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Cow genome map

           
Conread name:
           
rpigcf0_004991.y1
        

               
Conread position:
               
108-347
               

               
Cow position:
               
chr4:51920420-51920664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
145-461
               

               
Cow position:
               
chr4:35638980-35638667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
122, 11
               

               
Conread position:
               
164-342
               

               
Cow position:
               
chr4:25888894-25888720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
166-327
               

               
Cow position:
               
chr4:37935346-37935185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
103, 15
               

               
Conread position:
               
166-332
               

               
Cow position:
               
chr4:32726164-32726329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
102, 15
               

               
Conread position:
               
166-422
               

               
Cow position:
               
chr4:656876-656617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
31, 15
               

               
Conread position:
               
166-422
               

               
Cow position:
               
chr4:49794605-49794852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
105, 15
               

               
Conread position:
               
167-376
               

               
Cow position:
               
chr4:19256631-19256840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
28, 79
               

               
Conread position:
               
168-342
               

               
Cow position:
               
chr4:13608398-13608568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 23
               

               
Conread position:
               
168-417
               

               
Cow position:
               
chr4:37732547-37732282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
168-432
               

               
Cow position:
               
chr4:59873367-59873628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
95, 86
               

               
Conread position:
               
169-332
               

               
Cow position:
               
chr4:38700216-38700052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
99, 21
               

               
Conread position:
               
169-383
               

               
Cow position:
               
chr4:10732164-10732374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
103, 13
               

               
Conread position:
               
170-419
               

               
Cow position:
               
chr4:34630838-34631105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
99, 257
               

               
Conread position:
               
173-417
               

               
Cow position:
               
chr4:3388486-3388738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 28
               

               
Conread position:
               
173-420
               

               
Cow position:
               
chr4:45662570-45662316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
173-423
               

               
Cow position:
               
chr4:49800638-49800895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
156, 29
               

               
Conread position:
               
175-423
               

               
Cow position:
               
chr4:3268419-3268173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 66
               

               
Conread position:
               
179-342
               

               
Cow position:
               
chr4:65175196-65175030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
179-350
               

               
Cow position:
               
chr4:26400909-26401078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 12
               

               
Conread position:
               
179-382
               

               
Cow position:
               
chr4:8770053-8770247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
43, 19
               

               
Conread position:
               
179-391
               

               
Cow position:
               
chr4:5577262-5577051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 115
               

               
Conread position:
               
179-406
               

               
Cow position:
               
chr4:61188923-61188690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
13, 139
               

               
Conread position:
               
179-407
               

               
Cow position:
               
chr4:48104620-48104378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
16, 11
               

               
Conread position:
               
179-416
               

               
Cow position:
               
chr4:46060891-46061144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
93, 126
               

               
Conread position:
               
179-416
               

               
Cow position:
               
chr4:47305024-47305277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
179-417
               

               
Cow position:
               
chr4:32458915-32458658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
17, 131
               

               
Conread position:
               
179-417
               

               
Cow position:
               
chr4:51769058-51769302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
179-421
               

               
Cow position:
               
chr4:9444740-9444492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
18, 128
               

               
Conread position:
               
179-423
               

               
Cow position:
               
chr4:25197548-25197298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 117
               

               
Conread position:
               
179-428
               

               
Cow position:
               
chr4:56590988-56591241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
6, 77
               

               
Conread position:
               
179-435
               

               
Cow position:
               
chr4:52779799-52780060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
10, 21
               

               
Conread position:
               
180-383
               

               
Cow position:
               
chr4:12127687-12127485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
89, 19
               

               
Conread position:
               
180-417
               

               
Cow position:
               
chr4:51728024-51728270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 162
               

               
Conread position:
               
180-422
               

               
Cow position:
               
chr4:40414682-40414424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
15, 162
               

               
Conread position:
               
180-434
               

               
Cow position:
               
chr4:59871430-59871692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
128, 19
               

               
Conread position:
               
181-383
               

               
Cow position:
               
chr4:14500294-14500090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 171
               

               
Conread position:
               
