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Cow genome map

           
Conread name:
           
rpigcf0_010415.y1
        

               
Conread position:
               
140-350
               

               
Cow position:
               
chr11:26535746-26535954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
75, 21
               

               
Conread position:
               
144-337
               

               
Cow position:
               
chr11:17807996-17807806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
18, 34
               

               
Conread position:
               
149-352
               

               
Cow position:
               
chr11:51683186-51683388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 18
               

               
Conread position:
               
162-352
               

               
Cow position:
               
chr11:63499147-63498959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
53, 41
               

               
Conread position:
               
166-353
               

               
Cow position:
               
chr11:19579030-19578849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
167-352
               

               
Cow position:
               
chr11:37564860-37565041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
48, 23
               

               
Conread position:
               
169-352
               

               
Cow position:
               
chr11:25620400-25620218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
185-352
               

               
Cow position:
               
chr11:8545014-8544845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
30, 159
               

               
Conread position:
               
194-350
               

               
Cow position:
               
chr11:3896688-3896528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 15
               

               
Conread position:
               
194-352
               

               
Cow position:
               
chr11:21885846-21886002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
21, 33
               

               
Conread position:
               
194-352
               

               
Cow position:
               
chr11:46427395-46427235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 144
               

               
Conread position:
               
194-352
               

               
Cow position:
               
chr11:66939580-66939419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
194-352
               

               
Cow position:
               
chr11:67312793-67312957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
21, 148
               

               
Conread position:
               
200-352
               

               
Cow position:
               
chr11:42835931-42835781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
15, 7
               

               
Conread position:
               
202-350
               

               
Cow position:
               
chr11:15881400-15881250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
203-348
               

               
Cow position:
               
chr11:63695823-63695671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 5
               

               
Conread position:
               
203-350
               

               
Cow position:
               
chr11:70458064-70458214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
203-352
               

               
Cow position:
               
chr11:17369551-17369698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
206-352
               

               
Cow position:
               
chr11:41215757-41215905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 114
               

               
Conread position:
               
206-352
               

               
Cow position:
               
chr11:86895401-86895544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 79
               

               
Conread position:
               
206-353
               

               
Cow position:
               
chr11:68909830-68909680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
207-315
               

               
Cow position:
               
chr11:81614488-81614379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-332
               

               
Cow position:
               
chr11:35139934-35140060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-334
               

               
Cow position:
               
chr11:4363888-4363761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
207-334
               

               
Cow position:
               
chr11:34136266-34136393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
207-334
               

               
Cow position:
               
chr11:35922172-35922044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
207-336
               

               
Cow position:
               
chr11:71868577-71868448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 96
               

               
Conread position:
               
207-344
               

               
Cow position:
               
chr11:18509005-18508865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-344
               

               
Cow position:
               
chr11:31875118-31875258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-347
               

               
Cow position:
               
chr11:7652041-7651901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
207-347
               

               
Cow position:
               
chr11:60486393-60486249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 124
               

               
Conread position:
               
207-348
               

               
Cow position:
               
chr11:1980242-1980097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
207-348
               

               
Cow position:
               
chr11:4199296-4199442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-348
               

               
Cow position:
               
chr11:35924086-35924230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 109
               

               
Conread position:
               
207-348
               

               
Cow position:
               
chr11:37804528-37804384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-348
               

               
Cow position:
               
chr11:64408998-64409134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
207-349
               

               
Cow position:
               
chr11:35926883-35926740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 47
               

               
Conread position:
               
207-349
               

               
Cow position:
               
chr11:38236277-38236414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 112
               

               
Conread position:
               
207-349
               

               
Cow position:
               
chr11:63435546-63435691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-350
               

               
Cow position:
               
chr11:46747835-46747689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-350
               

               
Cow position:
               
chr11:55117470-55117613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
207-350
               

               
Cow position:
               
chr11:79666236-79666092 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:2835884-2836031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:10095369-10095514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 73
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:15369413-15369560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:17517424-17517570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 131
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:27760543-27760689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 122
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:30600166-30600019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:32800651-32800798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:35149424-35149573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:37435962-37435819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:53816878-53817026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:67208278-67208420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:69417427-69417574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:76248075-76248217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 58
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:83397931-83398078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-351
               

