Cow genome map

Conread name: rpigcf0_007601.y1

Conread position: 13-325
Cow position: chr11:29616580-29616286 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 233
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 0

Conread position: 13-396
Cow position: chr11:35142616-35142234 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 201, 21

Conread position: 13-397
Cow position: chr11:80789678-80789291 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 248

Conread position: 13-401
Cow position: chr11:26122205-26121817 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 214, 185

Conread position: 13-401
Cow position: chr11:32078064-32077680 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 51

Conread position: 13-402
Cow position: chr11:11990713-11991103 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 161

Conread position: 13-403
Cow position: chr11:5273858-5273469 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 32

Conread position: 13-403
Cow position: chr11:5482730-5482341 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 33

Conread position: 13-403
Cow position: chr11:6343176-6343564 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 67

Conread position: 13-403
Cow position: chr11:7121248-7120858 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chr11:7719800-7719410 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chr11:10958546-10958934 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 63

Conread position: 13-403
Cow position: chr11:15495105-15495493 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 39

Conread position: 13-403
Cow position: chr11:20731507-20731117 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chr11:27725186-27724796 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chr11:27922508-27922901 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 248

Conread position: 13-403
Cow position: chr11:28227064-28226673 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 247

Conread position: 13-403
Cow position: chr11:29663334-29662949 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 122

Conread position: 13-403
Cow position: chr11:38832763-38832374 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 223

Conread position: 13-403
Cow position: chr11:44106391-44106787 (view UCSC Genome Browser custom track)
Alignm length: 406
Alignm identity: 298
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 231

Conread position: 13-403
Cow position: chr11:49171783-49171388 (view UCSC Genome Browser custom track)
Alignm length: 401
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 305, 246

Conread position: 13-403
Cow position: chr11:52846192-52846580 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 87

Conread position: 13-403
Cow position: chr11:56463077-56463467 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 238

Conread position: 13-403
Cow position: chr11:63390764-63390377 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 239

Conread position: 13-403
Cow position: chr11:63860928-63860539 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 252

Conread position: 13-403
Cow position: chr11:67920617-67920237 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 152

Conread position: 13-403
Cow position: chr11:71332217-71332607 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 229, 16

Conread position: 13-403
Cow position: chr11:75402792-75402405 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 260, 201

Conread position: 13-403
Cow position: chr11:84966829-84967213 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 162

Conread position: 13-438
Cow position: chr11:35738627-35738204 (view UCSC Genome Browser custom track)
Alignm length: 432
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 253

Conread position: 14-367
Cow position: chr11:39600146-39599783 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 241, 279

Conread position: 14-403
Cow position: chr11:4024633-4024250 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 192, 200

Conread position: 14-403
Cow position: chr11:9388052-9388442 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 66, 95

Conread position: 14-403
Cow position: chr11:35542351-35541965 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 10

Conread position: 15-401
Cow position: chr11:38599996-38599611 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 10

Conread position: 15-403
Cow position: chr11:3795957-3796336 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 9

Conread position: 15-403
Cow position: chr11:17980574-17980189 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 284
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 112

Conread position: 15-403
Cow position: chr11:58050207-58049822 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 9

Conread position: 15-403
Cow position: chr11:83284613-83284986 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 350, 29

Conread position: 16-403
Cow position: chr11:34297220-34297588 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 188, 45

Conread position: 21-387
Cow position: chr11:44915963-44915592 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 152, 61

Conread position: 28-392
Cow position: chr11:9154166-9153808 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 339, 161

Conread position: 40-377
Cow position: chr11:52127951-52128288 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 287, 219

Conread position: 41-403
Cow position: chr11:73137334-73137696 (view UCSC Genome Browser custom track)
Alignm length: 368
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 219

Conread position: 47-403
Cow position: chr11:63652926-63652572 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 262
Alignm E-value: 0
Alignm gaps (pig, cow): 280, 205

Conread position: 72-397
Cow position: chr11:17782253-17781931 (view UCSC Genome Browser custom track)
Alignm length: 329
Alignm identity: 247
Alignm E-value: 0
Alignm gaps (pig, cow): 248, 187