181-418
               

               
Cow position:
               
chr4:570739-570987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
8, 174
               

               
Conread position:
               
181-420
               

               
Cow position:
               
chr4:41899921-41900167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
18, 108
               

               
Conread position:
               
182-311
               

               
Cow position:
               
chr4:65432100-65432234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
182-321
               

               
Cow position:
               
chr4:19313963-19314107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
182-332
               

               
Cow position:
               
chr4:56570759-56570911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 17
               

               
Conread position:
               
182-335
               

               
Cow position:
               
chr4:10056163-10056312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
182-336
               

               
Cow position:
               
chr4:24481718-24481564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
182-336
               

               
Cow position:
               
chr4:51784130-51784289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
182-340
               

               
Cow position:
               
chr4:46591617-46591781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
182-341
               

               
Cow position:
               
chr4:19322128-19321964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
182-341
               

               
Cow position:
               
chr4:45563694-45563860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 29
               

               
Conread position:
               
182-342
               

               
Cow position:
               
chr4:25879350-25879505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
182-342
               

               
Cow position:
               
chr4:45367688-45367854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
182-346
               

               
Cow position:
               
chr4:27344728-27344560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
182-351
               

               
Cow position:
               
chr4:30791923-30792093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
182-353
               

               
Cow position:
               
chr4:13941414-13941583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
109, 16
               

               
Conread position:
               
182-355
               

               
Cow position:
               
chr4:48173089-48173267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
87, 17
               

               
Conread position:
               
182-360
               

               
Cow position:
               
chr4:59377861-59378042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
87, 179
               

               
Conread position:
               
182-363
               

               
Cow position:
               
chr4:22725052-22725226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 41
               

               
Conread position:
               
182-375
               

               
Cow position:
               
chr4:65950607-65950803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
87, 122
               

               
Conread position:
               
182-381
               

               
Cow position:
               
chr4:58248353-58248555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
10, 80
               

               
Conread position:
               
182-383
               

               
Cow position:
               
chr4:6653676-6653878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
14, 138
               

               
Conread position:
               
182-383
               

               
Cow position:
               
chr4:23509545-23509747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 117
               

               
Conread position:
               
182-383
               

               
Cow position:
               
chr4:34383391-34383184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 67
               

               
Conread position:
               
182-383
               

               
Cow position:
               
chr4:36893308-36893522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
182-383
               

               
Cow position:
               
chr4:45013213-45012999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
123, 17
               

               
Conread position:
               
182-408
               

               
Cow position:
               
chr4:508956-508724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
89, 17
               

               
Conread position:
               
182-408
               

               
Cow position:
               
chr4:19102933-19102688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
10, 43
               

               
Conread position:
               
182-408
               

               
Cow position:
               
chr4:46494248-46494489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 10
               

               
Conread position:
               
182-413
               

               
Cow position:
               
chr4:45249924-45250166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
182-417
               

               
Cow position:
               
chr4:12676757-12676992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
200, 10
               

               
Conread position:
               
182-418
               

               
Cow position:
               
chr4:16881411-16881175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
182-418
               

               
Cow position:
               
chr4:27632402-27632640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
147, 10
               

               
Conread position:
               
182-418
               

               
Cow position:
               
chr4:67393046-67393293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
89, 30
               

               
Conread position:
               
182-420
               

               
Cow position:
               
chr4:961703-961463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
15, 159
               

               
Conread position:
               
182-420
               

               
Cow position:
               
chr4:17186397-17186159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
89, 41
               

               
Conread position:
               
182-420
               

               
Cow position:
               
chr4:18756383-18756637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
182-420
               

               
Cow position:
               
chr4:23445097-23444849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
9, 125
               

               
Conread position:
               
182-420
               

               
Cow position:
               
chr4:41370989-41370742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 157
               

               
Conread position:
               
182-421
               

               
Cow position:
               
chr4:13668670-13668415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 112
               

               
Conread position:
               
182-421
               

               
Cow position:
               
chr4:28701313-28701546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
84, 15
               

               
Conread position:
               
182-421
               

               
Cow position:
               
chr4:32259893-32259636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
182-421
               

