               

               Conread position:
               183-417
               

               Cow position:
               chr1:52496738-52496980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               90, 42
               

               Conread position:
               183-417
               

               Cow position:
               chr1:79165117-79164871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               14, 148
               

               Conread position:
               183-418
               

               Cow position:
               chr1:64302279-64302038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               16, 149
               

               Conread position:
               183-419
               

               Cow position:
               chr1:8670739-8670980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               86, 224
               

               Conread position:
               183-421
               

               Cow position:
               chr1:68863000-68863235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 89
               

               Conread position:
               183-422
               

               Cow position:
               chr1:724705-724954 (view UCSC Genome Browser custom track)
               

               Alignm length:
               252
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               21, 165
               

               Conread position:
               183-422
               

               Cow position:
               chr1:25383633-25383874 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 45
               

               Conread position:
               183-422
               

               Cow position:
               chr1:52435237-52435493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               8, 109
               

               Conread position:
               183-423
               

               Cow position:
               chr1:186309-186062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               198
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               16, 86
               

               Conread position:
               183-423
               

               Cow position:
               chr1:102529890-102529647 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               88, 16
               

               Conread position:
               183-429
               

               Cow position:
               chr1:71790183-71789925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               19, 112
               

               Conread position:
               183-440
               

               Cow position:
               chr1:53374399-53374661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               192
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               10, 39
               

               Conread position:
               183-444
               

               Cow position:
               chr1:46030924-46031201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               192
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               18, 125
               

               Conread position:
               184-331
               

               Cow position:
               chr1:48769771-48769919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               87, 13
               

               Conread position:
               184-342
               

               Cow position:
               chr1:31272475-31272315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               125
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               87, 146
               

               Conread position:
               184-342
               

               Cow position:
               chr1:85550110-85549951 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               132
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               84, 15
               

               Conread position:
               184-343
               

               Cow position:
               chr1:98708602-98708754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               184-377
               

               Cow position:
               chr1:31256253-31256069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               88, 15
               

               Conread position:
               184-380
               

               Cow position:
               chr1:66898532-66898329 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               184-383
               

               Cow position:
               chr1:67529022-67529224 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 163
               

               Conread position:
               184-383
               

               Cow position:
               chr1:88359847-88360053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               87, 17
               

               Conread position:
               184-408
               

               Cow position:
               chr1:53520880-53521107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 13
               

               Conread position:
               184-415
               

               Cow position:
               chr1:65318542-65318787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 121
               

               Conread position:
               184-417
               

               Cow position:
               chr1:100551937-100552177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 120
               

               Conread position:
               184-420
               

               Cow position:
               chr1:81481416-81481173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               15, 164
               

               Conread position:
               184-421
               

               Cow position:
               chr1:23512692-23512457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               84, 110
               

               Conread position:
               184-422
               

               Cow position:
               chr1:20667775-20667534 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               192
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               85, 115
               

               Conread position:
               184-422
               

               Cow position:
               chr1:33206909-33206658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               81, 28
               

               Conread position:
               184-422
               

               Cow position:
               chr1:78079687-78079940 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               85, 18
               

               Conread position:
               184-423
               

               Cow position:
               chr1:42541564-42541811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               13, 153
               

               Conread position:
               184-423
               

               Cow position:
               chr1:59518886-59519129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               184-431
               

               Cow position:
               chr1:51394384-51394643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               15, 143
               

               Conread position:
               185-336
               

               Cow position:
               chr1:77892108-77892257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               185-342
               

               Cow position:
               chr1:68672631-68672474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               125
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 58
               

               Conread position:
               185-383
               

               Cow position:
               chr1:82337807-82337613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               185-383
               

               Cow position:
               chr1:101177484-101177690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               84, 14
               

               Conread position:
               185-418
               

               Cow position:
               chr1:69695023-69694795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 7
               

               Conread position:
               185-433
               

               Cow position:
               chr1:38418994-38419250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               185
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 36
               

               Conread position:
               185-435
               

               Cow position:
               chr1:242524-242783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               185-436
               

               Cow position:
               chr1:72034955-72034697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               185-441
               

               Cow position:
               chr1:74832391-74832652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               265
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               73, 17
               

               Conread position:
               186-336
               

               Cow position:
               chr1:80336281-80336126 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               186-421
               

               Cow position:
               chr1:2462349-2462585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 82
               

