Cow genome map
| Conread name: | rpigcf0_004991.y1 |
| Conread position: | 159-412 |
| Cow position: | chr24:29606121-29605857 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 37, 22 |
| Conread position: | 164-363 |
| Cow position: | chr24:18614918-18615122 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 17 |
| Conread position: | 166-389 |
| Cow position: | chr24:16895209-16895003 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 168-443 |
| Cow position: | chr24:38006787-38006502 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 205 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 9, 32 |
| Conread position: | 169-346 |
| Cow position: | chr24:16895514-16895335 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 169-383 |
| Cow position: | chr24:19637508-19637724 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 102, 8 |
| Conread position: | 170-383 |
| Cow position: | chr24:18741648-18741427 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 99, 9 |
| Conread position: | 174-394 |
| Cow position: | chr24:8676748-8676973 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 26, 217 |
| Conread position: | 175-340 |
| Cow position: | chr24:20969740-20969569 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 179-327 |
| Cow position: | chr24:34272740-34272893 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 48 |
| Conread position: | 179-342 |
| Cow position: | chr24:32204864-32204697 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 179-375 |
| Cow position: | chr24:18331652-18331851 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 90, 18 |
| Conread position: | 179-413 |
| Cow position: | chr24:13626215-13626463 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 126 |
| Conread position: | 179-420 |
| Cow position: | chr24:17955511-17955279 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 92, 20 |
| Conread position: | 179-421 |
| Cow position: | chr24:34390216-34390456 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 32, 18 |
| Conread position: | 179-422 |
| Cow position: | chr24:19623788-19624053 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 92, 62 |
| Conread position: | 179-425 |
| Cow position: | chr24:2992948-2992690 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 179-426 |
| Cow position: | chr24:20225674-20225933 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 123, 18 |
| Conread position: | 179-440 |
| Cow position: | chr24:21606741-21606468 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 170, 90 |
| Conread position: | 179-441 |
| Cow position: | chr24:39523517-39523256 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 195 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 92, 161 |
| Conread position: | 180-422 |
| Cow position: | chr24:5141875-5142123 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 15, 32 |
| Conread position: | 180-422 |
| Cow position: | chr24:18999980-19000218 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 88, 114 |
| Conread position: | 181-341 |
| Cow position: | chr24:814327-814173 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 181-342 |
| Cow position: | chr24:18314006-18313835 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 70, 40 |
| Conread position: | 181-422 |
| Cow position: | chr24:352672-352416 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 182-315 |
| Cow position: | chr24:21894985-21895120 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 87, 95 |
| Conread position: | 182-321 |
| Cow position: | chr24:19736400-19736257 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 107 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 182-325 |
| Cow position: | chr24:7046813-7046669 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 182-331 |
| Cow position: | chr24:44054227-44054081 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 110, 21 |
| Conread position: | 182-332 |
| Cow position: | chr24:27418166-27418016 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 10, 74 |
| Conread position: | 182-336 |
| Cow position: | chr24:34496053-34496216 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 182-341 |
| Cow position: | chr24:35150457-35150615 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 182-342 |
| Cow position: | chr24:11007393-11007555 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 13, 73 |
| Conread position: | 182-342 |
| Cow position: | chr24:19769423-19769593 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 182-342 |
| Cow position: | chr24:31159556-31159713 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 182-342 |
| Cow position: | chr24:34008640-34008475 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 182-342 |
| Cow position: | chr24:40850099-40850249 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 182-346 |
| Cow position: | chr24:24662195-24662029 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 182-358 |
| Cow position: | chr24:27290804-27290986 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 182-363 |
| Cow position: | chr24:43364294-43364475 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 17, 158 |
| Conread position: | 182-382 |
| Cow position: | chr24:19535319-19535116 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 85, 10 |
| Conread position: | 182-383 |
| Cow position: | chr24:17752178-17751970 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 21, 138 |
| Conread position: | 182-383 |
| Cow position: | chr24:31816510-31816715 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 14, 172 |
| Conread position: | 182-401 |
| Cow position: | chr24:40130062-40130301 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 14, 119 |
| Conread position: | 182-411 |
| Cow position: | chr24:16645388-16645154 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 166 |
| Conread position: | 182-412 |
| Cow position: | chr24:16509906-16510147 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 46, 17 |
| Conread position: | 182-412 |
| Cow position: | chr24:28600504-28600262 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 14, 162 |
| Conread position: | 182-412 |
| Cow position: | chr24:28690620-28690862 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 87, 81 |
| Conread position: | 182-412 |
| Cow position: | chr24:34742687-34742925 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 182-417 |
| Cow position: | chr24:28553617-28553391 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 201, 16 |
| Conread position: | 182-417 |
| Cow position: | chr24:37395274-37395025 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 15 |
| Conread position: | 182-417 |
| Cow position: | chr24:42103309-42103542 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 109, 68 |
| Conread position: | 182-420 |
| Cow position: | chr24:27284754-27285008 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 60 |
| Conread position: | 182-420 |
| Cow position: | chr24:33944338-33944579 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 182-421 |
| Cow position: | chr24:10300016-10300263 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 17, 57 |
| Conread position: | 182-421 |