               
Cow position:
               
chr4:49629432-49629686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:4084498-4084255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
87, 155
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:11897346-11897098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 88
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:13256040-13256269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
137, 15
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:19292672-19292917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 167
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:19501137-19500886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:20142956-20142709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 90
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:22907456-22907702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 14
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:34369500-34369263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
10, 156
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:44612956-44613196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
63, 138
               

               
Conread position:
               
182-422
               

               
Cow position:
               
chr4:44773092-44772846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 129
               

               
Conread position:
               
182-423
               

               
Cow position:
               
chr4:12591262-12591017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 165
               

               
Conread position:
               
182-424
               

               
Cow position:
               
chr4:20147137-20147388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3.99931e-42
               

               
Alignm gaps (pig, cow):
               
90, 10
               

               
Conread position:
               
182-424
               

               
Cow position:
               
chr4:22345071-22344824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
15, 83
               

               
Conread position:
               
182-425
               

               
Cow position:
               
chr4:42232072-42231828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 77
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr4:4085166-4084906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
57, 223
               

               
Conread position:
               
182-433
               

               
Cow position:
               
chr4:27276593-27276332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
10, 33
               

               
Conread position:
               
182-435
               

               
Cow position:
               
chr4:45626671-45626425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 13
               

               
Conread position:
               
182-435
               

               
Cow position:
               
chr4:60363303-60363560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
89, 20
               

               
Conread position:
               
182-436
               

               
Cow position:
               
chr4:32693736-32693995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 162
               

               
Conread position:
               
182-444
               

               
Cow position:
               
chr4:10999755-10999494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
89, 15
               

               
Conread position:
               
182-449
               

               
Cow position:
               
chr4:47038718-47038986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
19, 110
               

               
Conread position:
               
183-319
               

               
Cow position:
               
chr4:33395746-33395606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
183-332
               

               
Cow position:
               
chr4:3850506-3850656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
86, 15
               

               
Conread position:
               
183-347
               

               
Cow position:
               
chr4:54921134-54920968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
183-383
               

               
Cow position:
               
chr4:3837227-3837422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 163
               

               
Conread position:
               
183-412
               

               
Cow position:
               
chr4:203190-202951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 110
               

               
Conread position:
               
183-412
               

               
Cow position:
               
chr4:45837674-45837438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
183-412
               

               
Cow position:
               
chr4:47748366-47748605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
14, 88
               

               
Conread position:
               
183-413
               

               
Cow position:
               
chr4:38822365-38822125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
183-417
               

               
Cow position:
               
chr4:19430314-19430551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 120
               

               
Conread position:
               
183-419
               

               
Cow position:
               
chr4:38935309-38935556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
12, 123
               

               
Conread position:
               
183-421
               

               
Cow position:
               
chr4:38350246-38349993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
85, 16
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr4:19118968-19119221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr4:37691362-37691109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
183-422
               

               
Cow position:
               
chr4:66256639-66256881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
86, 130
               

               
Conread position:
               
183-435
               

               
Cow position:
               
chr4:28772112-28771855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
94, 14
               

               
Conread position:
               
183-445
               

               
Cow position:
               
chr4:33181498-33181768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
86, 16
               

               
Conread position:
               
184-317
               

               
Cow position:
               
chr4:59008400-59008265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
184-336
               

               
Cow position:
               
chr4:45596076-45595922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
184-342
               

               
Cow position:
               
chr4:1824-1986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
15, 116
               

               
Conread position:
               
184-342
               

               
Cow position:
               
chr4:26012349-26012515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
184-342
               

               
Cow position:
               
chr4:44782327-44782489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 64
               

               
Conread position:
               
184-353
               

               
Cow position:
               
chr4:13974016-13973845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
35, 8
               

               
Conread position:
               
184-368
               

               
Cow position:
               
chr4:65650176-65649991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
87, 49
               

               
Conread position:
               
184-383
               

               
Cow position:
               
chr4:45775386-45775176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
184-399
               

               
Cow position:
               
chr4:45074017-45074229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
184-419
               

