Cow genome map

Conread name: rpigcf0_007601.y1

Conread position: 12-403
Cow position: chrX:22810706-22811091 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 196, 22

Conread position: 13-325
Cow position: chrX:8435387-8435084 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 237
Alignm E-value: 0
Alignm gaps (pig, cow): 157, 0

Conread position: 13-325
Cow position: chrX:17054379-17054686 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 236
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 13-325
Cow position: chrX:29170970-29170663 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 13-326
Cow position: chrX:24412838-24413146 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 246, 0

Conread position: 13-334
Cow position: chrX:37487758-37488079 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 256
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 250

Conread position: 13-364
Cow position: chrX:16854554-16854204 (view UCSC Genome Browser custom track)
Alignm length: 356
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 245

Conread position: 13-367
Cow position: chrX:2479817-2479464 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 253

Conread position: 13-369
Cow position: chrX:9228090-9227735 (view UCSC Genome Browser custom track)
Alignm length: 364
Alignm identity: 278
Alignm E-value: 0
Alignm gaps (pig, cow): 209, 43

Conread position: 13-374
Cow position: chrX:22869630-22869990 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 246

Conread position: 13-377
Cow position: chrX:9095454-9095818 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 275
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 58

Conread position: 13-377
Cow position: chrX:12997099-12996735 (view UCSC Genome Browser custom track)
Alignm length: 370
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 252

Conread position: 13-382
Cow position: chrX:32145445-32145075 (view UCSC Genome Browser custom track)
Alignm length: 376
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 254

Conread position: 13-397
Cow position: chrX:40070789-40070416 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 57

Conread position: 13-400
Cow position: chrX:24588923-24588538 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 253

Conread position: 13-401
Cow position: chrX:16525602-16525989 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 114, 107

Conread position: 13-402
Cow position: chrX:27615624-27616012 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 134, 240

Conread position: 13-402
Cow position: chrX:28753525-28753136 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 240

Conread position: 13-402
Cow position: chrX:36691659-36692030 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 14

Conread position: 13-402
Cow position: chrX:38231456-38231067 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:672180-671792 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 128

Conread position: 13-403
Cow position: chrX:2579232-2579620 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 99

Conread position: 13-403
Cow position: chrX:3082322-3081930 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 178

Conread position: 13-403
Cow position: chrX:5320902-5320516 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 109

Conread position: 13-403
Cow position: chrX:5354489-5354102 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 207

Conread position: 13-403
Cow position: chrX:6870751-6870363 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 27, 34

Conread position: 13-403
Cow position: chrX:7572202-7572592 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 253

Conread position: 13-403
Cow position: chrX:7754717-7755106 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 243

Conread position: 13-403
Cow position: chrX:8482259-8482648 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 209

Conread position: 13-403
Cow position: chrX:9169794-9169413 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:9642617-9642231 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 75

Conread position: 13-403
Cow position: chrX:10528973-10528585 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 317, 230

Conread position: 13-403
Cow position: chrX:13406475-13406085 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 281
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 253

Conread position: 13-403
Cow position: chrX:15260804-15260418 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 195

Conread position: 13-403
Cow position: chrX:15621720-15621331 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:16278467-16278853 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 354, 246

Conread position: 13-403
Cow position: chrX:16360196-16359806 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 244

Conread position: 13-403
Cow position: chrX:16804055-16803666 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 152

Conread position: 13-403
Cow position: chrX:16809002-16808613 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 152

Conread position: 13-403
Cow position: chrX:18193501-18193891 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 253

Conread position: 13-403
Cow position: chrX:18488903-18488513 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:21582253-21582644 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 254

Conread position: 13-403
Cow position: chrX:21592104-21592492 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 239

Conread position: 13-403
Cow position: chrX:21793401-21793791 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:22492846-22493232 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 59

Conread position: 13-403
Cow position: chrX:22539223-22538832 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 292
Alignm E-value: 0
Alignm gaps (pig, cow): 161, 253

Conread position: 13-403
Cow position: chrX:23342180-23341790 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 300
Alignm E-value: 0
Alignm gaps (pig, cow): 307, 246

Conread position: 13-403
Cow position: chrX:23573006-23572615 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 297
Alignm E-value: 0
Alignm gaps (pig, cow): 169, 59

Conread position: 13-403
Cow position: chrX:24770045-24769656 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:25451147-25451537 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 133

