Cow genome map
| Conread name: | rpigcf0_004991.y1 |
| Conread position: | 164-450 |
| Cow position: | chr25:24203062-24202773 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 208 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 31, 17 |
| Conread position: | 166-383 |
| Cow position: | chr25:6258829-6259044 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 11, 15 |
| Conread position: | 166-421 |
| Cow position: | chr25:12097781-12098044 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 188 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 132, 104 |
| Conread position: | 167-357 |
| Cow position: | chr25:8961715-8961906 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 167-368 |
| Cow position: | chr25:7084137-7084334 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 30, 10 |
| Conread position: | 168-435 |
| Cow position: | chr25:26700973-26701227 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 143, 0 |
| Conread position: | 170-376 |
| Cow position: | chr25:18988337-18988533 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 170-408 |
| Cow position: | chr25:36716866-36717106 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 170-417 |
| Cow position: | chr25:26087465-26087723 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 73, 13 |
| Conread position: | 173-408 |
| Cow position: | chr25:9269294-9269534 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 7, 82 |
| Conread position: | 177-416 |
| Cow position: | chr25:18760757-18760509 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 18, 118 |
| Conread position: | 177-422 |
| Cow position: | chr25:11038306-11038560 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 94, 219 |
| Conread position: | 179-342 |
| Cow position: | chr25:18905838-18906005 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 179-343 |
| Cow position: | chr25:10218095-10217928 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 92, 115 |
| Conread position: | 179-382 |
| Cow position: | chr25:16867192-16867404 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 179-420 |
| Cow position: | chr25:24651498-24651262 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 91, 20 |
| Conread position: | 179-422 |
| Cow position: | chr25:7726617-7726873 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 93, 20 |
| Conread position: | 179-422 |
| Cow position: | chr25:40904875-40904621 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 90, 20 |
| Conread position: | 179-423 |
| Cow position: | chr25:35052669-35052420 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 9, 21 |
| Conread position: | 180-417 |
| Cow position: | chr25:33555561-33555811 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 180-422 |
| Cow position: | chr25:28597658-28597397 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 248 |
| Conread position: | 181-348 |
| Cow position: | chr25:33256311-33256478 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 88, 21 |
| Conread position: | 181-422 |
| Cow position: | chr25:15273627-15273871 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 168 |
| Conread position: | 182-311 |
| Cow position: | chr25:9349323-9349195 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 182-336 |
| Cow position: | chr25:12840765-12840604 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 182-343 |
| Cow position: | chr25:23817886-23817720 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 9, 151 |
| Conread position: | 182-368 |
| Cow position: | chr25:14196817-14197008 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 17, 116 |
| Conread position: | 182-382 |
| Cow position: | chr25:7380882-7380678 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 89, 117 |
| Conread position: | 182-382 |
| Cow position: | chr25:17403441-17403635 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 182-383 |
| Cow position: | chr25:13443456-13443247 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 14, 38 |
| Conread position: | 182-383 |
| Cow position: | chr25:20008091-20008294 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 65, 15 |
| Conread position: | 182-384 |
| Cow position: | chr25:12807000-12807204 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 156 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 166, 39 |
| Conread position: | 182-385 |
| Cow position: | chr25:23917800-23918005 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 60 |
| Conread position: | 182-408 |
| Cow position: | chr25:11276508-11276741 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 89, 15 |
| Conread position: | 182-408 |
| Cow position: | chr25:14513069-14513300 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 12, 115 |
| Conread position: | 182-409 |
| Cow position: | chr25:10504381-10504151 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 13, 72 |
| Conread position: | 182-412 |
| Cow position: | chr25:14791711-14791952 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 14, 160 |
| Conread position: | 182-412 |
| Cow position: | chr25:26654867-26655090 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 13, 66 |
| Conread position: | 182-415 |
| Cow position: | chr25:8157549-8157314 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 13, 68 |
| Conread position: | 182-416 |
| Cow position: | chr25:11585474-11585731 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 182-416 |
| Cow position: | chr25:22730786-22731027 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 73, 104 |
| Conread position: | 182-417 |
| Cow position: | chr25:1838194-1838447 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 182-420 |
| Cow position: | chr25:7216786-7217022 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 182-420 |
| Cow position: | chr25:17704701-17704945 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 86, 189 |
| Conread position: | 182-420 |
| Cow position: | chr25:21893293-21893539 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 10, 159 |
| Conread position: | 182-421 |
| Cow position: | chr25:11956761-11957012 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 87, 170 |