               Conread position:
               186-433
               

               Cow position:
               chr1:97611691-97611445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               85, 165
               

               Conread position:
               186-448
               

               Cow position:
               chr1:72422440-72422163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               207
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               9, 96
               

               Conread position:
               187-330
               

               Cow position:
               chr1:66430262-66430407 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               16, 54
               

               Conread position:
               187-336
               

               Cow position:
               chr1:84768908-84768757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               78, 12
               

               Conread position:
               187-342
               

               Cow position:
               chr1:45478887-45478735 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               187-383
               

               Cow position:
               chr1:11729145-11729339 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               84, 160
               

               Conread position:
               187-383
               

               Cow position:
               chr1:100421796-100421989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               84, 12
               

               Conread position:
               187-403
               

               Cow position:
               chr1:78809845-78810078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               187-417
               

               Cow position:
               chr1:96365634-96365860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               187-420
               

               Cow position:
               chr1:100474204-100474442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               82, 205
               

               Conread position:
               187-421
               

               Cow position:
               chr1:43855273-43855505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               187-421
               

               Cow position:
               chr1:74082010-74081786 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               82, 5
               

               Conread position:
               187-422
               

               Cow position:
               chr1:7739917-7740148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               12, 73
               

               Conread position:
               187-422
               

               Cow position:
               chr1:102266298-102266065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 112
               

               Conread position:
               188-341
               

               Cow position:
               chr1:97938934-97939084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               83, 26
               

               Conread position:
               188-342
               

               Cow position:
               chr1:65881778-65881933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               119
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               83, 110
               

               Conread position:
               188-383
               

               Cow position:
               chr1:56477564-56477753 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 11
               

               Conread position:
               188-383
               

               Cow position:
               chr1:99642395-99642201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               81, 9
               

               Conread position:
               188-393
               

               Cow position:
               chr1:24534284-24534083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               11, 150
               

               Conread position:
               188-415
               

               Cow position:
               chr1:22730704-22730942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               8, 164
               

               Conread position:
               188-422
               

               Cow position:
               chr1:86110767-86110530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 79
               

               Conread position:
               189-422
               

               Cow position:
               chr1:84104088-84103853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 10
               

               Conread position:
               189-435
               

               Cow position:
               chr1:101834790-101835047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               194
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               6, 65
               

               Conread position:
               189-436
               

               Cow position:
               chr1:63434835-63434572 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               14, 106
               

               Conread position:
               190-342
               

               Cow position:
               chr1:81580151-81580305 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               190-382
               

               Cow position:
               chr1:57089706-57089511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               79, 104
               

               Conread position:
               190-383
               

               Cow position:
               chr1:45019829-45019638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               9, 23
               

               Conread position:
               190-412
               

               Cow position:
               chr1:19515647-19515411 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               190-416
               

               Cow position:
               chr1:71665959-71665724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               79, 109
               

               Conread position:
               190-417
               

               Cow position:
               chr1:96019203-96019440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               79, 61
               

               Conread position:
               190-418
               

               Cow position:
               chr1:3815712-3815470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               176
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               34, 9
               

               Conread position:
               190-418
               

               Cow position:
               chr1:39427032-39426803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               168
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               79, 177
               

               Conread position:
               190-420
               

               Cow position:
               chr1:54258541-54258774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               190-421
               

               Cow position:
               chr1:6731154-6731394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               78, 27
               

               Conread position:
               190-421
               

               Cow position:
               chr1:81515205-81515453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               9, 230
               

               Conread position:
               190-424
               

               Cow position:
               chr1:67654352-67654108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 152
               

               Conread position:
               190-433
               

               Cow position:
               chr1:78794261-78794007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               183
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               11, 112
               

               Conread position:
               190-437
               

               Cow position:
               chr1:53370059-53370316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               190-440
               

               Cow position:
               chr1:24778016-24777747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               139, 63
               

               Conread position:
               191-332
               

               Cow position:
               chr1:42545806-42545661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               191-332
               

               Cow position:
               chr1:85712416-85712557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               78, 11
               

               Conread position:
               191-335
               

               Cow position:
               chr1:80422252-80422394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               138, 13
               

               Conread position:
               191-346
               

               Cow position:
               chr1:77683323-77683479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               13, 141
               

               Conread position:
               191-351
               

               Cow position:
               chr1:21835909-21836071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               149, 62
               

               Conread position:
               191-367
               

               Cow position:
               chr1:93554810-93554989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               78, 155
               