               
Cow position:
               
chr4:45724821-45725063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
13, 78
               

               
Conread position:
               
184-422
               

               
Cow position:
               
chr4:23526648-23526898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
184-422
               

               
Cow position:
               
chr4:29291472-29291708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-36
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
184-422
               

               
Cow position:
               
chr4:31506069-31505816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
85, 13
               

               
Conread position:
               
184-422
               

               
Cow position:
               
chr4:66547816-66547561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8.99999e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
184-432
               

               
Cow position:
               
chr4:48321986-48322251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
185-339
               

               
Cow position:
               
chr4:13222229-13222073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
84, 19
               

               
Conread position:
               
185-342
               

               
Cow position:
               
chr4:11380238-11380394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
86, 49
               

               
Conread position:
               
185-342
               

               
Cow position:
               
chr4:41301036-41300883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
185-362
               

               
Cow position:
               
chr4:54191044-54191223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
7, 56
               

               
Conread position:
               
185-408
               

               
Cow position:
               
chr4:29805415-29805181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
144, 73
               

               
Conread position:
               
185-417
               

               
Cow position:
               
chr4:45583164-45582925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
112, 68
               

               
Conread position:
               
185-421
               

               
Cow position:
               
chr4:9925674-9925437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
83, 120
               

               
Conread position:
               
185-433
               

               
Cow position:
               
chr4:22546883-22546630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
185-451
               

               
Cow position:
               
chr4:45636121-45636399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 239
               

               
Conread position:
               
186-449
               

               
Cow position:
               
chr4:1985602-1985869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
11, 109
               

               
Conread position:
               
187-342
               

               
Cow position:
               
chr4:36731146-36731305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
187-382
               

               
Cow position:
               
chr4:45862372-45862566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
9, 110
               

               
Conread position:
               
187-408
               

               
Cow position:
               
chr4:38999377-38999604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
51, 110
               

               
Conread position:
               
187-415
               

               
Cow position:
               
chr4:16762771-16762524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
187-417
               

               
Cow position:
               
chr4:12004175-12004407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
111, 66
               

               
Conread position:
               
187-422
               

               
Cow position:
               
chr4:23451138-23450899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
56, 115
               

               
Conread position:
               
187-446
               

               
Cow position:
               
chr4:46597337-46597579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
206, 15
               

               
Conread position:
               
188-409
               

               
Cow position:
               
chr4:48381340-48381568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 11
               

               
Conread position:
               
188-422
               

               
Cow position:
               
chr4:32561788-32562035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
77, 11
               

               
Conread position:
               
188-422
               

               
Cow position:
               
chr4:38210016-38209774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
188-422
               

               
Cow position:
               
chr4:64029077-64029295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
189-342
               

               
Cow position:
               
chr4:9825759-9825602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
82, 10
               

               
Conread position:
               
189-392
               

               
Cow position:
               
chr4:63965029-63964826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
193, 159
               

               
Conread position:
               
189-412
               

               
Cow position:
               
chr4:31023411-31023641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
163, 65
               

               
Conread position:
               
189-421
               

               
Cow position:
               
chr4:2099587-2099822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
83, 203
               

               
Conread position:
               
189-441
               

               
Cow position:
               
chr4:47730817-47731075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
80, 164
               

               
Conread position:
               
190-334
               

               
Cow position:
               
chr4:5460900-5460755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
78, 9
               

               
Conread position:
               
190-341
               

               
Cow position:
               
chr4:61313253-61313099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
190-342
               

               
Cow position:
               
chr4:19098429-19098587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
190-342
               

               
Cow position:
               
chr4:39128501-39128652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
6, 51
               

               
Conread position:
               
190-383
               

               
Cow position:
               
chr4:2774673-2774877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 121
               

               
Conread position:
               
190-383
               

               
Cow position:
               
chr4:39458600-39458813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
9, 111
               

               
Conread position:
               
190-415
               

               
Cow position:
               
chr4:36290585-36290816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
190-416
               

               
Cow position:
               
chr4:59002178-59001943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
79, 13
               

               
Conread position:
               
