Cow genome map
Conread name: | rpigcf0_007601.y1 |
Conread position: | 11-395 |
Cow position: | chr26:26238044-26238425 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 292 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 316, 241 |
Conread position: | 13-323 |
Cow position: | chr26:11262787-11263084 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 296, 223 |
Conread position: | 13-325 |
Cow position: | chr26:2349127-2348820 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 236 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 243, 0 |
Conread position: | 13-325 |
Cow position: | chr26:21535406-21535714 (view UCSC Genome Browser custom track) |
Alignm length: | 313 |
Alignm identity: | 240 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 235, 0 |
Conread position: | 13-379 |
Cow position: | chr26:22660232-22659883 (view UCSC Genome Browser custom track) |
Alignm length: | 370 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 76, 220 |
Conread position: | 13-397 |
Cow position: | chr26:13806982-13806599 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 282 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 100 |
Conread position: | 13-403 |
Cow position: | chr26:1885050-1885444 (view UCSC Genome Browser custom track) |
Alignm length: | 404 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 36, 150 |
Conread position: | 13-403 |
Cow position: | chr26:5679574-5679966 (view UCSC Genome Browser custom track) |
Alignm length: | 398 |
Alignm identity: | 289 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 253 |
Conread position: | 13-403 |
Cow position: | chr26:9100934-9100560 (view UCSC Genome Browser custom track) |
Alignm length: | 392 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 354, 102 |
Conread position: | 13-403 |
Cow position: | chr26:12585494-12585104 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 246 |
Conread position: | 13-403 |
Cow position: | chr26:17429431-17429041 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 253 |
Conread position: | 13-403 |
Cow position: | chr26:23889454-23889844 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 288 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 55, 248 |
Conread position: | 13-403 |
Cow position: | chr26:30625567-30625180 (view UCSC Genome Browser custom track) |
Alignm length: | 397 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 139, 9 |
Conread position: | 13-403 |
Cow position: | chr26:35191503-35191114 (view UCSC Genome Browser custom track) |
Alignm length: | 396 |
Alignm identity: | 287 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 314, 209 |
Conread position: | 13-403 |
Cow position: | chr26:35394031-35393663 (view UCSC Genome Browser custom track) |
Alignm length: | 395 |
Alignm identity: | 265 |
Alignm E-value: | 3e-36 |
Alignm gaps (pig, cow): | 314, 41 |
Conread position: | 15-322 |
Cow position: | chr26:4753099-4753396 (view UCSC Genome Browser custom track) |
Alignm length: | 308 |
Alignm identity: | 230 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 15-325 |
Cow position: | chr26:7506667-7506362 (view UCSC Genome Browser custom track) |
Alignm length: | 312 |
Alignm identity: | 241 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 213, 178 |
Conread position: | 38-403 |
Cow position: | chr26:1915412-1915774 (view UCSC Genome Browser custom track) |
Alignm length: | 371 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 289, 7 |
Conread position: | 48-403 |
Cow position: | chr26:46572-46217 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 266 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 211 |
Conread position: | 89-403 |
Cow position: | chr26:6844100-6843786 (view UCSC Genome Browser custom track) |
Alignm length: | 320 |
Alignm identity: | 235 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 237, 177 |
Conread position: | 98-403 |
Cow position: | chr26:386809-387114 (view UCSC Genome Browser custom track) |
Alignm length: | 311 |
Alignm identity: | 239 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 229, 161 |
Conread position: | 163-324 |
Cow position: | chr26:756416-756263 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 123 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 66, 0 |
Conread position: | 165-403 |
Cow position: | chr26:799877-800112 (view UCSC Genome Browser custom track) |
Alignm length: | 244 |
Alignm identity: | 167 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 162, 70 |
Conread position: | 166-341 |
Cow position: | chr26:7459767-7459593 (view UCSC Genome Browser custom track) |
Alignm length: | 180 |
Alignm identity: | 135 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 152, 93 |
Conread position: | 194-403 |
Cow position: | chr26:18877032-18877240 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 158 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 133, 54 |
Conread position: | 213-403 |
Cow position: | chr26:29433476-29433666 (view UCSC Genome Browser custom track) |
Alignm length: | 196 |
Alignm identity: | 137 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 114, 46 |
Conread position: | 413-580 |
Cow position: | chr26:4854520-4854686 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 119 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 9, 37 |
Conread position: | 417-567 |
Cow position: | chr26:7224361-7224212 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 115 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 94, 6 |
Conread position: | 429-588 |
Cow position: | chr26:677988-677830 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 114 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 430-579 |
Cow position: | chr26:5168389-5168534 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 112 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 13, 56 |
Conread position: | 430-586 |
Cow position: | chr26:20291700-20291544 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 112 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 434-560 |
Cow position: | chr26:5836824-5836698 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 98 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 434-580 |
Cow position: | chr26:22892449-22892303 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 106 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 436-569 |
Cow position: | chr26:12940398-12940531 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 101 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 436-586 |
Cow position: | chr26:14175280-14175429 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 110 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 436-588 |
Cow position: | chr26:32563346-32563495 (view UCSC Genome Browser custom track) |
Alignm length: | 154 |
Alignm identity: | 114 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 11, 89 |
Conread position: | 441-567 |
Cow position: | chr26:13818425-13818552 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 9e-25 |
Alignm gaps (pig, cow): | 65, 110 |
Conread position: | 441-571 |
Cow position: | chr26:28374440-28374310 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 103 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 441-579 |
Cow position: | chr26:33202067-33201929 (view UCSC Genome Browser custom track) |
Alignm length: | 139 |
Alignm identity: | 102 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 441-581 |
Cow position: | chr26:6714297-6714157 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 116 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 131, 17 |
Conread position: | 441-585 |
Cow position: | chr26:12145115-12144971 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 104 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 441-587 |
Cow position: | chr26:7315104-7314959 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 110 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 85, 37 |
Conread position: | 441-588 |
Cow position: | chr26:19774296-19774146 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 118 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 127, 0 |