               Conread position:
               191-380
               

               Cow position:
               chr1:52488006-52487813 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               78, 100
               

               Conread position:
               191-397
               

               Cow position:
               chr1:98413746-98413967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               191-412
               

               Cow position:
               chr1:38205448-38205657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 146
               

               Conread position:
               191-412
               

               Cow position:
               chr1:102768155-102768381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               24, 18
               

               Conread position:
               191-421
               

               Cow position:
               chr1:77739695-77739939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               191-422
               

               Cow position:
               chr1:8287656-8287414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               80, 103
               

               Conread position:
               191-422
               

               Cow position:
               chr1:20104240-20104471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               78, 116
               

               Conread position:
               191-422
               

               Cow position:
               chr1:22823879-22824114 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               78, 200
               

               Conread position:
               191-436
               

               Cow position:
               chr1:96599315-96599078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 49
               

               Conread position:
               192-325
               

               Cow position:
               chr1:81868754-81868619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               75, 128
               

               Conread position:
               192-332
               

               Cow position:
               chr1:50991908-50992051 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               192-332
               

               Cow position:
               chr1:53308415-53308276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               122
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               7, 93
               

               Conread position:
               192-341
               

               Cow position:
               chr1:52995000-52995153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               192-347
               

               Cow position:
               chr1:71796334-71796178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               112, 10
               

               Conread position:
               192-348
               

               Cow position:
               chr1:36875005-36875160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               192-363
               

               Cow position:
               chr1:77880755-77880588 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               192-370
               

               Cow position:
               chr1:32001338-32001167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               192-383
               

               Cow position:
               chr1:2971891-2972088 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               60, 0
               

               Conread position:
               192-409
               

               Cow position:
               chr1:39224951-39224736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               76, 145
               

               Conread position:
               192-412
               

               Cow position:
               chr1:22192744-22192976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               192-414
               

               Cow position:
               chr1:3965812-3966037 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               157, 10
               

               Conread position:
               192-415
               

               Cow position:
               chr1:84811964-84811733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               77, 160
               

               Conread position:
               192-416
               

               Cow position:
               chr1:99322587-99322360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               77, 102
               

               Conread position:
               192-421
               

               Cow position:
               chr1:1956357-1956123 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               172
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               192-422
               

               Cow position:
               chr1:1496558-1496311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               19, 114
               

               Conread position:
               192-422
               

               Cow position:
               chr1:90267694-90267929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               10, 43
               

               Conread position:
               192-423
               

               Cow position:
               chr1:30862434-30862205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               134, 73
               

               Conread position:
               192-423
               

               Cow position:
               chr1:67919110-67919343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 156
               

               Conread position:
               192-436
               

               Cow position:
               chr1:73960678-73960913 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               175
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               77, 94
               

               Conread position:
               192-437
               

               Cow position:
               chr1:73721336-73721592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               77, 10
               

               Conread position:
               192-441
               

               Cow position:
               chr1:74084213-74083964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               178
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               68, 61
               

               Conread position:
               193-311
               

               Cow position:
               chr1:43703385-43703506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               193-325
               

               Cow position:
               chr1:5006138-5006272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               193-327
               

               Cow position:
               chr1:95215214-95215077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               193-336
               

               Cow position:
               chr1:81809161-81809016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 9
               

               Conread position:
               193-337
               

               Cow position:
               chr1:89349941-89350085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               78, 136
               

               Conread position:
               193-366
               

               Cow position:
               chr1:89381253-89381425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               128
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               79, 9
               

               Conread position:
               193-376
               

               Cow position:
               chr1:52039614-52039794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               130
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               76, 152
               

               Conread position:
               193-391
               

               Cow position:
               chr1:102349770-102349582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               98, 62
               

               Conread position:
               193-397
               

               Cow position:
               chr1:3762479-3762283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               143
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               193-408
               

               Cow position:
               chr1:43872342-43872107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               79, 14
               

               Conread position:
               193-412
               

               Cow position:
               chr1:81290483-81290710 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               193-416
               

               Cow position:
               chr1:37322022-37321800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               158, 76
               

               Conread position:
               193-416
               

               Cow position:
               chr1:102648254-102648490 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               193-417
               

               Cow position:
               chr1:15333869-15334100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               12, 78
               

               Conread position:
               193-417
               

               Cow position:
               chr1:26895835-26895600 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 100
               