190-420
               

               
Cow position:
               
chr4:19408037-19407791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
79, 96
               

               
Conread position:
               
190-420
               

               
Cow position:
               
chr4:34641766-34641523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
82, 124
               

               
Conread position:
               
190-427
               

               
Cow position:
               
chr4:27698993-27699236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
82, 19
               

               
Conread position:
               
191-363
               

               
Cow position:
               
chr4:13871861-13872041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
191-382
               

               
Cow position:
               
chr4:68764482-68764672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
80, 49
               

               
Conread position:
               
191-383
               

               
Cow position:
               
chr4:14020461-14020653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
158, 62
               

               
Conread position:
               
191-412
               

               
Cow position:
               
chr4:49158838-49158600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
54, 30
               

               
Conread position:
               
191-416
               

               
Cow position:
               
chr4:29384271-29384045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
191, 143
               

               
Conread position:
               
191-419
               

               
Cow position:
               
chr4:53126075-53126295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
191-422
               

               
Cow position:
               
chr4:2681291-2681531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
191-422
               

               
Cow position:
               
chr4:23600128-23600355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
80, 185
               

               
Conread position:
               
191-433
               

               
Cow position:
               
chr4:19316044-19315794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
126, 158
               

               
Conread position:
               
192-342
               

               
Cow position:
               
chr4:12135965-12135810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
192-342
               

               
Cow position:
               
chr4:47510353-47510499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
192-342
               

               
Cow position:
               
chr4:69543144-69543297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
192-382
               

               
Cow position:
               
chr4:25226911-25227087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 101
               

               
Conread position:
               
192-383
               

               
Cow position:
               
chr4:56498914-56498716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
192-410
               

               
Cow position:
               
chr4:34562344-34562558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 45
               

               
Conread position:
               
192-413
               

               
Cow position:
               
chr4:10968425-10968204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 100
               

               
Conread position:
               
192-417
               

               
Cow position:
               
chr4:7698228-7698463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
79, 144
               

               
Conread position:
               
192-419
               

               
Cow position:
               
chr4:46883711-46883468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
192-420
               

               
Cow position:
               
chr4:60719064-60719292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
192-421
               

               
Cow position:
               
chr4:19542100-19542351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
81, 48
               

               
Conread position:
               
192-421
               

               
Cow position:
               
chr4:43542509-43542292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
77, 103
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr4:20125009-20124777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
10, 160
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr4:22138260-22138014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr4:38946173-38946410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 202
               

               
Conread position:
               
192-422
               

               
Cow position:
               
chr4:45874504-45874260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 113
               

               
Conread position:
               
192-423
               

               
Cow position:
               
chr4:52748492-52748258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
157, 125
               

               
Conread position:
               
193-331
               

               
Cow position:
               
chr4:21874769-21874906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
76, 14
               

               
Conread position:
               
193-399
               

               
Cow position:
               
chr4:20157449-20157254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
78, 44
               

               
Conread position:
               
193-409
               

               
Cow position:
               
chr4:54478955-54478736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
145, 76
               

               
Conread position:
               
193-421
               

               
Cow position:
               
chr4:13344501-13344737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 145
               

               
Conread position:
               
193-421
               

               
Cow position:
               
chr4:22713530-22713305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
69, 157
               

               
Conread position:
               
193-421
               

               
Cow position:
               
chr4:23847089-23846864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
14, 49
               

               
Conread position:
               
193-433
               

               
Cow position:
               
chr4:45706007-45706250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
193-436
               

               
Cow position:
               
chr4:1646129-1645876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
193-451
               

               
Cow position:
               
chr4:28836499-28836766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
75, 100
               

               
Conread position:
               
194-363
               

               
Cow position:
               
chr4:16594048-16594218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 46
               

               
Conread position:
               
194-384
               

               
Cow position:
               
chr4:12047836-12048035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
194-384
               

               
Cow position:
               
chr4:15462289-15462093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
62, 159
               

               
Conread position:
               
194-417
               

               
Cow position:
               
chr4:19199323-19199085 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
194-417
               