Conread position: | 442-565 |
Cow position: | chr26:1325761-1325884 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-565 |
Cow position: | chr26:18876958-18876835 (view UCSC Genome Browser custom track) |
Alignm length: | 124 |
Alignm identity: | 96 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-567 |
Cow position: | chr26:10965590-10965464 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 102 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 442-571 |
Cow position: | chr26:6794149-6794283 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 103 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 98, 0 |
Conread position: | 442-571 |
Cow position: | chr26:12893423-12893295 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 99 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 442-571 |
Cow position: | chr26:17057682-17057812 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 98 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 442-571 |
Cow position: | chr26:29664155-29664024 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 442-571 |
Cow position: | chr26:33011664-33011537 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 99 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 62, 0 |
Conread position: | 442-579 |
Cow position: | chr26:22152231-22152368 (view UCSC Genome Browser custom track) |
Alignm length: | 138 |
Alignm identity: | 104 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-581 |
Cow position: | chr26:9104277-9104139 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 103 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 122, 0 |
Conread position: | 442-581 |
Cow position: | chr26:16921942-16922081 (view UCSC Genome Browser custom track) |
Alignm length: | 141 |
Alignm identity: | 106 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 122, 63 |
Conread position: | 442-581 |
Cow position: | chr26:30254629-30254491 (view UCSC Genome Browser custom track) |
Alignm length: | 140 |
Alignm identity: | 107 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 57, 0 |
Conread position: | 442-583 |
Cow position: | chr26:25074721-25074861 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 114 |
Alignm E-value: | 5e-31 |
Alignm gaps (pig, cow): | 129, 0 |
Conread position: | 442-585 |
Cow position: | chr26:22354417-22354561 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 112 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 95, 0 |
Conread position: | 442-585 |
Cow position: | chr26:24453903-24453762 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 113 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 131, 52 |
Conread position: | 442-586 |
Cow position: | chr26:8352973-8353117 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-586 |
Cow position: | chr26:11263645-11263787 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 109 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 122, 16 |
Conread position: | 442-586 |
Cow position: | chr26:16594495-16594354 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 107 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 61, 0 |
Conread position: | 442-586 |
Cow position: | chr26:32834573-32834431 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 110 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 442-586 |
Cow position: | chr26:33253312-33253168 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 111 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-587 |
Cow position: | chr26:32571297-32571442 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 108 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-588 |
Cow position: | chr26:17398580-17398726 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 106 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 442-588 |
Cow position: | chr26:19671482-19671624 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 115 |
Alignm E-value: | 4e-27 |
Alignm gaps (pig, cow): | 63, 0 |
Conread position: | 442-588 |
Cow position: | chr26:24240684-24240829 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 106 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 48, 0 |
Conread position: | 442-588 |
Cow position: | chr26:26294188-26294046 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 111 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 443-570 |
Cow position: | chr26:6865029-6865156 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 103 |
Alignm E-value: | 4e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 443-571 |
Cow position: | chr26:178237-178367 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 100 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 444-570 |
Cow position: | chr26:32836245-32836371 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 97 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 444-579 |
Cow position: | chr26:33392400-33392535 (view UCSC Genome Browser custom track) |
Alignm length: | 136 |
Alignm identity: | 104 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 444-580 |
Cow position: | chr26:16796200-16796068 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 107 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 446-580 |
Cow position: | chr26:16435648-16435514 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 107 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 446-586 |
Cow position: | chr26:18137278-18137418 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 109 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 101, 26 |
Conread position: | 446-588 |
Cow position: | chr26:31633736-31633878 (view UCSC Genome Browser custom track) |
Alignm length: | 143 |
Alignm identity: | 105 |
Alignm E-value: | 7e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 449-573 |
Cow position: | chr26:32601361-32601486 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 117, 0 |
Conread position: | 449-574 |
Cow position: | chr26:33567031-33566908 (view UCSC Genome Browser custom track) |
Alignm length: | 126 |
Alignm identity: | 99 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 449-578 |
Cow position: | chr26:32403172-32403300 (view UCSC Genome Browser custom track) |
Alignm length: | 130 |
Alignm identity: | 98 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 85, 0 |
Conread position: | 449-579 |
Cow position: | chr26:35449074-35449204 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 98 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 450-580 |
Cow position: | chr26:5406991-5407121 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 102 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 450-581 |
Cow position: | chr26:34060345-34060476 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 451-567 |
Cow position: | chr26:32353707-32353591 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 93 |
Alignm E-value: | 8e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 451-571 |
Cow position: | chr26:829818-829938 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 455-586 |
Cow position: | chr26:6823176-6823305 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 104 |
Alignm E-value: | 3e-25 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 457-586 |
Cow position: | chr26:7153887-7154016 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 99 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 15, 78 |
Conread position: | 460-586 |
Cow position: | chr26:15599504-15599379 (view UCSC Genome Browser custom track) |
Alignm length: | 127 |
Alignm identity: | 96 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 461-581 |
Cow position: | chr26:19183224-19183106 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 98 |
Alignm E-value: | 6e-21 |
Alignm gaps (pig, cow): | 18, 48 |
Conread position: | 477-584 |
Cow position: | chr26:26245131-26245024 (view UCSC Genome Browser custom track) |
Alignm length: | 109 |
Alignm identity: | 89 |
Alignm E-value: | 6e-22 |
Alignm gaps (pig, cow): | 100, 56 |
Show alignments to all cow chromosomes.