               Conread position:
               193-422
               

               Cow position:
               chr1:7748190-7748432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               170
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               193-422
               

               Cow position:
               chr1:7752356-7752596 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 9
               

               Conread position:
               193-422
               

               Cow position:
               chr1:36688402-36688164 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               75, 101
               

               Conread position:
               193-422
               

               Cow position:
               chr1:61884889-61885127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 135
               

               Conread position:
               193-433
               

               Cow position:
               chr1:5637083-5636846 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               171
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               77, 107
               

               Conread position:
               193-443
               

               Cow position:
               chr1:87095238-87094985 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               75, 197
               

               Conread position:
               194-330
               

               Cow position:
               chr1:72286091-72285952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               194-333
               

               Cow position:
               chr1:69481970-69481830 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 8
               

               Conread position:
               194-333
               

               Cow position:
               chr1:72141554-72141691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 39
               

               Conread position:
               194-336
               

               Cow position:
               chr1:47402505-47402650 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               47, 104
               

               Conread position:
               194-336
               

               Cow position:
               chr1:81913174-81913033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               194-381
               

               Cow position:
               chr1:23186821-23186636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               76, 111
               

               Conread position:
               194-382
               

               Cow position:
               chr1:89448877-89449065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               77, 147
               

               Conread position:
               194-383
               

               Cow position:
               chr1:86578942-86579140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               144
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               135, 0
               

               Conread position:
               194-383
               

               Cow position:
               chr1:92996914-92996718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               194-412
               

               Cow position:
               chr1:72011836-72011616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               159
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               75, 169
               

               Conread position:
               194-412
               

               Cow position:
               chr1:97144489-97144265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               8, 105
               

               Conread position:
               194-416
               

               Cow position:
               chr1:49825089-49824856 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               47, 155
               

               Conread position:
               194-417
               

               Cow position:
               chr1:81228357-81228124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               75, 122
               

               Conread position:
               194-419
               

               Cow position:
               chr1:100823014-100823253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               16, 48
               

               Conread position:
               194-422
               

               Cow position:
               chr1:12222630-12222388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               75, 121
               

               Conread position:
               194-422
               

               Cow position:
               chr1:14106641-14106392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               174
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               77, 59
               

               Conread position:
               194-424
               

               Cow position:
               chr1:21787313-21787543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 138
               

               Conread position:
               194-432
               

               Cow position:
               chr1:75250092-75250327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               73, 33
               

               Conread position:
               194-433
               

               Cow position:
               chr1:38706877-38706637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               75, 105
               

               Conread position:
               194-436
               

               Cow position:
               chr1:55229953-55230203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               195-303
               

               Cow position:
               chr1:101946736-101946625 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               195-335
               

               Cow position:
               chr1:4291144-4291285 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               195-340
               

               Cow position:
               chr1:54157272-54157422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               195-342
               

               Cow position:
               chr1:90976110-90975959 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               74, 120
               

               Conread position:
               195-383
               

               Cow position:
               chr1:95618620-95618809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               145
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               73, 156
               

               Conread position:
               195-422
               

               Cow position:
               chr1:28563588-28563345 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               134, 0
               

               Conread position:
               195-422
               

               Cow position:
               chr1:98897716-98897474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               195-433
               

               Cow position:
               chr1:97231939-97232197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               70, 7
               

               Conread position:
               196-334
               

               Cow position:
               chr1:235778-235641 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               76, 35
               

               Conread position:
               196-383
               

               Cow position:
               chr1:81858923-81858733 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               33, 143
               

               Conread position:
               196-412
               

               Cow position:
               chr1:88111854-88112052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               75, 54
               

               Conread position:
               197-417
               

               Cow position:
               chr1:49334412-49334180 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               74, 48
               

               Conread position:
               198-327
               

               Cow position:
               chr1:61542937-61542806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               133
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               71, 57
               

               Conread position:
               198-361
               

               Cow position:
               chr1:3914937-3914773 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               74, 55
               

               Conread position:
               198-383
               

               Cow position:
               chr1:49980691-49980876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               147
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               72, 152
               

               Conread position:
               198-383
               

               Cow position:
               chr1:101268020-101267833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               73, 35
               

               Conread position:
               198-408
               

               Cow position:
               chr1:63078991-63079203 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               71, 86
               

               Conread position:
               198-413
               

               Cow position:
               chr1:99570506-99570291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               39, 62
               