| Conread position: | 182-422 |
| Cow position: | chr25:17474556-17474315 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 62 |
| Conread position: | 182-422 |
| Cow position: | chr25:24862833-24863065 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 87, 17 |
| Conread position: | 182-435 |
| Cow position: | chr25:1824140-1823881 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 86, 211 |
| Conread position: | 182-437 |
| Cow position: | chr25:30619021-30619289 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 211 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 259 |
| Conread position: | 182-444 |
| Cow position: | chr25:20069680-20069947 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 200 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 117, 10 |
| Conread position: | 183-342 |
| Cow position: | chr25:28187987-28187825 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 13, 35 |
| Conread position: | 183-382 |
| Cow position: | chr25:23245044-23244845 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 88, 154 |
| Conread position: | 183-383 |
| Cow position: | chr25:40321328-40321134 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 86, 21 |
| Conread position: | 183-413 |
| Cow position: | chr25:19679313-19679550 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 86, 139 |
| Conread position: | 183-416 |
| Cow position: | chr25:26679186-26679428 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 183-419 |
| Cow position: | chr25:13272527-13272774 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 183-422 |
| Cow position: | chr25:38957919-38958152 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 52 |
| Conread position: | 184-334 |
| Cow position: | chr25:21894927-21894772 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 117 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 184-336 |
| Cow position: | chr25:21266948-21267101 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 114 |
| Conread position: | 184-342 |
| Cow position: | chr25:36762063-36762225 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 184-363 |
| Cow position: | chr25:22751050-22750863 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 184-382 |
| Cow position: | chr25:36081836-36082026 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 87, 49 |
| Conread position: | 184-383 |
| Cow position: | chr25:17119703-17119904 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 18 |
| Conread position: | 184-422 |
| Cow position: | chr25:16921838-16921585 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 182 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 84, 115 |
| Conread position: | 184-431 |
| Cow position: | chr25:25716610-25716850 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 201, 15 |
| Conread position: | 184-436 |
| Cow position: | chr25:30816845-30817113 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 9, 118 |
| Conread position: | 186-342 |
| Cow position: | chr25:26051862-26052023 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 11, 143 |
| Conread position: | 186-439 |
| Cow position: | chr25:18201964-18201702 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 10, 28 |
| Conread position: | 187-342 |
| Cow position: | chr25:23779368-23779210 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 187-344 |
| Cow position: | chr25:30656684-30656525 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 109, 104 |
| Conread position: | 188-382 |
| Cow position: | chr25:21245641-21245438 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 189-390 |
| Cow position: | chr25:22508342-22508138 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 115 |
| Conread position: | 189-422 |
| Cow position: | chr25:26225065-26224828 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 79, 157 |
| Conread position: | 190-368 |
| Cow position: | chr25:36017507-36017679 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 59 |
| Conread position: | 190-417 |
| Cow position: | chr25:1840289-1840524 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 159 |
| Conread position: | 190-417 |
| Cow position: | chr25:6474122-6473872 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 79, 109 |
| Conread position: | 190-417 |
| Cow position: | chr25:22298600-22298835 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 112 |
| Conread position: | 190-418 |
| Cow position: | chr25:24984444-24984224 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 82, 9 |
| Conread position: | 190-420 |
| Cow position: | chr25:17658577-17658807 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 80, 9 |
| Conread position: | 190-423 |
| Cow position: | chr25:35109304-35109069 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 79, 164 |
| Conread position: | 191-333 |
| Cow position: | chr25:20133350-20133203 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 191-336 |
| Cow position: | chr25:61616-61764 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 191-416 |
| Cow position: | chr25:34379139-34378913 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 76, 175 |
| Conread position: | 192-325 |
| Cow position: | chr25:36019698-36019566 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 192-332 |
| Cow position: | chr25:9939289-9939151 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 97, 63 |
| Conread position: | 192-342 |
| Cow position: | chr25:23505020-23505172 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 12 |
| Conread position: | 192-382 |
| Cow position: | chr25:13222868-13223057 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 79, 10 |
| Conread position: | 192-386 |
| Cow position: | chr25:19478642-19478832 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 144 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 77, 155 |
| Conread position: | 193-342 |
| Cow position: | chr25:31762640-31762487 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 193-383 |
| Cow position: | chr25:9615804-9615998 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 193-416 |
| Cow position: | chr25:18929224-18929005 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 158 |
