Cow genome map
| Conread name: | rpigcf0_004991.y1 |
| Conread position: | 163-332 |
| Cow position: | chr27:24371257-24371087 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 163-383 |
| Cow position: | chr27:24477433-24477220 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 56 |
| Conread position: | 166-332 |
| Cow position: | chr27:20037103-20037270 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 166-383 |
| Cow position: | chr27:26437107-26437326 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 21, 13 |
| Conread position: | 166-422 |
| Cow position: | chr27:5553481-5553217 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 103, 16 |
| Conread position: | 169-394 |
| Cow position: | chr27:1768612-1768843 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 21, 51 |
| Conread position: | 169-422 |
| Cow position: | chr27:20584449-20584721 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 177-430 |
| Cow position: | chr27:6241191-6241458 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 94, 13 |
| Conread position: | 178-421 |
| Cow position: | chr27:20897027-20897273 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 203, 14 |
| Conread position: | 179-332 |
| Cow position: | chr27:10653688-10653529 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 179-383 |
| Cow position: | chr27:25152084-25151883 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 150, 12 |
| Conread position: | 179-407 |
| Cow position: | chr27:20045889-20045657 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 123, 12 |
| Conread position: | 179-408 |
| Cow position: | chr27:26807561-26807788 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 57, 20 |
| Conread position: | 179-416 |
| Cow position: | chr27:26793785-26794032 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 90, 12 |
| Conread position: | 179-421 |
| Cow position: | chr27:11435320-11435580 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 16, 117 |
| Conread position: | 179-422 |
| Cow position: | chr27:10307300-10307557 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 149, 0 |
| Conread position: | 179-423 |
| Cow position: | chr27:18507650-18507401 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 21 |
| Conread position: | 179-432 |
| Cow position: | chr27:13252010-13251768 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 34 |
| Conread position: | 179-433 |
| Cow position: | chr27:7649582-7649855 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 74, 12 |
| Conread position: | 180-422 |
| Cow position: | chr27:19388017-19387768 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 91, 70 |
| Conread position: | 180-433 |
| Cow position: | chr27:426971-426705 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 181-341 |
| Cow position: | chr27:31017833-31017990 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 181-342 |
| Cow position: | chr27:30988794-30988632 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 18 |
| Conread position: | 182-324 |
| Cow position: | chr27:18593266-18593125 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 108 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 182-324 |
| Cow position: | chr27:20497208-20497058 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 14, 66 |
| Conread position: | 182-325 |
| Cow position: | chr27:22225597-22225741 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 182-333 |
| Cow position: | chr27:25277138-25276986 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 182-340 |
| Cow position: | chr27:27064442-27064603 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 182-342 |
| Cow position: | chr27:20085561-20085391 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 87, 39 |
| Conread position: | 182-351 |
| Cow position: | chr27:16088806-16088630 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 14, 142 |
| Conread position: | 182-382 |
| Cow position: | chr27:23560032-23560234 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 157 |
| Conread position: | 182-382 |
| Cow position: | chr27:26188827-26188622 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 22, 72 |
| Conread position: | 182-383 |
| Cow position: | chr27:6541626-6541429 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 182-383 |
| Cow position: | chr27:19660932-19660722 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 12, 185 |
| Conread position: | 182-383 |
| Cow position: | chr27:23860158-23859957 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 182-384 |
| Cow position: | chr27:30872062-30872264 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 90, 57 |
| Conread position: | 182-388 |
| Cow position: | chr27:7974171-7973964 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 14, 52 |
| Conread position: | 182-388 |
| Cow position: | chr27:22454781-22454983 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 87, 10 |
| Conread position: | 182-411 |
| Cow position: | chr27:28260540-28260762 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 89, 17 |
| Conread position: | 182-415 |
| Cow position: | chr27:19589472-19589236 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 75, 48 |
| Conread position: | 182-419 |
| Cow position: | chr27:30868743-30869001 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 86, 248 |
| Conread position: | 182-422 |