               Conread position:
               198-414
               

               Cow position:
               chr1:68127209-68126982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               198-419
               

               Cow position:
               chr1:87197801-87198020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               73, 149
               

               Conread position:
               198-422
               

               Cow position:
               chr1:16061023-16060792 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               72, 146
               

               Conread position:
               198-449
               

               Cow position:
               chr1:76739928-76739668 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               79, 23
               

               Conread position:
               199-342
               

               Cow position:
               chr1:78068087-78067942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               70, 123
               

               Conread position:
               199-410
               

               Cow position:
               chr1:51860579-51860360 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               72, 148
               

               Conread position:
               199-413
               

               Cow position:
               chr1:42887295-42887073 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               72, 141
               

               Conread position:
               199-418
               

               Cow position:
               chr1:66752647-66752420 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               70, 149
               

               Conread position:
               199-420
               

               Cow position:
               chr1:56225767-56225996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               72, 148
               

               Conread position:
               199-422
               

               Cow position:
               chr1:73020680-73020444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               173
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               70, 100
               

               Conread position:
               199-423
               

               Cow position:
               chr1:852152-852392 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               72, 106
               

               Conread position:
               199-423
               

               Cow position:
               chr1:69539673-69539902 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               199-424
               

               Cow position:
               chr1:40192713-40192482 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               141, 52
               

               Conread position:
               200-383
               

               Cow position:
               chr1:69940840-69940656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               69, 99
               

               Conread position:
               200-412
               

               Cow position:
               chr1:14206166-14205958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               184, 53
               

               Conread position:
               200-415
               

               Cow position:
               chr1:46030378-46030155 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               68, 95
               

               Conread position:
               200-423
               

               Cow position:
               chr1:73719444-73719688 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               200-424
               

               Cow position:
               chr1:76735495-76735260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               96, 91
               

               Conread position:
               200-451
               

               Cow position:
               chr1:15102872-15103127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               182, 34
               

               Conread position:
               201-329
               

               Cow position:
               chr1:54732501-54732372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               71, 114
               

               Conread position:
               201-342
               

               Cow position:
               chr1:56711615-56711475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               69, 49
               

               Conread position:
               201-386
               

               Cow position:
               chr1:3417332-3417528 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               38, 168
               

               Conread position:
               201-407
               

               Cow position:
               chr1:6381756-6381977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               68, 93
               

               Conread position:
               201-423
               

               Cow position:
               chr1:45315652-45315425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               70, 190
               

               Conread position:
               202-327
               

               Cow position:
               chr1:24570962-24570834 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               102
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               202-336
               

               Cow position:
               chr1:19304556-19304692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               5, 91
               

               Conread position:
               202-337
               

               Cow position:
               chr1:95516024-95516163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               202-351
               

               Cow position:
               chr1:45874093-45873934 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               54, 153
               

               Conread position:
               202-366
               

               Cow position:
               chr1:24561524-24561355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               66, 97
               

               Conread position:
               202-383
               

               Cow position:
               chr1:61011166-61011343 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               69, 138
               

               Conread position:
               202-421
               

               Cow position:
               chr1:43311787-43311557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               168
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               203-383
               

               Cow position:
               chr1:6031610-6031795 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               66, 102
               

               Conread position:
               204-388
               

               Cow position:
               chr1:98683861-98684048 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               204-417
               

               Cow position:
               chr1:96184002-96183776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               42, 105
               

               Conread position:
               204-440
               

               Cow position:
               chr1:6790762-6790997 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               68, 24
               

               Conread position:
               206-342
               

               Cow position:
               chr1:64019532-64019393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               206-418
               

               Cow position:
               chr1:759429-759211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               65, 196
               

               Conread position:
               206-421
               

               Cow position:
               chr1:24133071-24132849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               175, 138
               

               Conread position:
               207-383
               

               Cow position:
               chr1:22461248-22461071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               64, 144
               

               Conread position:
               207-408
               

               Cow position:
               chr1:21954232-21954036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               5, 107
               

               Conread position:
               207-436
               

               Cow position:
               chr1:95152861-95153105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               209-376
               

               Cow position:
               chr1:101280742-101280576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               213-421
               

               Cow position:
               chr1:95156968-95156748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               58, 177
               

               Conread position:
               214-410
               

               Cow position:
               chr1:100852706-100852906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 171
               

               Conread position:
               216-416
               

               Cow position:
               chr1:73551511-73551294 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 211
               