Conread position: 72-403
Cow position: chr11:3238075-3238407 (view UCSC Genome Browser custom track)
Alignm length: 338
Alignm identity: 253
Alignm E-value: 0
Alignm gaps (pig, cow): 255, 187

Conread position: 77-403
Cow position: chr11:63478630-63478956 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 250, 181

Conread position: 90-403
Cow position: chr11:4675823-4675528 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 272, 147

Conread position: 103-325
Cow position: chr11:65852352-65852135 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 170
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 67, 0

Conread position: 105-403
Cow position: chr11:46781261-46780965 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 221, 96

Conread position: 119-403
Cow position: chr11:7229181-7229465 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 208, 147

Conread position: 119-403
Cow position: chr11:87155177-87154905 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 208
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 87, 51

Conread position: 121-403
Cow position: chr11:66390184-66389906 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 206, 138

Conread position: 133-403
Cow position: chr11:15988123-15988393 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 200
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 194, 124

Conread position: 151-397
Cow position: chr11:56652386-56652144 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 188
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 169, 101

Conread position: 153-389
Cow position: chr11:38069151-38069385 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 163
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 172, 17

Conread position: 171-403
Cow position: chr11:21853378-21853146 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 156, 88

Conread position: 218-401
Cow position: chr11:47758068-47757885 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 109, 40

Conread position: 376-580
Cow position: chr11:69307419-69307621 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 67, 21

Conread position: 416-586
Cow position: chr11:60470247-60470085 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 33, 0

Conread position: 416-588
Cow position: chr11:18509087-18508915 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 426-585
Cow position: chr11:84775025-84775186 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 129
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 14, 125

Conread position: 427-581
Cow position: chr11:39060646-39060494 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 9, 0

Conread position: 428-588
Cow position: chr11:26845639-26845479 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 9, 131

Conread position: 428-588
Cow position: chr11:37804597-37804438 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 429-569
Cow position: chr11:18587638-18587499 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 0

Conread position: 429-578
Cow position: chr11:23407422-23407570 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 429-581
Cow position: chr11:63920096-63919945 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 116
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 429-586
Cow position: chr11:16907091-16906937 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 9, 0

Conread position: 429-586
Cow position: chr11:34963027-34963183 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 430-586
Cow position: chr11:17721845-17721689 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 141

Conread position: 430-588
Cow position: chr11:34136204-34136356 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 128, 16

Conread position: 431-564
Cow position: chr11:33527010-33527144 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 431-581
Cow position: chr11:34646548-34646698 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 431-581
Cow position: chr11:62812991-62812841 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 431-582
Cow position: chr11:62620335-62620486 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 109
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 431-588
Cow position: chr11:62168371-62168216 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 432-584
Cow position: chr11:897633-897786 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 136, 0

Conread position: 432-586
Cow position: chr11:54334288-54334442 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 118
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 433-586
Cow position: chr11:15382542-15382389 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 434-569
Cow position: chr11:69119255-69119390 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 102
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 434-571
Cow position: chr11:42296658-42296521 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 101
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 434-583
Cow position: chr11:41140-41290 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 74, 34

Conread position: 434-586
Cow position: chr11:19606539-19606692 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 138, 0

Conread position: 434-586
Cow position: chr11:48272162-48272314 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 434-588
Cow position: chr11:28644049-28644203 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 436-580
Cow position: chr11:30830650-30830506 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 436-586
Cow position: chr11:41293854-41293704 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 436-587
Cow position: chr11:20205888-20205737 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 437-586
Cow position: chr11:35536552-35536700 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 441-566
Cow position: chr11:36112392-36112513 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 44, 0

Conread position: 441-568
Cow position: chr11:29659528-29659655 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 441-568
Cow position: chr11:70206290-70206414 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 441-570
Cow position: chr11:34113233-34113363 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 43, 0

Conread position: 441-570
Cow position: chr11:46747892-46747763 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 441-571
Cow position: chr11:3739922-3740052 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 441-571
Cow position: chr11:4199240-4199369 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 100
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 55, 0

Conread position: 441-580
Cow position: chr11:32436304-32436442 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 122, 8

Conread position: 441-581
Cow position: chr11:33697611-33697745 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 0

Conread position: 441-586
Cow position: chr11:34692822-34692967 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 441-586
Cow position: chr11:53717838-53717694 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 441-586
Cow position: chr11:63917508-63917363 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 84