| Cow position: | chr27:20812903-20812670 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 192 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 15, 156 |
| Conread position: | 182-422 |
| Cow position: | chr27:24227797-24228060 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 184 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 58, 47 |
| Conread position: | 182-422 |
| Cow position: | chr27:26509162-26509410 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 155, 15 |
| Conread position: | 182-422 |
| Cow position: | chr27:30915004-30914751 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 90, 16 |
| Conread position: | 182-423 |
| Cow position: | chr27:1636938-1637170 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 88, 109 |
| Conread position: | 182-423 |
| Cow position: | chr27:2592538-2592278 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 193 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 80, 15 |
| Conread position: | 182-423 |
| Cow position: | chr27:25809524-25809771 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 109, 15 |
| Conread position: | 182-423 |
| Cow position: | chr27:26111913-26112173 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 191 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 9, 112 |
| Conread position: | 182-423 |
| Cow position: | chr27:29380853-29380605 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 14, 78 |
| Conread position: | 182-432 |
| Cow position: | chr27:11561773-11561508 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 86, 172 |
| Conread position: | 182-433 |
| Cow position: | chr27:24303938-24303676 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 202 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 89, 10 |
| Conread position: | 182-435 |
| Cow position: | chr27:29593631-29593897 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 195 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 15, 78 |
| Conread position: | 182-492 |
| Cow position: | chr27:23128453-23128151 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 10, 32 |
| Conread position: | 183-341 |
| Cow position: | chr27:21393511-21393671 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 86, 154 |
| Conread position: | 183-341 |
| Cow position: | chr27:31148757-31148595 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 137 |
| Conread position: | 183-342 |
| Cow position: | chr27:17646172-17646334 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 119 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 183-342 |
| Cow position: | chr27:27641016-27641176 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 124 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 88, 121 |
| Conread position: | 183-383 |
| Cow position: | chr27:24331716-24331508 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 85, 54 |
| Conread position: | 183-408 |
| Cow position: | chr27:19546517-19546761 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 16, 197 |
| Conread position: | 183-418 |
| Cow position: | chr27:13940559-13940801 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 18, 124 |
| Conread position: | 183-421 |
| Cow position: | chr27:23594318-23594067 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 13, 239 |
| Conread position: | 183-422 |
| Cow position: | chr27:17397455-17397704 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 16, 167 |
| Conread position: | 183-422 |
| Cow position: | chr27:26226296-26226540 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 86, 14 |
| Conread position: | 183-422 |
| Cow position: | chr27:27438510-27438762 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 65, 14 |
| Conread position: | 183-423 |
| Cow position: | chr27:11480641-11480882 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 89, 9 |
| Conread position: | 183-423 |
| Cow position: | chr27:16103802-16103567 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 183-460 |
| Cow position: | chr27:18558354-18558079 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 191 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 184-353 |
| Cow position: | chr27:6302474-6302643 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 87, 18 |
| Conread position: | 184-363 |
| Cow position: | chr27:26413258-26413438 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 15, 157 |
| Conread position: | 184-413 |
| Cow position: | chr27:19509008-19508767 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 9, 27 |
| Conread position: | 184-417 |
| Cow position: | chr27:2957401-2957168 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 35, 57 |
| Conread position: | 184-421 |
| Cow position: | chr27:11982653-11982901 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 87, 8 |
| Conread position: | 184-421 |
| Cow position: | chr27:23632591-23632356 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 184-422 |
| Cow position: | chr27:28921901-28922149 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 184-436 |
| Cow position: | chr27:29831703-29831977 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 192 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 85, 20 |
| Conread position: | 185-342 |
| Cow position: | chr27:17918320-17918479 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 86, 7 |
| Conread position: | 186-340 |
