Cow genome map

Conread name: rpigcf0_007601.y1

Conread position: 13-325
Cow position: chr1:18962678-18962372 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 164, 0

Conread position: 13-326
Cow position: chr1:3970212-3969904 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 13-339
Cow position: chr1:63045097-63044784 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 195, 0

Conread position: 13-347
Cow position: chr1:40920193-40920523 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 63

Conread position: 13-363
Cow position: chr1:27494017-27494356 (view UCSC Genome Browser custom track)
Alignm length: 357
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 20

Conread position: 13-367
Cow position: chr1:40058157-40058510 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 243

Conread position: 13-376
Cow position: chr1:29365460-29365821 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 69

Conread position: 13-377
Cow position: chr1:24594663-24595022 (view UCSC Genome Browser custom track)
Alignm length: 374
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 9

Conread position: 13-389
Cow position: chr1:21132811-21132450 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 272
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 11

Conread position: 13-390
Cow position: chr1:21677853-21678219 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 163, 114

Conread position: 13-392
Cow position: chr1:14241007-14240636 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 82

Conread position: 13-393
Cow position: chr1:21576600-21576974 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 99

Conread position: 13-395
Cow position: chr1:101524334-101523966 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 136

Conread position: 13-397
Cow position: chr1:40510204-40509822 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 88

Conread position: 13-397
Cow position: chr1:46613240-46612861 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 122

Conread position: 13-399
Cow position: chr1:90605824-90605439 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 239

Conread position: 13-401
Cow position: chr1:40681679-40681291 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-402
Cow position: chr1:19441473-19441099 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 85, 14

Conread position: 13-402
Cow position: chr1:57363280-57362892 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 161

Conread position: 13-402
Cow position: chr1:102431687-102431298 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 21, 33

Conread position: 13-403
Cow position: chr1:8828073-8828463 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 253

Conread position: 13-403
Cow position: chr1:9261564-9261938 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 116

Conread position: 13-403
Cow position: chr1:11854900-11854508 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 154, 82

Conread position: 13-403
Cow position: chr1:13438173-13438561 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 239

Conread position: 13-403
Cow position: chr1:16838369-16838759 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 13

Conread position: 13-403
Cow position: chr1:17033540-17033153 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 211

Conread position: 13-403
Cow position: chr1:24562700-24562313 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 50, 245

Conread position: 13-403
Cow position: chr1:31351714-31351327 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 238

Conread position: 13-403
Cow position: chr1:51883667-51884051 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 222

Conread position: 13-403
Cow position: chr1:55273990-55273600 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chr1:56424963-56425352 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 167

Conread position: 13-403
Cow position: chr1:56745927-56746326 (view UCSC Genome Browser custom track)
Alignm length: 405
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 251

Conread position: 13-403
Cow position: chr1:57120772-57120396 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 290, 108

Conread position: 13-403
Cow position: chr1:58418728-58419113 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 222

Conread position: 13-403
Cow position: chr1:61203437-61203826 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 138

Conread position: 13-403
Cow position: chr1:61748393-61748010 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 11

Conread position: 13-403
Cow position: chr1:65389611-65389999 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 222

Conread position: 13-403
Cow position: chr1:66972105-66971718 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 152

Conread position: 13-403
Cow position: chr1:67832084-67831694 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chr1:69671569-69671179 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 252

Conread position: 13-403
Cow position: chr1:69769871-69770260 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chr1:78921961-78921571 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 252

Conread position: 13-403
Cow position: chr1:82479037-82479425 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 57

Conread position: 13-403
Cow position: chr1:84446731-84447124 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 242

Conread position: 13-403
Cow position: chr1:85777407-85777019 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 253

Conread position: 13-403
Cow position: chr1:85807558-85807173 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 78

Conread position: 13-403
Cow position: chr1:86545085-86544696 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 212

Conread position: 13-403
Cow position: chr1:89484168-89484534 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 268
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 354, 34

Conread position: 13-403
Cow position: chr1:99572512-99572125 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 307
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 178