               
Cow position:
               
chr4:46136714-46136946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
77, 100
               

               
Conread position:
               
194-420
               

               
Cow position:
               
chr4:19700062-19700307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
194-421
               

               
Cow position:
               
chr4:51851169-51851413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
5, 164
               

               
Conread position:
               
194-423
               

               
Cow position:
               
chr4:38157124-38156890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 168
               

               
Conread position:
               
194-435
               

               
Cow position:
               
chr4:56239896-56239647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
75, 158
               

               
Conread position:
               
194-514
               

               
Cow position:
               
chr4:22101301-22100962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
76, 111
               

               
Conread position:
               
195-340
               

               
Cow position:
               
chr4:50676205-50676060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-347
               

               
Cow position:
               
chr4:55508279-55508129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
76, 18
               

               
Conread position:
               
195-367
               

               
Cow position:
               
chr4:2602200-2602375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
73, 113
               

               
Conread position:
               
195-383
               

               
Cow position:
               
chr4:44854325-44854133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
76, 26
               

               
Conread position:
               
195-417
               

               
Cow position:
               
chr4:44184143-44183923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
74, 22
               

               
Conread position:
               
195-425
               

               
Cow position:
               
chr4:50687896-50687661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
74, 100
               

               
Conread position:
               
196-413
               

               
Cow position:
               
chr4:46456099-46455882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
197-415
               

               
Cow position:
               
chr4:27530085-27530306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 188
               

               
Conread position:
               
197-418
               

               
Cow position:
               
chr4:22010088-22009875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
197-423
               

               
Cow position:
               
chr4:8182673-8182431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
197-423
               

               
Cow position:
               
chr4:46404937-46404708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
47, 75
               

               
Conread position:
               
197-432
               

               
Cow position:
               
chr4:45738509-45738255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
198-341
               

               
Cow position:
               
chr4:45910009-45909864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 100
               

               
Conread position:
               
198-342
               

               
Cow position:
               
chr4:11496678-11496536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
73, 52
               

               
Conread position:
               
198-417
               

               
Cow position:
               
chr4:10958705-10958944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 104
               

               
Conread position:
               
198-418
               

               
Cow position:
               
chr4:37313138-37313361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
151, 14
               

               
Conread position:
               
198-422
               

               
Cow position:
               
chr4:15236604-15236825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
198-422
               

               
Cow position:
               
chr4:40995699-40995937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
198-433
               

               
Cow position:
               
chr4:13026273-13026507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 36
               

               
Conread position:
               
199-332
               

               
Cow position:
               
chr4:20881-21017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-30
               

               
Alignm gaps (pig, cow):
               
70, 100
               

               
Conread position:
               
199-413
               

               
Cow position:
               
chr4:19578359-19578576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
70, 32
               

               
Conread position:
               
201-422
               

               
Cow position:
               
chr4:45685428-45685657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
201-424
               

               
Cow position:
               
chr4:29318105-29317864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
203-383
               

               
Cow position:
               
chr4:19539264-19539077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
203-436
               

               
Cow position:
               
chr4:46560153-46560382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
204-332
               

               
Cow position:
               
chr4:19456713-19456582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
204-332
               

               
Cow position:
               
chr4:46702684-46702553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
204-384
               

               
Cow position:
               
chr4:65265332-65265154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
65, 133
               

               
Conread position:
               
205-330
               

               
Cow position:
               
chr4:64040092-64040218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
206-384
               

               
Cow position:
               
chr4:13918957-13919134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
96, 47
               

               
Conread position:
               
207-417
               

               
Cow position:
               
chr4:61608988-61608770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
62, 140
               

               
Conread position:
               
210-423
               

               
Cow position:
               
chr4:60527160-60527384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
213-417
               

               
Cow position:
               
chr4:61268174-61268375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
56, 124
               

               
Conread position:
               
214-383
               

               
Cow position:
               
chr4:53819702-53819530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
215-422
               

               
Cow position:
               
chr4:19496479-19496702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
54, 84
               

               
Conread position:
               
215-443
               

               
Cow position:
               
chr4:16814367-16814614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 212
               

               
Conread position:
               