| Cow position: | chr27:4386067-4386225 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 186-342 |
| Cow position: | chr27:4155989-4155833 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 83, 124 |
| Conread position: | 186-420 |
| Cow position: | chr27:23890932-23890692 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 11, 193 |
| Conread position: | 187-342 |
| Cow position: | chr27:1290858-1291014 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 135 |
| Conread position: | 187-343 |
| Cow position: | chr27:27673022-27673182 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 9, 66 |
| Conread position: | 188-389 |
| Cow position: | chr27:30489420-30489618 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 81, 11 |
| Conread position: | 189-381 |
| Cow position: | chr27:22559838-22560030 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 152, 13 |
| Conread position: | 189-423 |
| Cow position: | chr27:28478570-28478338 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 161 |
| Conread position: | 190-381 |
| Cow position: | chr27:14303726-14303536 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 54, 149 |
| Conread position: | 190-383 |
| Cow position: | chr27:30765019-30764827 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 190-417 |
| Cow position: | chr27:15925334-15925098 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 190-422 |
| Cow position: | chr27:6319908-6319680 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 190-422 |
| Cow position: | chr27:9977673-9977443 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 191-342 |
| Cow position: | chr27:30359395-30359241 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 191-372 |
| Cow position: | chr27:30908661-30908474 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 96 |
| Conread position: | 191-383 |
| Cow position: | chr27:13317986-13318183 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 78, 114 |
| Conread position: | 191-420 |
| Cow position: | chr27:15315504-15315271 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 80, 11 |
| Conread position: | 192-383 |
| Cow position: | chr27:16705242-16705047 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 10, 152 |
| Conread position: | 192-433 |
| Cow position: | chr27:22220540-22220282 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 77, 10 |
| Conread position: | 193-336 |
| Cow position: | chr27:27038857-27038997 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 193-342 |
| Cow position: | chr27:6674265-6674115 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 76, 69 |
| Conread position: | 193-383 |
| Cow position: | chr27:15865593-15865404 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 78, 147 |
| Conread position: | 193-383 |
| Cow position: | chr27:22489263-22489066 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 193-383 |
| Cow position: | chr27:31386643-31386836 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 6, 146 |
| Conread position: | 193-421 |
| Cow position: | chr27:8790755-8790997 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 66, 173 |
| Conread position: | 194-390 |
| Cow position: | chr27:29319396-29319201 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 132 |
| Conread position: | 194-420 |
| Cow position: | chr27:15454194-15453962 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 5, 221 |
| Conread position: | 194-421 |
| Cow position: | chr27:15668786-15669027 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 194-421 |
| Cow position: | chr27:22245611-22245389 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 77, 151 |
| Conread position: | 194-433 |
| Cow position: | chr27:18435148-18435385 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 76, 153 |
| Conread position: | 195-383 |
| Cow position: | chr27:1353567-1353374 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 74, 104 |
| Conread position: | 195-415 |
| Cow position: | chr27:26565774-26565547 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 99 |
| Conread position: | 195-423 |
| Cow position: | chr27:20354574-20354354 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 154, 58 |
| Conread position: | 196-383 |
| Cow position: | chr27:26489926-26490111 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 73, 7 |
| Conread position: | 197-420 |
| Cow position: | chr27:2847836-2847621 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 56, 116 |
| Conread position: | 197-423 |
| Cow position: | chr27:7935174-7935405 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 72, 192 |
| Conread position: | 198-339 |
| Cow position: | chr27:12191498-12191642 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 117 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 71, 23 |
| Conread position: | 198-342 |
| Cow position: | chr27:15643154-15643009 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 75, 57 |
| Conread position: | 198-383 |
| Cow position: | chr27:26121741-26121552 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 198-412 |
| Cow position: | chr27:7412374-7412150 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 73, 154 |
| Conread position: | 198-416 |
| Cow position: | chr27:23148147-23147917 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 71, 217 |
| Conread position: | 198-422 |