| Cow position: | chr24:24457314-24457058 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 182-421 |
| Cow position: | chr24:35576598-35576362 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 15 |
| Conread position: | 182-422 |
| Cow position: | chr24:3493821-3494056 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 90, 15 |
| Conread position: | 182-422 |
| Cow position: | chr24:18485062-18484804 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 190 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 10, 133 |
| Conread position: | 182-433 |
| Cow position: | chr24:15861665-15861395 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 194 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 13, 257 |
| Conread position: | 182-433 |
| Cow position: | chr24:24491084-24490839 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 116 |
| Conread position: | 182-435 |
| Cow position: | chr24:28721826-28722067 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 187 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 90, 10 |
| Conread position: | 182-439 |
| Cow position: | chr24:20733955-20734238 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 10, 52 |
| Conread position: | 183-411 |
| Cow position: | chr24:16994818-16995053 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 88, 57 |
| Conread position: | 183-415 |
| Cow position: | chr24:17104636-17104393 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 183-419 |
| Cow position: | chr24:33098538-33098290 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 19, 238 |
| Conread position: | 183-423 |
| Cow position: | chr24:32054597-32054831 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 190 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 146, 87 |
| Conread position: | 183-434 |
| Cow position: | chr24:27202026-27202267 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 193 |
| Alignm E-value: | 5e-39 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 184-332 |
| Cow position: | chr24:12452725-12452871 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 84, 12 |
| Conread position: | 184-333 |
| Cow position: | chr24:32369982-32369826 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 184-339 |
| Cow position: | chr24:43200333-43200181 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 184-347 |
| Cow position: | chr24:15373343-15373508 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 85, 15 |
| Conread position: | 184-383 |
| Cow position: | chr24:29782102-29782302 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 146, 107 |
| Conread position: | 184-408 |
| Cow position: | chr24:17832876-17832657 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 171, 12 |
| Conread position: | 184-412 |
| Cow position: | chr24:16268191-16267977 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 12, 68 |
| Conread position: | 184-415 |
| Cow position: | chr24:18732165-18731929 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 87, 202 |
| Conread position: | 184-415 |
| Cow position: | chr24:22079399-22079642 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 11, 71 |
| Conread position: | 184-416 |
| Cow position: | chr24:19800784-19801019 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 118, 86 |
| Conread position: | 184-421 |
| Cow position: | chr24:7777683-7777449 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 184-422 |
| Cow position: | chr24:11840125-11840370 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 193 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 87, 7 |
| Conread position: | 184-422 |
| Cow position: | chr24:16089165-16089416 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 183 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 31, 15 |
| Conread position: | 184-425 |
| Cow position: | chr24:41423546-41423774 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 62, 12 |
| Conread position: | 184-439 |
| Cow position: | chr24:28699987-28700243 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 71, 164 |
| Conread position: | 185-330 |
| Cow position: | chr24:29679371-29679227 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 185-411 |
| Cow position: | chr24:20801408-20801170 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 187-413 |
| Cow position: | chr24:41405830-41406071 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 188 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 188-346 |
| Cow position: | chr24:29170902-29171063 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 188-422 |
| Cow position: | chr24:27874537-27874758 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 11 |
| Conread position: | 189-422 |
| Cow position: | chr24:34896755-34896526 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 82, 10 |
| Conread position: | 190-382 |
| Cow position: | chr24:37975038-37974847 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 116 |
| Conread position: | 190-422 |
| Cow position: | chr24:13587049-13586816 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 82, 129 |
| Conread position: | 190-422 |
| Cow position: | chr24:30229417-30229660 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 79, 9 |
| Conread position: | 190-422 |
| Cow position: | chr24:41980716-41980485 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 79, 50 |
| Conread position: | 190-433 |
| Cow position: | chr24:18750648-18750908 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 193 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 50, 9 |
| Conread position: | 190-441 |
| Cow position: | chr24:17311273-17311023 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 194, 9 |
| Conread position: | 191-324 |
| Cow position: | chr24:8886851-8886990 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 191-332 |
| Cow position: | chr24:27900675-27900815 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 109 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 77, 104 |
| Conread position: | 191-342 |
| Cow position: | chr24:28289309-28289156 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 78, 108 |
| Conread position: | 191-343 |
| Cow position: | chr24:32070907-32071060 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 62 |
| Conread position: | 191-343 |
| Cow position: | chr24:40404864-40404713 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 110, 0 |
| Conread position: | 191-375 |
| Cow position: | chr24:19261433-19261252 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 78, 95 |
| Conread position: | 191-412 |
| Cow position: | chr24:28355742-28355528 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 191-416 |
| Cow position: | chr24:6151736-6151956 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 71, 62 |
| Conread position: | 192-328 |
| Cow position: | chr24:34555981-34556118 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 77, 112 |
| Conread position: | 192-412 |
| Cow position: | chr24:43832474-43832699 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 79, 31 |
| Conread position: | 193-332 |
| Cow position: | chr24:29389177-29389322 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 193-399 |