| Conread position: | 193-422 |
| Cow position: | chr25:4521869-4521634 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 182, 76 |
| Conread position: | 193-423 |
| Cow position: | chr25:33457700-33457933 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 76, 142 |
| Conread position: | 194-412 |
| Cow position: | chr25:9002641-9002867 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 77, 97 |
| Conread position: | 194-421 |
| Cow position: | chr25:9990141-9989906 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 75, 200 |
| Conread position: | 195-340 |
| Cow position: | chr25:4009063-4009211 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 195-375 |
| Cow position: | chr25:26160935-26161120 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 73, 170 |
| Conread position: | 197-397 |
| Cow position: | chr25:33776038-33776230 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 72, 36 |
| Conread position: | 198-332 |
| Cow position: | chr25:4221630-4221493 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 105 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 198-332 |
| Cow position: | chr25:13503406-13503544 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 198-339 |
| Cow position: | chr25:22241943-22242080 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 198-421 |
| Cow position: | chr25:5637412-5637181 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 199-321 |
| Cow position: | chr25:10364360-10364238 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 101 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 70, 105 |
| Conread position: | 199-325 |
| Cow position: | chr25:5920055-5920183 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 70, 100 |
| Conread position: | 199-342 |
| Cow position: | chr25:36840370-36840517 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 37, 84 |
| Conread position: | 199-408 |
| Cow position: | chr25:7581456-7581228 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 72, 8 |
| Conread position: | 199-410 |
| Cow position: | chr25:27801256-27801475 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 92, 54 |
| Conread position: | 200-341 |
| Cow position: | chr25:36120472-36120617 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 200-383 |
| Cow position: | chr25:26072582-26072403 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 200-412 |
| Cow position: | chr25:10643334-10643118 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 71, 179 |
| Conread position: | 202-373 |
| Cow position: | chr25:3744769-3744587 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 7, 0 |
| Conread position: | 202-423 |
| Cow position: | chr25:5807920-5808157 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 12, 105 |
| Conread position: | 203-433 |
| Cow position: | chr25:433070-432828 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 204-342 |
| Cow position: | chr25:15218115-15218252 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 113 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 209-412 |
| Cow position: | chr25:36555705-36555501 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 63, 90 |
| Conread position: | 210-383 |
| Cow position: | chr25:31514166-31514344 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 214-417 |
| Cow position: | chr25:20202902-20203110 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 214-417 |
| Cow position: | chr25:36873067-36872851 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 57, 142 |
| Conread position: | 217-416 |
| Cow position: | chr25:15573380-15573579 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 169 |
| Conread position: | 219-425 |
| Cow position: | chr25:2662393-2662605 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 52, 43 |
| Conread position: | 221-424 |
| Cow position: | chr25:5922707-5922504 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 70, 48 |
| Conread position: | 225-413 |
| Cow position: | chr25:23584853-23585042 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 104, 46 |
| Conread position: | 228-438 |
| Cow position: | chr25:36369822-36370046 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 228-438 |
| Cow position: | chr25:36375513-36375737 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 42, 62 |
| Conread position: | 230-382 |
| Cow position: | chr25:23323495-23323656 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 233-437 |
| Cow position: | chr25:7403333-7403112 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 235-383 |
| Cow position: | chr25:26156767-26156625 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 237-441 |
| Cow position: | chr25:1982970-1982759 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 34, 64 |
| Conread position: | 239-382 |
| Cow position: | chr25:10817408-10817271 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 32, 97 |
| Conread position: | 240-411 |
| Cow position: | chr25:18026300-18026129 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 9, 15 |
| Conread position: | 242-433 |
| Cow position: | chr25:11373879-11373689 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 174, 11 |
| Conread position: | 255-416 |
| Cow position: | chr25:8596440-8596276 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 16, 143 |
| Conread position: | 255-424 |
| Cow position: | chr25:15305708-15305890 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 16, 58 |
| Conread position: | 260-409 |
| Cow position: | chr25:23998004-23997858 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 268-421 |
| Cow position: | chr25:21082361-21082199 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 268-422 |
| Cow position: | chr25:6891268-6891110 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 268-430 |
| Cow position: | chr25:23769841-23769681 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 268-432 |
| Cow position: | chr25:2586219-2586373 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 276-422 |
| Cow position: | chr25:36785635-36785491 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 15, 60 |
Show alignments to all cow chromosomes.