Cow genome map


           Conread name:
           rpigcf0_010415.y1
        

               Conread position:
               165-344
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               132
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               11, 94
               

               Conread position:
               167-353
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               48, 169
               

               Conread position:
               175-352
               

               Cow position:
               
               

               Alignm length:
               184
               

               Alignm identity:
               136
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               13, 34
               

               Conread position:
               194-352
               

               Cow position:
               
               

               Alignm length:
               162
               

               Alignm identity:
               120
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               21, 11
               

               Conread position:
               200-334
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               15, 8
               

               Conread position:
               203-351
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               12, 64
               

               Conread position:
               205-353
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               206-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               130, 66
               

               Conread position:
               206-353
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 27
               

               Conread position:
               207-334
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               207-334
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-348
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-348
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 124
               

               Conread position:
               207-349
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-349
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 90
               

               Conread position:
               207-349
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-349
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 130
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               122
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               8, 113
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               120
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               129, 0
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               8, 52
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 76
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 78
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 114
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 72
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               8, 26
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               118
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               8, 23
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 20
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               8, 59
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               125, 25
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 77
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               8, 37
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               8, 75
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               8, 17
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 21
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               208-348
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               208-350
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               116
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 123
               

               Conread position:
               208-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 75
               

               Conread position:
               208-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               7, 136
               

               Conread position:
               208-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               7, 65
               

               Conread position:
               208-353
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 63
               

               Conread position:
               209-344
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               112
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               123, 0
               

               Conread position:
               209-349
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               209-351
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               76, 6
               

               Conread position:
               209-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               209-352
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               209-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               6, 81
               

               Conread position:
               210-350
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               109
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               210-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               110
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               210-352
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               5, 86
               

               Conread position:
               210-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               210-352
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               214-350
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               58, 0
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               110
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               122, 12
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               122, 50
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 12
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               214-353
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               111
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               125, 0
               

               Conread position:
               216-350
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               108
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               57, 0
               

               Conread position:
               216-352
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               116, 79
               

               Conread position:
               216-352
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               120, 66
               

               Conread position:
               216-352
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               121, 0
               

               Conread position:
               216-352
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               104
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               62, 115
               

               Conread position:
               216-353
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               217-350
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               106
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               222-351
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               107
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               111, 0
               

               Conread position:
               226-352
               

               Cow position:
               
               

               Alignm length:
               127
               

               Alignm identity:
               100
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               226-353
               

               Cow position:
               
               

               Alignm length:
               130
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               110, 38
               

               Conread position:
               236-332
               

               Cow position:
               
               

               Alignm length:
               97
               

               Alignm identity:
               84
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               236-352
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               102
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               236-352
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               236-352
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               98
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               33, 48
               

               Conread position:
               237-346
               

               Cow position:
               
               

               Alignm length:
               112
               

               Alignm identity:
               95
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               237-352
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               96
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               96, 0
               

               Conread position:
               238-352
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               92
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 0
               

               Conread position:
               239-353
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               95
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               93, 108
               

               Conread position:
               241-352
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               245-352
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               92
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               245-352
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               88
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               256-352
               

               Cow position:
               
               

               Alignm length:
               99
               

               Alignm identity:
               83
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               80, 0
               
Show alignments to all cow chromosomes.