Conread position: 13-403
Cow position: chr1:99916492-99916881 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 33

Conread position: 13-406
Cow position: chr1:14529406-14529024 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 222, 0

Conread position: 13-406
Cow position: chr1:56141301-56140912 (view UCSC Genome Browser custom track)
Alignm length: 400
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 247

Conread position: 13-438
Cow position: chr1:30078995-30079418 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 203

Conread position: 15-325
Cow position: chr1:38478359-38478664 (view UCSC Genome Browser custom track)
Alignm length: 311
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 0

Conread position: 15-403
Cow position: chr1:21090505-21090907 (view UCSC Genome Browser custom track)
Alignm length: 409
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 9

Conread position: 16-403
Cow position: chr1:24654889-24655272 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 8, 35

Conread position: 16-403
Cow position: chr1:53519726-53520104 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 310, 8

Conread position: 16-403
Cow position: chr1:67005935-67006320 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 272
Alignm E-value: 8.40779e-45
Alignm gaps (pig, cow): 124, 96

Conread position: 21-339
Cow position: chr1:53368272-53368581 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 243
Alignm E-value: 0
Alignm gaps (pig, cow): 127, 8

Conread position: 23-397
Cow position: chr1:73762470-73762109 (view UCSC Genome Browser custom track)
Alignm length: 380
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 304, 57

Conread position: 29-402
Cow position: chr1:11289321-11288945 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 298, 230

Conread position: 30-402
Cow position: chr1:20797895-20798261 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 86

Conread position: 34-363
Cow position: chr1:31363039-31362716 (view UCSC Genome Browser custom track)
Alignm length: 330
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 0

Conread position: 38-403
Cow position: chr1:28812164-28811800 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 276
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 7

Conread position: 41-403
Cow position: chr1:68610689-68610336 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 286, 59

Conread position: 41-406
Cow position: chr1:57958477-57958111 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 289, 117

Conread position: 48-400
Cow position: chr1:18024726-18024381 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 40

Conread position: 73-403
Cow position: chr1:33854380-33854709 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 254, 27

Conread position: 76-379
Cow position: chr1:98534712-98535015 (view UCSC Genome Browser custom track)
Alignm length: 310
Alignm identity: 227
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 148

Conread position: 76-403
Cow position: chr1:31707597-31707924 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 183

Conread position: 82-402
Cow position: chr1:43449380-43449070 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 78

Conread position: 84-397
Cow position: chr1:72766913-72766602 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 240
Alignm E-value: 0
Alignm gaps (pig, cow): 243, 180

Conread position: 91-390
Cow position: chr1:22629708-22629417 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 173

Conread position: 92-403
Cow position: chr1:100888376-100888066 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 235, 130

Conread position: 95-402
Cow position: chr1:73463099-73463405 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 37, 152

Conread position: 100-403
Cow position: chr1:77389831-77389537 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 197
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 222, 108

Conread position: 102-403
Cow position: chr1:82091037-82091336 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 45

Conread position: 105-402
Cow position: chr1:55328083-55327796 (view UCSC Genome Browser custom track)
Alignm length: 303
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 219, 51

Conread position: 111-403
Cow position: chr1:22789551-22789846 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 176, 144

Conread position: 126-403
Cow position: chr1:25178858-25178583 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 206
Alignm E-value: 5.99756e-43
Alignm gaps (pig, cow): 201, 16

Conread position: 131-376
Cow position: chr1:38545547-38545301 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 187
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 82, 24

Conread position: 141-377
Cow position: chr1:33899721-33899959 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 180
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 55, 122

Conread position: 143-320
Cow position: chr1:59590959-59590788 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 79, 110

Conread position: 151-367
Cow position: chr1:81860320-81860105 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 164
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 176, 108

Conread position: 154-403
Cow position: chr1:99582264-99582014 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 191
Alignm E-value: 4e-38
Alignm gaps (pig, cow): 145, 98

Conread position: 158-401
Cow position: chr1:31646427-31646184 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 184
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 169, 101