Conread position: 13-403
Cow position: chrX:27304742-27305130 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 128

Conread position: 13-403
Cow position: chrX:27754239-27754629 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 288
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:29082883-29083268 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 153

Conread position: 13-403
Cow position: chrX:29880468-29880079 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 293
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 248

Conread position: 13-403
Cow position: chrX:30059707-30060088 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 101

Conread position: 13-403
Cow position: chrX:30181113-30180723 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 245

Conread position: 13-403
Cow position: chrX:31495548-31495937 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:31728279-31728664 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 285
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 39

Conread position: 13-403
Cow position: chrX:31979028-31978640 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 118

Conread position: 13-403
Cow position: chrX:34760877-34761267 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 244

Conread position: 13-403
Cow position: chrX:35532667-35533055 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 177

Conread position: 13-403
Cow position: chrX:36535918-36535530 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 222

Conread position: 13-403
Cow position: chrX:38962039-38961649 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 294
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 252

Conread position: 13-403
Cow position: chrX:39713362-39713752 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 246

Conread position: 13-403
Cow position: chrX:41156123-41156512 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 232

Conread position: 13-403
Cow position: chrX:42732683-42733073 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 86, 81

Conread position: 13-403
Cow position: chrX:44193625-44193239 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 359, 246

Conread position: 13-406
Cow position: chrX:7551990-7551597 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 295
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 253

Conread position: 13-438
Cow position: chrX:18950925-18950500 (view UCSC Genome Browser custom track)
Alignm length: 431
Alignm identity: 308
Alignm E-value: 0
Alignm gaps (pig, cow): 314, 253

Conread position: 14-401
Cow position: chrX:29099231-29099616 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 209

Conread position: 14-403
Cow position: chrX:5375464-5375076 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 291
Alignm E-value: 0
Alignm gaps (pig, cow): 313, 98

Conread position: 15-394
Cow position: chrX:16045785-16046160 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 116, 245

Conread position: 15-401
Cow position: chrX:18656992-18656606 (view UCSC Genome Browser custom track)
Alignm length: 392
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 244

Conread position: 15-402
Cow position: chrX:27497645-27498029 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 82

Conread position: 15-403
Cow position: chrX:11462180-11461795 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 287
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 243

Conread position: 15-403
Cow position: chrX:16087309-16086922 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 315, 9

Conread position: 15-403
Cow position: chrX:17782315-17782701 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 312, 9

Conread position: 15-403
Cow position: chrX:29287810-29288194 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 210

Conread position: 23-325
Cow position: chrX:9535359-9535661 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 45, 195

Conread position: 24-403
Cow position: chrX:16782108-16782481 (view UCSC Genome Browser custom track)
Alignm length: 385
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 303, 101

Conread position: 27-385
Cow position: chrX:25817992-25817645 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 318, 235

Conread position: 28-403
Cow position: chrX:21685447-21685820 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 283
Alignm E-value: 0
Alignm gaps (pig, cow): 299, 113

Conread position: 34-325
Cow position: chrX:37815011-37815296 (view UCSC Genome Browser custom track)
Alignm length: 293
Alignm identity: 221
Alignm E-value: 0
Alignm gaps (pig, cow): 138, 219

Conread position: 34-403
Cow position: chrX:10445581-10445214 (view UCSC Genome Browser custom track)
Alignm length: 375
Alignm identity: 268
Alignm E-value: 0
Alignm gaps (pig, cow): 293, 101

Conread position: 41-403
Cow position: chrX:17664076-17663715 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 279
Alignm E-value: 0
Alignm gaps (pig, cow): 130, 212

Conread position: 42-403
Cow position: chrX:6406196-6406555 (view UCSC Genome Browser custom track)
Alignm length: 371
Alignm identity: 273
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 49

Conread position: 47-367
Cow position: chrX:10439063-10438743 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 250
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 74

Conread position: 49-402
Cow position: chrX:9011178-9011531 (view UCSC Genome Browser custom track)
Alignm length: 359
Alignm identity: 258
Alignm E-value: 0
Alignm gaps (pig, cow): 278, 210

Conread position: 59-403
Cow position: chrX:11499917-11499575 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 260
Alignm E-value: 0
Alignm gaps (pig, cow): 268, 176

Conread position: 76-403
Cow position: chrX:16702545-16702872 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 244
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 190