| Cow position: | chr24:32124689-32124492 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 193-411 |
| Cow position: | chr24:26001333-26001562 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 193-416 |
| Cow position: | chr24:27844582-27844352 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 143 |
| Conread position: | 193-416 |
| Cow position: | chr24:30314080-30313849 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 77, 111 |
| Conread position: | 193-427 |
| Cow position: | chr24:28233991-28234233 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 136, 0 |
| Conread position: | 194-383 |
| Cow position: | chr24:390051-390238 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 77, 57 |
| Conread position: | 194-412 |
| Cow position: | chr24:23667171-23666949 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 96, 57 |
| Conread position: | 194-415 |
| Cow position: | chr24:2402421-2402198 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 78, 130 |
| Conread position: | 194-416 |
| Cow position: | chr24:27713459-27713230 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 195-342 |
| Cow position: | chr24:28327131-28326982 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 116 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 56 |
| Conread position: | 195-359 |
| Cow position: | chr24:29673470-29673634 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 74, 115 |
| Conread position: | 195-375 |
| Cow position: | chr24:27726064-27725881 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 76, 148 |
| Conread position: | 195-400 |
| Cow position: | chr24:29561624-29561415 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 195-405 |
| Cow position: | chr24:15246695-15246489 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 142 |
| Conread position: | 197-334 |
| Cow position: | chr24:15347539-15347681 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 72, 124 |
| Conread position: | 197-417 |
| Cow position: | chr24:12851663-12851876 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 152, 29 |
| Conread position: | 198-342 |
| Cow position: | chr24:28470729-28470582 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 198-432 |
| Cow position: | chr24:13948074-13948318 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 127, 0 |
| Conread position: | 199-342 |
| Cow position: | chr24:33465666-33465524 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 199-375 |
| Cow position: | chr24:16118312-16118494 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 72, 154 |
| Conread position: | 201-408 |
| Cow position: | chr24:42726404-42726630 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 201-412 |
| Cow position: | chr24:6102784-6102999 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 141, 201 |
| Conread position: | 201-419 |
| Cow position: | chr24:22999971-23000184 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 118, 57 |
| Conread position: | 202-383 |
| Cow position: | chr24:32230553-32230366 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 36, 154 |
| Conread position: | 203-416 |
| Cow position: | chr24:34465550-34465324 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 66, 197 |
| Conread position: | 206-417 |
| Cow position: | chr24:19186901-19187113 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 65, 42 |
| Conread position: | 207-367 |
| Cow position: | chr24:41068220-41068384 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 207-446 |
| Cow position: | chr24:18668538-18668788 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 63, 207 |
| Conread position: | 210-441 |
| Cow position: | chr24:17309174-17308938 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 60, 78 |
| Conread position: | 211-383 |
| Cow position: | chr24:32891080-32890909 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 60, 136 |
| Conread position: | 212-342 |
| Cow position: | chr24:18333164-18333038 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 212-458 |
| Cow position: | chr24:26848766-26848517 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 59, 21 |
| Conread position: | 214-382 |
| Cow position: | chr24:22567070-22567243 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 214-383 |
| Cow position: | chr24:28990528-28990700 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 57, 131 |
| Conread position: | 216-383 |
| Cow position: | chr24:41566126-41565962 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 124, 42 |
| Conread position: | 216-433 |
| Cow position: | chr24:36286538-36286766 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 55, 135 |
| Conread position: | 217-417 |
| Cow position: | chr24:5152493-5152707 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 55, 89 |
| Conread position: | 220-408 |
| Cow position: | chr24:39218580-39218380 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 220-411 |
| Cow position: | chr24:27553067-27553275 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 9, 78 |
| Conread position: | 220-416 |
| Cow position: | chr24:27940648-27940449 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 53, 117 |
| Conread position: | 221-436 |
| Cow position: | chr24:17689637-17689409 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 48, 94 |
| Conread position: | 222-418 |
| Cow position: | chr24:13610286-13610482 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 87, 141 |
| Conread position: | 224-422 |
| Cow position: | chr24:32979191-32978989 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 45, 77 |
| Conread position: | 228-416 |
| Cow position: | chr24:28024260-28024447 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 123 |
| Conread position: | 228-417 |
| Cow position: | chr24:31383101-31383290 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 41, 25 |
| Conread position: | 228-422 |
| Cow position: | chr24:27810139-27810333 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 43, 24 |
| Conread position: | 233-342 |
| Cow position: | chr24:32818314-32818206 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 88 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 234-421 |
| Cow position: | chr24:39961011-39960824 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 37, 54 |
| Conread position: | 240-422 |
| Cow position: | chr24:25971081-25970898 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 32, 95 |
| Conread position: | 242-437 |
| Cow position: | chr24:15340456-15340266 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 268-420 |
| Cow position: | chr24:34768544-34768392 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 23, 28 |
| Conread position: | 268-420 |
| Cow position: | chr24:39333561-39333714 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 115 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 59, 129 |
| Conread position: | 268-439 |
| Cow position: | chr24:27719503-27719338 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 61, 78 |
| Conread position: | 268-472 |
| Cow position: | chr24:35217418-35217622 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 58, 141 |
Show alignments to all cow chromosomes.