Conread position: 159-403
Cow position: chr1:55159185-55158941 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 176
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 168, 107

Conread position: 163-403
Cow position: chr1:39235301-39235061 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 164, 96

Conread position: 166-403
Cow position: chr1:92921031-92920794 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 175
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 161, 93

Conread position: 169-367
Cow position: chr1:64942328-64942131 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 151
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 158, 97

Conread position: 171-380
Cow position: chr1:61727867-61727666 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 153
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 194, 6

Conread position: 186-406
Cow position: chr1:16117174-16116954 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 141, 73

Conread position: 193-403
Cow position: chr1:81308593-81308803 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 134, 66

Conread position: 216-395
Cow position: chr1:22389419-22389237 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 31, 45

Conread position: 217-403
Cow position: chr1:26838211-26838397 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 110, 42

Conread position: 364-580
Cow position: chr1:96558930-96558718 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 30

Conread position: 416-581
Cow position: chr1:31256255-31256094 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 416-586
Cow position: chr1:65909481-65909647 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 23, 0

Conread position: 416-586
Cow position: chr1:98594526-98594702 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 418-578
Cow position: chr1:101280764-101280609 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 21, 0

Conread position: 420-576
Cow position: chr1:30418082-30417921 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 18, 49

Conread position: 426-567
Cow position: chr1:42545801-42545661 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 12, 0

Conread position: 426-571
Cow position: chr1:83606471-83606328 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 427-580
Cow position: chr1:92602997-92603150 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 427-581
Cow position: chr1:34159814-34159967 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 87, 19

Conread position: 427-581
Cow position: chr1:49334413-49334258 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 126, 11

Conread position: 428-580
Cow position: chr1:80584409-80584560 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 123, 0

Conread position: 428-586
Cow position: chr1:64019542-64019384 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 430-568
Cow position: chr1:70538591-70538730 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 5, 0

Conread position: 430-578
Cow position: chr1:81613369-81613518 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 430-581
Cow position: chr1:11729156-11729307 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 431-568
Cow position: chr1:52039620-52039755 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 431-578
Cow position: chr1:5135727-5135580 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 130, 21

Conread position: 431-586
Cow position: chr1:53458680-53458830 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 73, 63

Conread position: 432-568
Cow position: chr1:41027058-41027193 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 52, 0

Conread position: 433-581
Cow position: chr1:49839469-49839616 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 78, 0

Conread position: 434-585
Cow position: chr1:42537338-42537186 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 114
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 65, 103

Conread position: 434-588
Cow position: chr1:25383654-25383805 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 435-584
Cow position: chr1:3882473-3882324 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 436-571
Cow position: chr1:45315649-45315514 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 436-571
Cow position: chr1:87197807-87197942 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 436-571
Cow position: chr1:93590599-93590464 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 436-571
Cow position: chr1:97938942-97939079 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 436-580
Cow position: chr1:73960690-73960831 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 436-581
Cow position: chr1:91874925-91874785 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 436-581
Cow position: chr1:95072319-95072464 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 436-586
Cow position: chr1:759431-759281 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 436-586
Cow position: chr1:47233491-47233341 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 436-588
Cow position: chr1:78857342-78857190 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 438-582
Cow position: chr1:67688593-67688450 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 0

Conread position: 440-580
Cow position: chr1:88913311-88913450 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 441-563
Cow position: chr1:61542926-61542805 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 98
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 49, 0

Conread position: 441-567
Cow position: chr1:19515627-19515501 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 441-568
Cow position: chr1:97231952-97232079 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 441-570
Cow position: chr1:65028526-65028653 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 0

Conread position: 441-571
Cow position: chr1:52435264-52435394 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 441-580
Cow position: chr1:186282-186150 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 65, 0

Conread position: 441-580
Cow position: chr1:68127198-68127058 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 130, 0

Conread position: 441-580
Cow position: chr1:81481390-81481251 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 441-581
Cow position: chr1:53520904-53521047 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 89, 11