Conread position: 441-588
Cow position: chr11:58173594-58173740 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 58, 0

Conread position: 441-588
Cow position: chr11:71868634-71868487 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-554
Cow position: chr11:52983645-52983757 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-559
Cow position: chr11:27565303-27565417 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 48, 0

Conread position: 442-562
Cow position: chr11:49934761-49934641 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 93
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-566
Cow position: chr11:18698849-18698973 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-567
Cow position: chr11:21852332-21852207 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-568
Cow position: chr11:9270755-9270631 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 103
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 41, 0

Conread position: 442-568
Cow position: chr11:16320256-16320379 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 99
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 442-569
Cow position: chr11:23232546-23232423 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 43, 73

Conread position: 442-570
Cow position: chr11:41986076-41985948 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 104
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chr11:3234045-3234174 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chr11:8988260-8988133 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 111
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 68, 0

Conread position: 442-571
Cow position: chr11:15373808-15373938 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 103

Conread position: 442-571
Cow position: chr11:17278702-17278577 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 442-571
Cow position: chr11:17321617-17321748 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 63

Conread position: 442-571
Cow position: chr11:30638980-30638851 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chr11:71492890-71492763 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 29, 0

Conread position: 442-571
Cow position: chr11:83230430-83230302 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 98
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 442-572
Cow position: chr11:20602197-20602326 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 107
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 442-578
Cow position: chr11:49152919-49153054 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 54, 0

Conread position: 442-578
Cow position: chr11:63909694-63909561 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 52, 0

Conread position: 442-579
Cow position: chr11:48474673-48474810 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-579
Cow position: chr11:71110861-71110998 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chr11:4653003-4652865 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chr11:13499987-13500124 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 125, 17

Conread position: 442-580
Cow position: chr11:29946944-29946807 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 131, 0

Conread position: 442-580
Cow position: chr11:35669982-35669845 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 113
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 87, 0

Conread position: 442-580
Cow position: chr11:39462593-39462731 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chr11:46427438-46427298 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 112, 0

Conread position: 442-580
Cow position: chr11:51729256-51729394 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chr11:52690550-52690414 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 53, 0

Conread position: 442-580
Cow position: chr11:63435491-63435628 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 115
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 69, 48

Conread position: 442-580
Cow position: chr11:71807599-71807459 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 64, 18

Conread position: 442-581
Cow position: chr11:6233910-6233771 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr11:13043176-13043037 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr11:23586608-23586747 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr11:33310944-33311086 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 66, 7

Conread position: 442-581
Cow position: chr11:41313687-41313548 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 102
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr11:58938775-58938636 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr11:61958774-61958636 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 442-581
Cow position: chr11:63382221-63382082 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chr11:71501162-71501025 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 116, 0

Conread position: 442-581
Cow position: chr11:73354090-73353950 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 0

Conread position: 442-582
Cow position: chr11:82107924-82107792 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 28, 0

Conread position: 442-583
Cow position: chr11:47837290-47837430 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 442-583
Cow position: chr11:69415627-69415488 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 45, 0

Conread position: 442-583
Cow position: chr11:84977389-84977248 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 129

Conread position: 442-584
Cow position: chr11:53778586-53778728 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 442-585
Cow position: chr11:46952917-46953060 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 107
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-585
Cow position: chr11:71341495-71341352 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 104
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-585
Cow position: chr11:82731028-82730885 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chr11:6633680-6633824 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chr11:17831251-17831107 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 130, 35

Conread position: 442-586
Cow position: chr11:29786529-29786383 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 122, 0

Conread position: 442-586
Cow position: chr11:56290481-56290625 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chr11:70825918-70826062 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chr11:72375713-72375562 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 80, 0

Conread position: 442-587
Cow position: chr11:26144126-26143981 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-588
Cow position: chr11:35109568-35109423 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 69, 41

Conread position: 442-588
Cow position: chr11:62155608-62155752 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 74, 66

Conread position: 442-588
Cow position: chr11:69417373-69417517 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 45, 0