               
Cow position:
               
chr11:84385613-84385469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:2084169-2084317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:6320107-6319959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:6580858-6581006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:7571650-7571792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 21
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:7874164-7874312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:12555280-12555132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:13500041-13500182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:13940211-13940359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 106
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:15772688-15772541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 77
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:16314898-16315046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 57
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:18924771-18924919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:19247174-19247033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 83
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:19591969-19591824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:25783738-25783887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:25968828-25968681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 13
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:29786473-29786321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:30209797-30209651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:30322467-30322322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:30808568-30808425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 127
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:34644680-34644830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:34968588-34968441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:35347727-35347579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:36300556-36300412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:36361617-36361469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:36847193-36847341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:37100147-37100000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 71
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:39462649-39462791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 85
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:41980179-41980032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 131
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:42016614-42016467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 141
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:42084650-42084501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:42497870-42498016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
127, 71
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:43914317-43914465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:45277126-45276976 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 48
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:45350486-45350338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:46314036-46314185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:46329525-46329670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 135
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:47784800-47784952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:57608434-57608294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 58
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:57767215-57767361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:58048357-58048503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
9, 66
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:60296755-60296910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:62102422-62102274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:62811323-62811468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 32
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:63407721-63407866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 8
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:63484963-63485104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:63849926-63849778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:68913166-68913315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:70422569-70422423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:70483826-70483679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 74
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:70600803-70600655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:76896349-76896201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-352
               

               
Cow position:
               
chr11:80370139-80370286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:1067414-1067265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:8670037-8670190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:9237821-9237675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 125
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:13043120-13042975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
8, 84
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:13592761-13592912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:19549506-19549649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 20
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:21173412-21173264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:26343127-26343275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:27913310-27913459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
8, 85
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:29677232-29677380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
9, 72
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:33369176-33369325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:33373991-33374139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
8, 116
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:34778418-34778269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:36920551-36920405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 93
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:38334549-38334694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
8, 66
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:44619980-44620126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 129
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:46010228-46010086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 118
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:46884399-46884548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:47110274-47110429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:47411866-47412015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
8, 33
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:50472342-50472491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:53778642-53778793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:56288570-56288718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:60720430-60720281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:62742620-62742475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 76
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:62889868-62889719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:64101797-64101946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
8, 138
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:68570355-68570208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
8, 72
               

               
Conread position:
               
207-353
               

               
Cow position:
               
chr11:68883744-68883893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
208-349
               

               
Cow position:
               
chr11:26632987-26632844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
208-352
               

               
Cow position:
               
chr11:6233853-6233706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
208-352
               

               
Cow position:
               
chr11:6245341-6245493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
208-352
               

               
Cow position:
               
chr11:15366946-15366806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
7, 81
               

               
Conread position:
               
208-353
               

               
Cow position:
               
chr11:23220389-23220533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
7, 74
               

               
Conread position:
               
208-353
               

               
Cow position:
               
chr11:36182721-36182864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
7, 72
               

               
Conread position:
               
209-334
               

               
Cow position:
               
chr11:30370132-30370254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
6, 71
               

               
Conread position:
               
209-350
               

               
Cow position:
               
chr11:21830182-21830041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
6, 61
               

               
Conread position:
               
209-350
               

               
Cow position:
               
chr11:55744495-55744639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
209-351
               

               
Cow position:
               
chr11:40459135-40459276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 125
               

               
Conread position:
               
209-352
               

               
Cow position:
               
chr11:18119532-18119674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
123, 20
               

               
Conread position:
               
209-352
               

               
Cow position:
               
chr11:44176623-44176765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
6, 75
               

               
Conread position:
               
209-352
               

               
Cow position:
               
chr11:63475645-63475499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
209-352
               

               
Cow position:
               
chr11:80296825-80296687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
6, 82
               

               
Conread position:
               
210-330
               

               
Cow position:
               
chr11:53510474-53510353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
210-332
               

               
Cow position:
               
chr11:8684051-8683928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
210-350
               

               
Cow position:
               
chr11:9836428-9836285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
210-350
               

               
Cow position:
               
chr11:35733055-35732913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
5, 78
               

               
Conread position:
               
210-352
               

               
Cow position:
               
chr11:26144067-26143927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
5, 127
               

               
Conread position:
               
210-353
               

               
Cow position:
               
chr11:34279771-34279909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
5, 114
               

               
Conread position:
               
211-349
               

               
Cow position:
               
chr11:34144894-34144750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
211-352
               

               
Cow position:
               
chr11:41134050-41133908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
213-334
               

               
Cow position:
               
chr11:18792034-18791911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
214-325
               

               
Cow position:
               
chr11:69624539-69624428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-334
               

               
Cow position:
               
chr11:63202215-63202095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-346
               

               
Cow position:
               
chr11:81406133-81406001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
118, 55
               