Conread position: 441-581
Cow position: chr1:81858910-81858769 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 131

Conread position: 441-582
Cow position: chr1:22461246-22461105 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 441-582
Cow position: chr1:95974392-95974532 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 129, 0

Conread position: 441-585
Cow position: chr1:42887285-42887141 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 441-586
Cow position: chr1:10421700-10421844 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 128, 69

Conread position: 441-586
Cow position: chr1:61005570-61005426 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 70, 0

Conread position: 441-586
Cow position: chr1:73719453-73719599 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 127, 0

Conread position: 441-586
Cow position: chr1:84768886-84768742 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 441-586
Cow position: chr1:90868449-90868310 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 105, 0

Conread position: 441-586
Cow position: chr1:101866504-101866361 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 441-587
Cow position: chr1:66898506-66898359 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 441-588
Cow position: chr1:87095222-87095075 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 441-588
Cow position: chr1:98511919-98512067 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 139, 105

Conread position: 442-556
Cow position: chr1:75141990-75142104 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 93
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-559
Cow position: chr1:44506966-44507083 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-564
Cow position: chr1:24561516-24561394 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-564
Cow position: chr1:24570954-24570832 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-564
Cow position: chr1:37309526-37309404 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-564
Cow position: chr1:95215197-95215075 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-565
Cow position: chr1:5006155-5006277 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 100
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 442-566
Cow position: chr1:48769795-48769919 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-566
Cow position: chr1:74081988-74081864 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 100
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 442-566
Cow position: chr1:101632344-101632220 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-567
Cow position: chr1:72011820-72011695 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 104
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 442-568
Cow position: chr1:5637066-5636939 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 442-568
Cow position: chr1:69539684-69539810 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 79, 73

Conread position: 442-568
Cow position: chr1:83301959-83301831 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 66, 0

Conread position: 442-568
Cow position: chr1:85712433-85712558 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 101
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 107, 0

Conread position: 442-569
Cow position: chr1:7971404-7971532 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 442-569
Cow position: chr1:35162403-35162530 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-569
Cow position: chr1:45223574-45223701 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 442-570
Cow position: chr1:39068963-39068835 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chr1:22192762-22192891 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chr1:39418118-39417993 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 442-571
Cow position: chr1:43311779-43311649 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 442-571
Cow position: chr1:61011174-61011303 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 108
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chr1:63530551-63530682 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 122, 0

Conread position: 442-571
Cow position: chr1:66752636-66752507 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chr1:73721353-73721483 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 114

Conread position: 442-571
Cow position: chr1:78068076-78067948 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 112, 0

Conread position: 442-571
Cow position: chr1:82880639-82880766 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 106
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 17, 0

Conread position: 442-574
Cow position: chr1:24406904-24406772 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-574
Cow position: chr1:30504494-30504626 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-575
Cow position: chr1:8608-8741 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 69

Conread position: 442-575
Cow position: chr1:49433271-49433138 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 442-578
Cow position: chr1:242550-242686 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 442-578
Cow position: chr1:7739941-7740076 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 49, 0

Conread position: 442-578
Cow position: chr1:45478866-45478734 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 442-578
Cow position: chr1:73936152-73936015 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 110, 0

Conread position: 442-579
Cow position: chr1:25281664-25281527 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chr1:4032625-4032763 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chr1:4291159-4291295 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 0

Conread position: 442-580
Cow position: chr1:22823898-22824036 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chr1:36998179-36998316 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 13, 0

Conread position: 442-580
Cow position: chr1:56225778-56225914 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 122, 0

Conread position: 442-580
Cow position: chr1:63079003-63079138 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 109
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 59, 0

Conread position: 442-580
Cow position: chr1:69264803-69264939 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 27, 0

Conread position: 442-580
Cow position: chr1:71916126-71915989 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 112
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 442-580
Cow position: chr1:72068842-72068703 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 91, 0

Conread position: 442-580
Cow position: chr1:77739715-77739852 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 442-580
Cow position: chr1:90976095-90975956 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 122, 107