Conread position: 76-403
Cow position: chrX:16710830-16711157 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 246
Alignm E-value: 0
Alignm gaps (pig, cow): 251, 181

Conread position: 84-401
Cow position: chrX:8590462-8590781 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 162, 176

Conread position: 91-403
Cow position: chrX:12289624-12289922 (view UCSC Genome Browser custom track)
Alignm length: 317
Alignm identity: 219
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 22, 72

Conread position: 95-403
Cow position: chrX:34221655-34221966 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 240
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 18, 64

Conread position: 102-403
Cow position: chrX:26760668-26760367 (view UCSC Genome Browser custom track)
Alignm length: 307
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 154

Conread position: 103-403
Cow position: chrX:12310484-12310188 (view UCSC Genome Browser custom track)
Alignm length: 306
Alignm identity: 238
Alignm E-value: 0
Alignm gaps (pig, cow): 224, 134

Conread position: 127-406
Cow position: chrX:36839639-36839910 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 206
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 240, 15

Conread position: 138-403
Cow position: chrX:33804050-33803794 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 197
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 231, 115

Conread position: 140-403
Cow position: chrX:22887600-22887861 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 183
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 187, 119

Conread position: 141-403
Cow position: chrX:3465135-3464876 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 190
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 189, 111

Conread position: 145-367
Cow position: chrX:21750299-21750081 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 164
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 181, 120

Conread position: 145-403
Cow position: chrX:38150632-38150889 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 187
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 182, 90

Conread position: 159-403
Cow position: chrX:1056431-1056186 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 180
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 12, 101

Conread position: 164-403
Cow position: chrX:13031688-13031451 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 173
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 164, 95

Conread position: 175-346
Cow position: chrX:2933029-2932859 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 152, 82

Conread position: 213-403
Cow position: chrX:21254790-21254980 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 114, 46

Conread position: 413-585
Cow position: chrX:6463581-6463755 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 19

Conread position: 416-571
Cow position: chrX:5900443-5900605 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 416-586
Cow position: chrX:38227119-38226952 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 77, 0

Conread position: 418-580
Cow position: chrX:11656068-11656233 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 17, 0

Conread position: 421-588
Cow position: chrX:42381120-42380951 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 14, 0

Conread position: 426-570
Cow position: chrX:17966340-17966483 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 114
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 29, 12

Conread position: 427-567
Cow position: chrX:29680259-29680122 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 428-571
Cow position: chrX:8869401-8869258 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 108
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 126, 8

Conread position: 429-571
Cow position: chrX:878378-878237 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 429-585
Cow position: chrX:31312031-31312186 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 15, 0

Conread position: 431-571
Cow position: chrX:9201551-9201691 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 431-580
Cow position: chrX:27668955-27668806 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 431-584
Cow position: chrX:35985823-35985973 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 431-588
Cow position: chrX:40532040-40531883 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 77, 82

Conread position: 432-563
Cow position: chrX:46070168-46070033 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 432-587
Cow position: chrX:38208540-38208386 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 122, 40

Conread position: 433-571
Cow position: chrX:47342121-47342258 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 434-576
Cow position: chrX:20584334-20584476 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 434-588
Cow position: chrX:22115311-22115156 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 133, 0

Conread position: 435-567
Cow position: chrX:4616004-4615872 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 101
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 15, 112

Conread position: 436-560
Cow position: chrX:27431910-27431786 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 436-570
Cow position: chrX:28940250-28940387 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 104
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 436-570
Cow position: chrX:41871075-41871209 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 436-570
Cow position: chrX:42927816-42927682 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 99
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 436-579
Cow position: chrX:32877367-32877225 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 17

Conread position: 436-581
Cow position: chrX:21986282-21986139 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 36, 0

Conread position: 436-586
Cow position: chrX:7695759-7695906 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 436-588
Cow position: chrX:41941631-41941783 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 108
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 437-586
Cow position: chrX:12437261-12437114 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 0

Conread position: 438-571
Cow position: chrX:31436484-31436617 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 439-578
Cow position: chrX:753163-753306 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 50, 0

Conread position: 441-569
Cow position: chrX:10305334-10305210 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 101
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 67, 40

Conread position: 441-571
Cow position: chrX:4153018-4152888 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 441-577
Cow position: chrX:25788892-25788757 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 441-583
Cow position: chrX:40035428-40035285 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 33

Conread position: 441-585
Cow position: chrX:23266428-23266573 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 8e-32
Alignm gaps (pig, cow): 131, 0