217-422
               

               
Cow position:
               
chr4:8083812-8083606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
26, 78
               

               
Conread position:
               
217-422
               

               
Cow position:
               
chr4:19238206-19238420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 82
               

               
Conread position:
               
220-412
               

               
Cow position:
               
chr4:16070683-16070493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
21, 39
               

               
Conread position:
               
220-422
               

               
Cow position:
               
chr4:30769025-30769236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
49, 68
               

               
Conread position:
               
221-342
               

               
Cow position:
               
chr4:51708056-51708180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
221-422
               

               
Cow position:
               
chr4:17790301-17790095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 126
               

               
Conread position:
               
223-383
               

               
Cow position:
               
chr4:27511537-27511702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 92
               

               
Conread position:
               
224-422
               

               
Cow position:
               
chr4:13141100-13140907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
224-422
               

               
Cow position:
               
chr4:47231004-47230794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
224-422
               

               
Cow position:
               
chr4:47284019-47283809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
45, 70
               

               
Conread position:
               
224-437
               

               
Cow position:
               
chr4:37985726-37985950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
47, 67
               

               
Conread position:
               
225-342
               

               
Cow position:
               
chr4:65805890-65806010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
46, 74
               

               
Conread position:
               
225-421
               

               
Cow position:
               
chr4:56410340-56410545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-32
               

               
Alignm gaps (pig, cow):
               
46, 79
               

               
Conread position:
               
227-408
               

               
Cow position:
               
chr4:11506786-11506601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
42, 93
               

               
Conread position:
               
228-420
               

               
Cow position:
               
chr4:59015590-59015780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 30
               

               
Conread position:
               
228-422
               

               
Cow position:
               
chr4:22482320-22482522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
228-432
               

               
Cow position:
               
chr4:56852850-56853068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-27
               

               
Alignm gaps (pig, cow):
               
101, 9
               

               
Conread position:
               
230-421
               

               
Cow position:
               
chr4:12867105-12867301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
42, 14
               

               
Conread position:
               
232-422
               

               
Cow position:
               
chr4:30691006-30691193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 104
               

               
Conread position:
               
233-418
               

               
Cow position:
               
chr4:56805183-56805361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
233-433
               

               
Cow position:
               
chr4:22849489-22849289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 135
               

               
Conread position:
               
233-437
               

               
Cow position:
               
chr4:46656132-46656351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
38, 73
               

               
Conread position:
               
234-424
               

               
Cow position:
               
chr4:46761611-46761814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
235-417
               

               
Cow position:
               
chr4:39010054-39010250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 91
               

               
Conread position:
               
239-420
               

               
Cow position:
               
chr4:17782937-17782757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
110, 14
               

               
Conread position:
               
240-405
               

               
Cow position:
               
chr4:20912090-20912249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
32, 45
               

               
Conread position:
               
240-412
               

               
Cow position:
               
chr4:61969716-61969538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 97
               

               
Conread position:
               
241-412
               

               
Cow position:
               
chr4:479781-479610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
30, 114
               

               
Conread position:
               
241-417
               

               
Cow position:
               
chr4:25802701-25802892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 64
               

               
Conread position:
               
242-432
               

               
Cow position:
               
chr4:10410792-10410973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
243-420
               

               
Cow position:
               
chr4:45840411-45840592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 141
               

               
Conread position:
               
244-384
               

               
Cow position:
               
chr4:22051102-22050957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-21
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
246-422
               

               
Cow position:
               
chr4:57590654-57590477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
25, 46
               

               
Conread position:
               
248-417
               

               
Cow position:
               
chr4:10016610-10016438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 93
               

               
Conread position:
               
248-422
               

               
Cow position:
               
chr4:19200130-19200308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
24, 100
               

               
Conread position:
               
251-439
               

               
Cow position:
               
chr4:8871438-8871624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-24
               

               
Alignm gaps (pig, cow):
               
16, 8
               

               
Conread position:
               
268-443
               

               
Cow position:
               
chr4:22127966-22127792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               
Show alignments to all cow chromosomes.