Conread position: 442-580
Cow position: chr1:100474227-100474365 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr1:8670766-8670906 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 124, 0

Conread position: 442-581
Cow position: chr1:22035604-22035743 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr1:31272449-31272311 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 120, 0

Conread position: 442-581
Cow position: chr1:36875023-36875158 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 442-581
Cow position: chr1:43312038-43311899 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr1:49980703-49980841 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 110
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 442-581
Cow position: chr1:54157287-54157428 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 115
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 0

Conread position: 442-581
Cow position: chr1:76436473-76436612 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr1:78794238-78794099 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr1:91066158-91066020 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 69, 0

Conread position: 442-581
Cow position: chr1:97144471-97144333 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 69, 52

Conread position: 442-583
Cow position: chr1:3923807-3923666 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-583
Cow position: chr1:42541591-42541731 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 129, 0

Conread position: 442-584
Cow position: chr1:56477585-56477726 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 139, 0

Conread position: 442-585
Cow position: chr1:7908030-7908173 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 71

Conread position: 442-585
Cow position: chr1:45555359-45555501 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 107, 0

Conread position: 442-585
Cow position: chr1:68676354-68676498 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 119, 17

Conread position: 442-585
Cow position: chr1:77683345-77683491 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 442-585
Cow position: chr1:99642374-99642234 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 442-586
Cow position: chr1:3815694-3815548 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 36

Conread position: 442-586
Cow position: chr1:8347116-8347260 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 64, 71

Conread position: 442-586
Cow position: chr1:19304565-19304707 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 63, 0

Conread position: 442-586
Cow position: chr1:23512666-23512524 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 442-586
Cow position: chr1:34771510-34771366 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chr1:65881800-65881942 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 442-586
Cow position: chr1:68672604-68672465 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 31, 0

Conread position: 442-586
Cow position: chr1:77880737-77880598 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 442-586
Cow position: chr1:81580171-81580314 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 57, 0

Conread position: 442-586
Cow position: chr1:88359871-88360015 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chr1:92684702-92684557 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 442-586
Cow position: chr1:96081473-96081617 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 130, 83

Conread position: 442-586
Cow position: chr1:98576040-98576184 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chr1:101177508-101177652 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 72

Conread position: 442-587
Cow position: chr1:10778556-10778701 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-587
Cow position: chr1:24534261-24534118 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 133, 52

Conread position: 442-587
Cow position: chr1:46764869-46765013 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 99

Conread position: 442-588
Cow position: chr1:53308396-53308255 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 117
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 442-588
Cow position: chr1:54156741-54156598 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 109, 56

Conread position: 442-588
Cow position: chr1:54258560-54258705 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 442-588
Cow position: chr1:55428964-55428817 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 32, 0

Conread position: 442-588
Cow position: chr1:65318568-65318713 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 107, 0

Conread position: 442-588
Cow position: chr1:67529048-67529194 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 442-588
Cow position: chr1:85550085-85549941 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 123, 0

Conread position: 442-588
Cow position: chr1:93554829-93554975 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 27, 31

Conread position: 442-588
Cow position: chr1:94226561-94226416 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 442-588
Cow position: chr1:95835805-95835659 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 66, 76

Conread position: 442-588
Cow position: chr1:97696740-97696884 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 139, 52

Conread position: 442-588
Cow position: chr1:101268008-101267865 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 17, 0

Conread position: 443-560
Cow position: chr1:64572509-64572626 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 443-569
Cow position: chr1:6972520-6972646 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 443-569
Cow position: chr1:95516033-95516159 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 443-571
Cow position: chr1:21954227-21954102 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 443-571
Cow position: chr1:95176933-95177059 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 443-578
Cow position: chr1:86578959-86579091 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 31, 16

Conread position: 443-580
Cow position: chr1:101525931-101525794 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 443-581
Cow position: chr1:69445323-69445464 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 63, 0