Conread position: 441-586
Cow position: chrX:34411859-34412004 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 441-587
Cow position: chrX:33654831-33654685 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 67, 72

Conread position: 441-588
Cow position: chrX:16575125-16575272 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 441-588
Cow position: chrX:31489533-31489680 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-556
Cow position: chrX:37665705-37665819 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 90
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-561
Cow position: chrX:7277925-7278044 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-564
Cow position: chrX:917353-917232 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 13, 0

Conread position: 442-565
Cow position: chrX:39220093-39220216 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 99
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 442-567
Cow position: chrX:20678124-20678003 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 98
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 0

Conread position: 442-567
Cow position: chrX:24054685-24054816 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 26, 0

Conread position: 442-567
Cow position: chrX:36514879-36514753 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 96
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 442-567
Cow position: chrX:41123076-41123198 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 17, 0

Conread position: 442-567
Cow position: chrX:42836195-42836320 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-568
Cow position: chrX:29194246-29194370 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 101
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 97, 29

Conread position: 442-568
Cow position: chrX:29733578-29733452 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 442-568
Cow position: chrX:31294558-31294432 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-568
Cow position: chrX:32910118-32910239 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 442-568
Cow position: chrX:46429805-46429679 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-569
Cow position: chrX:4645899-4645772 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 96
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 442-569
Cow position: chrX:23113299-23113426 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-569
Cow position: chrX:29553299-29553426 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 99
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 442-569
Cow position: chrX:31829447-31829320 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 102
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-570
Cow position: chrX:20743618-20743746 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-571
Cow position: chrX:22915026-22914899 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 104
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 442-571
Cow position: chrX:38218728-38218859 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 106
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 442-571
Cow position: chrX:42282591-42282719 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 30, 35

Conread position: 442-572
Cow position: chrX:29478738-29478867 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 61, 0

Conread position: 442-573
Cow position: chrX:11073177-11073047 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 102
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 442-575
Cow position: chrX:19943220-19943089 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 102
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 63, 0

Conread position: 442-577
Cow position: chrX:41068739-41068874 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 106
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 442-578
Cow position: chrX:23188766-23188634 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 442-580
Cow position: chrX:6260133-6259996 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 122, 17

Conread position: 442-580
Cow position: chrX:23562646-23562784 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 107
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 442-580
Cow position: chrX:39180219-39180082 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 442-580
Cow position: chrX:42247168-42247030 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 111
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chrX:23091884-23092026 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 114
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 68, 0

Conread position: 442-581
Cow position: chrX:24170715-24170577 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 442-581
Cow position: chrX:25411921-25412058 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 442-581
Cow position: chrX:27261205-27261345 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 104
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 442-581
Cow position: chrX:27511442-27511581 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chrX:28878160-28878021 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 442-581
Cow position: chrX:38094502-38094368 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 111
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 442-581
Cow position: chrX:42873401-42873538 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 83, 41

Conread position: 442-581
Cow position: chrX:42893938-42894078 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 27, 130

Conread position: 442-583
Cow position: chrX:3806696-3806836 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 112
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 128, 0

Conread position: 442-585
Cow position: chrX:31515187-31515332 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 0

Conread position: 442-586
Cow position: chrX:1122529-1122389 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 442-586
Cow position: chrX:4043849-4043709 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 442-586
Cow position: chrX:4559753-4559891 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 33, 0

Conread position: 442-586
Cow position: chrX:7710525-7710380 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 138, 0

Conread position: 442-586
Cow position: chrX:9365662-9365516 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 128, 0

Conread position: 442-586
Cow position: chrX:11085049-11084907 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 106
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 442-586
Cow position: chrX:15147179-15147038 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 127, 43

Conread position: 442-586
Cow position: chrX:27394012-27393868 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 442-586
Cow position: chrX:34502934-34503080 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 128, 0

Conread position: 442-586
Cow position: chrX:42855472-42855616 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 118
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 442-587
Cow position: chrX:42450000-42449855 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 110
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 442-588
Cow position: chrX:6407560-6407703 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 17, 0

Conread position: 442-588
Cow position: chrX:19018817-19018671 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 107
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 442-588
Cow position: chrX:38301823-38301969 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 442-588
Cow position: chrX:40680628-40680774 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 442-588
Cow position: chrX:42492509-42492362 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 130, 106