               Conread position:
               217-415
               

               Cow position:
               chr1:87220460-87220651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               154
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               218-419
               

               Cow position:
               chr1:32014199-32014404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               214
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               54, 13
               

               Conread position:
               219-383
               

               Cow position:
               chr1:31630285-31630115 (view UCSC Genome Browser custom track)
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               221-342
               

               Cow position:
               chr1:53640719-53640840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               221-421
               

               Cow position:
               chr1:93590582-93590372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               222-342
               

               Cow position:
               chr1:65909516-65909638 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               49, 100
               

               Conread position:
               223-331
               

               Cow position:
               chr1:55194240-55194129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               223-341
               

               Cow position:
               chr1:45283200-45283321 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               48, 0
               

               Conread position:
               223-373
               

               Cow position:
               chr1:67539564-67539720 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               18, 41
               

               Conread position:
               223-419
               

               Cow position:
               chr1:84594894-84595104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               224-330
               

               Cow position:
               chr1:22153701-22153809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               47, 34
               

               Conread position:
               224-343
               

               Cow position:
               chr1:19855164-19855281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               94
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               224-408
               

               Cow position:
               chr1:83606443-83606254 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               224-411
               

               Cow position:
               chr1:731965-731764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               47, 9
               

               Conread position:
               224-416
               

               Cow position:
               chr1:23055054-23055245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               43, 140
               

               Conread position:
               224-437
               

               Cow position:
               chr1:34001054-34001268 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               48, 71
               

               Conread position:
               225-422
               

               Cow position:
               chr1:13828578-13828372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               46, 34
               

               Conread position:
               225-433
               

               Cow position:
               chr1:55685970-55685761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               44, 130
               

               Conread position:
               225-433
               

               Cow position:
               chr1:70483326-70483108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               47, 126
               

               Conread position:
               226-384
               

               Cow position:
               chr1:42822280-42822442 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               228-399
               

               Cow position:
               chr1:81179337-81179161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               181
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               41, 121
               

               Conread position:
               228-412
               

               Cow position:
               chr1:46172616-46172811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               228-414
               

               Cow position:
               chr1:81638559-81638747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               40, 112
               

               Conread position:
               228-438
               

               Cow position:
               chr1:98557108-98556888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               44, 66
               

               Conread position:
               229-417
               

               Cow position:
               chr1:12090362-12090553 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               73, 39
               

               Conread position:
               229-422
               

               Cow position:
               chr1:15875672-15875876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               151
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               39, 76
               

               Conread position:
               232-423
               

               Cow position:
               chr1:11873293-11873105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               143
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               59, 38
               

               Conread position:
               233-420
               

               Cow position:
               chr1:63460894-63461092 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               36, 119
               

               Conread position:
               234-342
               

               Cow position:
               chr1:99024214-99024103 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               234-383
               

               Cow position:
               chr1:70416743-70416592 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               37, 118
               

               Conread position:
               234-415
               

               Cow position:
               chr1:5872762-5872565 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               234-428
               

               Cow position:
               chr1:6836842-6836646 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               141
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               235-412
               

               Cow position:
               chr1:32035692-32035508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               137
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 111
               

               Conread position:
               236-388
               

               Cow position:
               chr1:92095391-92095538 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               239-414
               

               Cow position:
               chr1:101855997-101855824 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               124, 14
               

               Conread position:
               240-417
               

               Cow position:
               chr1:1606111-1605920 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               240-422
               

               Cow position:
               chr1:53402804-53402996 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               142
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               31, 61
               

               Conread position:
               242-414
               

               Cow position:
               chr1:62852696-62852526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               248-409
               

               Cow position:
               chr1:101151592-101151752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               248-434
               

               Cow position:
               chr1:91810781-91810964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               129
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               255-418
               

               Cow position:
               chr1:63212221-63212047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               16, 40
               

               Conread position:
               268-414
               

               Cow position:
               chr1:42291979-42292124 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               268-414
               

               Cow position:
               chr1:59675657-59675802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               268-414
               

               Cow position:
               chr1:97124983-97125129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               141, 88
               

               Conread position:
               268-416
               

               Cow position:
               chr1:54645481-54645634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               268-417
               

               Cow position:
               chr1:50843798-50843649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               121
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               61, 136
               

               Conread position:
               268-436
               

               Cow position:
               chr1:45449356-45449515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               268-448
               