| Cow position: | chr27:7343447-7343681 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 74, 117 |
| Conread position: | 199-342 |
| Cow position: | chr27:28034871-28035013 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 199-383 |
| Cow position: | chr27:28518278-28518087 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 28, 108 |
| Conread position: | 199-417 |
| Cow position: | chr27:20514799-20514575 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 199-418 |
| Cow position: | chr27:4944534-4944755 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 70, 130 |
| Conread position: | 199-432 |
| Cow position: | chr27:27558524-27558766 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 42, 81 |
| Conread position: | 200-361 |
| Cow position: | chr27:22423495-22423330 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 200-419 |
| Cow position: | chr27:29388651-29388422 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 152 |
| Conread position: | 202-336 |
| Cow position: | chr27:23216341-23216476 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 202-374 |
| Cow position: | chr27:7731280-7731458 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 66, 97 |
| Conread position: | 202-383 |
| Cow position: | chr27:15332318-15332494 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 70, 147 |
| Conread position: | 203-412 |
| Cow position: | chr27:212933-212707 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 56, 34 |
| Conread position: | 205-383 |
| Cow position: | chr27:12596745-12596576 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 21, 49 |
| Conread position: | 207-422 |
| Cow position: | chr27:20548783-20548567 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 64, 181 |
| Conread position: | 207-454 |
| Cow position: | chr27:20612494-20612243 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 84 |
| Conread position: | 211-418 |
| Cow position: | chr27:26481227-26481447 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 214-433 |
| Cow position: | chr27:19452967-19452745 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 57, 175 |
| Conread position: | 215-420 |
| Cow position: | chr27:6162446-6162655 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 114 |
| Conread position: | 216-423 |
| Cow position: | chr27:24223915-24223702 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 43, 136 |
| Conread position: | 217-408 |
| Cow position: | chr27:17102858-17102660 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 78 |
| Conread position: | 221-422 |
| Cow position: | chr27:19576365-19576575 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 51, 119 |
| Conread position: | 221-423 |
| Cow position: | chr27:26400763-26400974 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 50, 166 |
| Conread position: | 223-342 |
| Cow position: | chr27:17918761-17918883 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 224-421 |
| Cow position: | chr27:29236519-29236305 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 47, 0 |
| Conread position: | 228-382 |
| Cow position: | chr27:232505-232346 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 228-401 |
| Cow position: | chr27:1184226-1184406 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 45, 109 |
| Conread position: | 228-422 |
| Cow position: | chr27:26118451-26118254 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 40, 162 |
| Conread position: | 228-422 |
| Cow position: | chr27:26236277-26236077 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 41, 67 |
| Conread position: | 232-422 |
| Cow position: | chr27:18491503-18491314 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 39, 94 |
| Conread position: | 235-422 |
| Cow position: | chr27:20048578-20048394 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 33, 59 |
| Conread position: | 239-422 |
| Cow position: | chr27:15434261-15434078 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 175, 14 |
| Conread position: | 241-421 |
| Cow position: | chr27:30884966-30884776 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 27, 178 |
| Conread position: | 243-414 |
| Cow position: | chr27:28177785-28177953 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 247-408 |
| Cow position: | chr27:23495777-23495935 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 22, 116 |
| Conread position: | 255-423 |
| Cow position: | chr27:11528855-11528675 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 16, 98 |
| Conread position: | 255-454 |
| Cow position: | chr27:7847637-7847441 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 268-437 |
| Cow position: | chr27:25382243-25382404 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 268-444 |
| Cow position: | chr27:22213066-22212900 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 172, 24 |
| Conread position: | 271-408 |
| Cow position: | chr27:17948174-17948035 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 33, 76 |
| Conread position: | 278-422 |
| Cow position: | chr27:14965708-14965851 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 105 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 132, 0 |
| Conread position: | 303-415 |
| Cow position: | chr27:1058951-1059063 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 94 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 46, 50 |
Show alignments to all cow chromosomes.