Conread position: 443-560
Cow position: chrX:23561872-23561990 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 68, 0

Conread position: 443-568
Cow position: chrX:34565301-34565423 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 443-569
Cow position: chrX:43779832-43779711 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 98
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 90, 0

Conread position: 443-574
Cow position: chrX:29121062-29121193 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 104
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 443-575
Cow position: chrX:11762986-11762855 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 443-580
Cow position: chrX:16984656-16984792 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 103, 0

Conread position: 443-581
Cow position: chrX:11653779-11653923 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 39, 0

Conread position: 443-585
Cow position: chrX:19097209-19097063 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 28, 74

Conread position: 443-588
Cow position: chrX:37129284-37129429 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 444-566
Cow position: chrX:6690244-6690122 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 444-571
Cow position: chrX:31442813-31442686 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 64, 74

Conread position: 444-571
Cow position: chrX:32821045-32821171 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 104
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 32, 0

Conread position: 444-575
Cow position: chrX:27075035-27074904 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 101
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 444-579
Cow position: chrX:41238338-41238204 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 46, 0

Conread position: 444-580
Cow position: chrX:5872333-5872469 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 444-580
Cow position: chrX:38728750-38728886 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 102
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 444-581
Cow position: chrX:8797272-8797402 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 40, 0

Conread position: 444-581
Cow position: chrX:11717767-11717630 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 72

Conread position: 444-581
Cow position: chrX:20583682-20583821 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 103
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 129, 0

Conread position: 444-586
Cow position: chrX:169529-169388 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 109
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 444-586
Cow position: chrX:35383020-35382879 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 67, 0

Conread position: 444-586
Cow position: chrX:38964124-38964266 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 444-588
Cow position: chrX:38549461-38549607 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 118
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 19, 31

Conread position: 444-588
Cow position: chrX:40108503-40108358 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 106
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 445-581
Cow position: chrX:29601811-29601675 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 111
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 445-586
Cow position: chrX:25459717-25459570 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 84, 51

Conread position: 445-588
Cow position: chrX:41027177-41027319 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 111
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 7, 0

Conread position: 446-586
Cow position: chrX:28865984-28865849 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 39, 0

Conread position: 446-586
Cow position: chrX:43730205-43730066 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 111
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 20, 0

Conread position: 449-565
Cow position: chrX:10411965-10411847 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 449-567
Cow position: chrX:46072796-46072678 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 449-571
Cow position: chrX:41810147-41810025 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 95
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 449-586
Cow position: chrX:17888398-17888265 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 107
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 36, 0

Conread position: 449-587
Cow position: chrX:35285194-35285332 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 450-569
Cow position: chrX:40355057-40355172 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 450-571
Cow position: chrX:10075995-10076114 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 97
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 450-586
Cow position: chrX:23498655-23498522 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 110
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 44, 0

Conread position: 450-588
Cow position: chrX:20339870-20339734 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 75, 0

Conread position: 451-578
Cow position: chrX:5026279-5026407 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 97
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 121, 0

Conread position: 452-571
Cow position: chrX:33639999-33640118 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 94
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 452-581
Cow position: chrX:32866899-32867028 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 100
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 452-581
Cow position: chrX:37062561-37062431 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 103
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 102, 0

Conread position: 459-579
Cow position: chrX:48822311-48822192 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 97
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 111, 0

Conread position: 460-571
Cow position: chrX:2551123-2551235 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 91
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 50, 0

Conread position: 460-571
Cow position: chrX:46909847-46909958 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 90
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 460-585
Cow position: chrX:29563050-29562929 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 102
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 34, 0

Conread position: 460-588
Cow position: chrX:2314587-2314459 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 93, 88

Conread position: 464-581
Cow position: chrX:27667461-27667578 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 91
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 464-581
Cow position: chrX:42331320-42331436 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 92
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 101, 0

Conread position: 464-586
Cow position: chrX:23574691-23574811 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 465-586
Cow position: chrX:42875250-42875370 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 472-585
Cow position: chrX:41991090-41990977 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 36, 46

Conread position: 474-570
Cow position: chrX:30831287-30831191 (view UCSC Genome Browser custom track)
Alignm length: 97
Alignm identity: 80
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 475-588
Cow position: chrX:31252455-31252567 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 476-580
Cow position: chrX:32747780-32747884 (view UCSC Genome Browser custom track)
Alignm length: 105
Alignm identity: 84
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.