               Cow position:
               chr1:82917421-82917243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               163, 140
               

               Conread position:
               303-418
               

               Cow position:
               chr1:53425416-53425529 (view UCSC Genome Browser custom track)
               

               Alignm length:
               116
               

               Alignm identity:
               92
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               46, 0
               
Show alignments to all cow chromosomes.
Conread position:	144-417
Cow position:	chr1:72068908-72068622 (view UCSC Genome Browser custom track)
Alignm length:	290
Alignm identity:	206
Alignm E-value:	6e-33
Alignm gaps (pig, cow):	46, 26
Conread position:	146-436
Cow position:	chr1:43148622-43148306 (view UCSC Genome Browser custom track)
Alignm length:	318
Alignm identity:	213
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	8, 281
Conread position:	147-343
Cow position:	chr1:71916191-71915991 (view UCSC Genome Browser custom track)
Alignm length:	203
Alignm identity:	156
Alignm E-value:	9e-37
Alignm gaps (pig, cow):	36, 26
Conread position:	163-383
Cow position:	chr1:38278082-38277858 (view UCSC Genome Browser custom track)
Alignm length:	226
Alignm identity:	159
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	106, 152
Conread position:	164-332
Cow position:	chr1:16962063-16961892 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	124
Alignm E-value:	2e-22
Alignm gaps (pig, cow):	105, 141
Conread position:	164-383
Cow position:	chr1:21093061-21093287 (view UCSC Genome Browser custom track)
Alignm length:	230
Alignm identity:	163
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	11, 137
Conread position:	166-413
Cow position:	chr1:43352706-43352445 (view UCSC Genome Browser custom track)
Alignm length:	265
Alignm identity:	188
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	26, 17
Conread position:	166-419
Cow position:	chr1:22035561-22035810 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	183
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	30, 16
Conread position:	168-340
Cow position:	chr1:59147393-59147219 (view UCSC Genome Browser custom track)
Alignm length:	176
Alignm identity:	128
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	37, 104
Conread position:	168-356
Cow position:	chr1:48730878-48730688 (view UCSC Genome Browser custom track)
Alignm length:	195
Alignm identity:	144
Alignm E-value:	3e-27
Alignm gaps (pig, cow):	31, 23
Conread position:	168-383
Cow position:	chr1:30983540-30983324 (view UCSC Genome Browser custom track)
Alignm length:	220
Alignm identity:	158
Alignm E-value:	1e-29
Alignm gaps (pig, cow):	141, 31
Conread position:	168-408
Cow position:	chr1:41027027-41027274 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	175
Alignm E-value:	3e-25
Alignm gaps (pig, cow):	103, 31
Conread position:	169-399
Cow position:	chr1:72813569-72813810 (view UCSC Genome Browser custom track)
Alignm length:	243
Alignm identity:	181
Alignm E-value:	3e-37
Alignm gaps (pig, cow):	99, 43
Conread position:	170-423
Cow position:	chr1:94226599-94226338 (view UCSC Genome Browser custom track)
Alignm length:	267
Alignm identity:	190
Alignm E-value:	2e-31
Alignm gaps (pig, cow):	98, 13
Conread position:	172-417
Cow position:	chr1:63530514-63530771 (view UCSC Genome Browser custom track)
Alignm length:	261
Alignm identity:	188
Alignm E-value:	2e-33
Alignm gaps (pig, cow):	99, 27
Conread position:	172-421
Cow position:	chr1:10778517-10778768 (view UCSC Genome Browser custom track)
Alignm length:	260
Alignm identity:	189
Alignm E-value:	8e-35
Alignm gaps (pig, cow):	8, 29
Conread position:	173-336
Cow position:	chr1:8349364-8349202 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	124
Alignm E-value:	6e-22
Alignm gaps (pig, cow):	7, 29
Conread position:	173-412
Cow position:	chr1:30189105-30189363 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	183
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	19, 0
Conread position:	177-421
Cow position:	chr1:102468656-102468408 (view UCSC Genome Browser custom track)
Alignm length:	253
Alignm identity:	189
Alignm E-value:	1e-39
Alignm gaps (pig, cow):	8, 23
Conread position:	178-423
Cow position:	chr1:80584391-80584644 (view UCSC Genome Browser custom track)
Alignm length:	259
Alignm identity:	175
Alignm E-value:	2e-21
Alignm gaps (pig, cow):	24, 14