Conread position: 443-581
Cow position: chr1:69481954-69481818 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 443-581
Cow position: chr1:93528693-93528833 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 65, 29

Conread position: 443-586
Cow position: chr1:28563572-28563433 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 0

Conread position: 443-588
Cow position: chr1:1956339-1956196 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 109
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 443-588
Cow position: chr1:43872325-43872181 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 69, 0

Conread position: 444-565
Cow position: chr1:66430288-66430407 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 98
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 27, 0

Conread position: 444-571
Cow position: chr1:6381767-6381893 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 103
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 444-578
Cow position: chr1:15333890-15334020 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 106
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 41, 0

Conread position: 444-579
Cow position: chr1:101507355-101507489 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 102, 0

Conread position: 444-580
Cow position: chr1:80336254-80336117 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 444-581
Cow position: chr1:20667747-20667611 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 444-581
Cow position: chr1:73551515-73551377 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 131

Conread position: 444-585
Cow position: chr1:96273027-96272890 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 107
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 444-586
Cow position: chr1:500170-500312 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 444-588
Cow position: chr1:56711604-56711464 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 13, 0

Conread position: 444-588
Cow position: chr1:72813612-72813755 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 444-588
Cow position: chr1:79844460-79844604 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 445-570
Cow position: chr1:72422412-72422288 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 446-568
Cow position: chr1:31357512-31357391 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 87, 0

Conread position: 446-574
Cow position: chr1:3352701-3352575 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 25, 0

Conread position: 446-581
Cow position: chr1:80422273-80422404 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 447-581
Cow position: chr1:6731178-6731312 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 450-581
Cow position: chr1:19997971-19997843 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 450-581
Cow position: chr1:32014199-32014328 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 105
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 453-562
Cow position: chr1:6989154-6989263 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 454-571
Cow position: chr1:31630282-31630165 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 455-571
Cow position: chr1:64706499-64706614 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 456-579
Cow position: chr1:45874061-45873940 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 457-580
Cow position: chr1:25022067-25021944 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 458-571
Cow position: chr1:84288412-84288525 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 460-571
Cow position: chr1:52370160-52370050 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 460-571
Cow position: chr1:81638559-81638670 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 92
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 460-580
Cow position: chr1:45673765-45673885 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 460-586
Cow position: chr1:98557108-98556982 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 460-588
Cow position: chr1:46100829-46100701 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 461-586
Cow position: chr1:3417367-3417492 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 461-587
Cow position: chr1:42822283-42822410 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 116, 0

Conread position: 464-571
Cow position: chr1:45283209-45283315 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 91
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 98, 0

Conread position: 464-572
Cow position: chr1:32787939-32787831 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 64, 32

Conread position: 464-578
Cow position: chr1:78697757-78697643 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 464-580
Cow position: chr1:39684129-39684015 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 464-581
Cow position: chr1:43148530-43148413 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 464-585
Cow position: chr1:55194231-55194111 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 100
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 98, 0

Conread position: 464-586
Cow position: chr1:63460893-63461014 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 466-580
Cow position: chr1:23055064-23055178 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 466-586
Cow position: chr1:70416743-70416624 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 107, 0

Conread position: 466-586
Cow position: chr1:99024214-99024094 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 468-571
Cow position: chr1:28985546-28985444 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 85
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 471-575
Cow position: chr1:52506150-52506046 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 86
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 472-585
Cow position: chr1:64457988-64458101 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 7e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 472-586
Cow position: chr1:34318763-34318649 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 475-568
Cow position: chr1:61513294-61513202 (view UCSC Genome Browser custom track)
Alignm length: 94
Alignm identity: 80
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 475-581
Cow position: chr1:1875412-1875519 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 0

Conread position: 476-581
Cow position: chr1:76080834-76080937 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 88
Alignm E-value: 6e-22
Alignm gaps (pig, cow): 32, 0

Conread position: 476-585
Cow position: chr1:53540601-53540710 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 476-586
Cow position: chr1:70291814-70291923 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 491-581
Cow position: chr1:98402611-98402701 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.