Conread position: 443-568
Cow position: chr11:377671-377546 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 443-571
Cow position: chr11:8147928-8147800 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 443-571
Cow position: chr11:58588317-58588443 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 443-576
Cow position: chr11:1362497-1362364 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 103
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 443-579
Cow position: chr11:44636783-44636648 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 119, 0

Conread position: 443-581
Cow position: chr11:79019088-79018950 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 443-583
Cow position: chr11:44016945-44017085 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 443-585
Cow position: chr11:62609575-62609717 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 113
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 443-586
Cow position: chr11:23138083-23137939 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 115
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 98, 30

Conread position: 443-586
Cow position: chr11:61454543-61454403 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 136, 28

Conread position: 444-564
Cow position: chr11:36986921-36987041 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 95
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 444-567
Cow position: chr11:84890745-84890623 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 444-568
Cow position: chr11:73512471-73512348 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 99
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 114, 0

Conread position: 444-571
Cow position: chr11:43914263-43914390 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 444-580
Cow position: chr11:4207283-4207418 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 128, 104

Conread position: 444-581
Cow position: chr11:67312752-67312889 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 109
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 444-583
Cow position: chr11:17227670-17227534 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 43, 0

Conread position: 444-588
Cow position: chr11:2084115-2084259 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 444-588
Cow position: chr11:64868049-64867904 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 29, 24

Conread position: 446-565
Cow position: chr11:33348213-33348095 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 98
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 446-581
Cow position: chr11:70978760-70978625 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 123, 99

Conread position: 449-565
Cow position: chr11:61130690-61130574 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 449-570
Cow position: chr11:68173508-68173629 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 93
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 449-579
Cow position: chr11:78820128-78820256 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 50, 0

Conread position: 449-581
Cow position: chr11:40478876-40478744 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 105
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 449-586
Cow position: chr11:35363458-35363596 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 123, 0

Conread position: 449-586
Cow position: chr11:79466188-79466328 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 450-571
Cow position: chr11:22977896-22977776 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 0

Conread position: 451-567
Cow position: chr11:32782905-32782789 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 91
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 451-579
Cow position: chr11:80586252-80586381 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 105
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 452-573
Cow position: chr11:15683000-15682879 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 102
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 452-588
Cow position: chr11:76606652-76606788 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 453-573
Cow position: chr11:70086315-70086433 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 453-580
Cow position: chr11:31227943-31228070 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 453-582
Cow position: chr11:81728667-81728539 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 453-586
Cow position: chr11:85186547-85186413 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 127, 0

Conread position: 454-588
Cow position: chr11:66099881-66099747 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 455-581
Cow position: chr11:74378857-74378986 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 41, 58

Conread position: 455-585
Cow position: chr11:68918291-68918416 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 456-570
Cow position: chr11:42056089-42056204 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 95
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 56

Conread position: 458-581
Cow position: chr11:70639831-70639953 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 104, 0

Conread position: 460-569
Cow position: chr11:62808518-62808410 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 88
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 460-581
Cow position: chr11:26535777-26535895 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 101
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 78, 8

Conread position: 460-583
Cow position: chr11:65843086-65842964 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 460-586
Cow position: chr11:74720712-74720839 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 97
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 112, 0

Conread position: 460-588
Cow position: chr11:41576880-41576757 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 460-588
Cow position: chr11:41983179-41983052 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 460-588
Cow position: chr11:62778430-62778557 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 18, 0

Conread position: 461-571
Cow position: chr11:30320791-30320904 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 91
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 464-575
Cow position: chr11:46452127-46452238 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 464-586
Cow position: chr11:1071099-1070977 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 94
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 465-571
Cow position: chr11:25320178-25320284 (view UCSC Genome Browser custom track)
Alignm length: 107
Alignm identity: 86
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 466-588
Cow position: chr11:59916140-59916263 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 98
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 14, 6

Conread position: 468-571
Cow position: chr11:60720460-60720357 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 84
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 471-580
Cow position: chr11:61178356-61178465 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 87
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 471-581
Cow position: chr11:35860581-35860689 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 90
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 25, 0

Conread position: 471-586
Cow position: chr11:4436746-4436861 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 96
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 472-571
Cow position: chr11:29482436-29482337 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 88
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 47

Conread position: 473-586
Cow position: chr11:56895974-56895862 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 69, 0

Show alignments to all cow chromosomes.