               
Conread position:
               
214-346
               

               
Cow position:
               
chr11:87155553-87155684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
214-350
               

               
Cow position:
               
chr11:12742457-12742324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
116, 67
               

               
Conread position:
               
214-350
               

               
Cow position:
               
chr11:25791661-25791523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
214-350
               

               
Cow position:
               
chr11:26057617-26057477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
214-351
               

               
Cow position:
               
chr11:18574822-18574683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
214-351
               

               
Cow position:
               
chr11:35352007-35351862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr11:27907810-27907942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 27
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr11:30165543-30165683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr11:41278219-41278359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr11:52690487-52690353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
122, 50
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr11:56348797-56348659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
120, 97
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr11:64781120-64781260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
214-352
               

               
Cow position:
               
chr11:87172043-87171904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
122, 88
               

               
Conread position:
               
214-353
               

               
Cow position:
               
chr11:17889695-17889554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
214-353
               

               
Cow position:
               
chr11:43641420-43641561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
214-353
               

               
Cow position:
               
chr11:66188283-66188148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
215-350
               

               
Cow position:
               
chr11:33271465-33271599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
121, 57
               

               
Conread position:
               
215-350
               

               
Cow position:
               
chr11:44016278-44016415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
215-352
               

               
Cow position:
               
chr11:63491052-63491191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
215-353
               

               
Cow position:
               
chr11:24551425-24551564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
47, 14
               

               
Conread position:
               
215-353
               

               
Cow position:
               
chr11:32817782-32817643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
121, 51
               

               
Conread position:
               
215-353
               

               
Cow position:
               
chr11:84757867-84757998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
216-352
               

               
Cow position:
               
chr11:28078529-28078661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
123, 66
               

               
Conread position:
               
217-351
               

               
Cow position:
               
chr11:35109501-35109369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
217-352
               

               
Cow position:
               
chr11:21124574-21124437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
217-352
               

               
Cow position:
               
chr11:41213086-41213224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
217-352
               

               
Cow position:
               
chr11:65436257-65436394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 106
               

               
Conread position:
               
219-352
               

               
Cow position:
               
chr11:26823148-26823284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
224-350
               

               
Cow position:
               
chr11:14447553-14447681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
225-352
               

               
Cow position:
               
chr11:4436376-4436504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 105
               

               
Conread position:
               
226-352
               

               
Cow position:
               
chr11:53460742-53460870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
40, 47
               

               
Conread position:
               
226-352
               

               
Cow position:
               
chr11:83042198-83042068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
226-353
               

               
Cow position:
               
chr11:80695197-80695068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
228-352
               

               
Cow position:
               
chr11:64029219-64029095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
108, 36
               

               
Conread position:
               
229-347
               

               
Cow position:
               
chr11:38657135-38657015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
229-350
               

               
Cow position:
               
chr11:899482-899606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
229-352
               

               
Cow position:
               
chr11:65939814-65939690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 99
               

               
Conread position:
               
229-353
               

               
Cow position:
               
chr11:8828054-8828183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
234-351
               

               
Cow position:
               
chr11:33368127-33368242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
235-352
               

               
Cow position:
               
chr11:43594374-43594256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
101, 43
               

               
Conread position:
               
236-352
               

               
Cow position:
               
chr11:67345608-67345487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
122
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
236-352
               

               
Cow position:
               
chr11:69035214-69035332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
236-352
               

               
Cow position:
               
chr11:76890101-76890213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
236-353
               

               
Cow position:
               
chr11:58022060-58021938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
45, 105
               

               
Conread position:
               
238-349
               

               
Cow position:
               
chr11:57873866-57873977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 54
               

               
Conread position:
               
238-351
               

               
Cow position:
               
chr11:67417866-67417980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
98, 49
               

               
Conread position:
               
238-352
               

               
Cow position:
               
chr11:30708559-30708677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
238-352
               

               
Cow position:
               
chr11:68592075-68592191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
95
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
238-353
               

               
Cow position:
               
chr11:75479966-75479849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
118
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
242-351
               

               
Cow position:
               
chr11:48888301-48888192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
110
               

               
Alignm identity:
               
87
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
245-352
               

               
Cow position:
               
chr11:70273525-70273633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
109
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
257-351
               

               
Cow position:
               
chr11:17221487-17221392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
97
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 7
               

               
Conread position:
               
261-352
               

               
Cow position:
               
chr11:41295143-41295051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
94
               

               
Alignm identity:
               
81
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
75, 23
               
Show alignments to all cow chromosomes.