Cow genome map

Conread name: rpigcf0_010415.y1

Conread position: 140-351
Cow position: chr25:36535444-36535233 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 152
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 55, 46

Conread position: 173-326
Cow position: chr25:23769881-23769730 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 111

Conread position: 179-352
Cow position: chr25:20008147-20008320 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 36, 16

Conread position: 191-352
Cow position: chr25:7185252-7185087 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 0

Conread position: 192-349
Cow position: chr25:32750100-32750259 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 19, 0

Conread position: 195-350
Cow position: chr25:9641008-9640850 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 20, 0

Conread position: 201-352
Cow position: chr25:14457185-14457338 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 135, 0

Conread position: 203-351
Cow position: chr25:13443373-13443222 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 205-349
Cow position: chr25:22570997-22571142 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 92

Conread position: 206-352
Cow position: chr25:33272673-33272824 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 10, 0

Conread position: 207-347
Cow position: chr25:11855508-11855366 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 120
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 129, 0

Conread position: 207-347
Cow position: chr25:17474472-17474331 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 110
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 207-348
Cow position: chr25:14164236-14164380 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 207-349
Cow position: chr25:7311355-7311210 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 207-349
Cow position: chr25:23323531-23323680 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 8, 0

Conread position: 207-349
Cow position: chr25:37965298-37965446 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 68

Conread position: 207-350
Cow position: chr25:11956845-11956988 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 74

Conread position: 207-350
Cow position: chr25:17724183-17724036 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 207-350
Cow position: chr25:26087560-26087702 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 88

Conread position: 207-350
Cow position: chr25:33311285-33311139 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 207-350
Cow position: chr25:35802622-35802479 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 125

Conread position: 207-351
Cow position: chr25:7403300-7403153 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 207-351
Cow position: chr25:18551293-18551148 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 8, 33

Conread position: 207-352
Cow position: chr25:433007-432862 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 8, 129

Conread position: 207-352
Cow position: chr25:1763128-1763270 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 87

Conread position: 207-352
Cow position: chr25:1838282-1838429 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 8, 67

Conread position: 207-352
Cow position: chr25:5807986-5808134 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:6061401-6061547 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:7380798-7380652 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 71

Conread position: 207-352
Cow position: chr25:8410993-8410847 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 97

Conread position: 207-352
Cow position: chr25:9494746-9494895 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 12

Conread position: 207-352
Cow position: chr25:11857946-11857800 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 74

Conread position: 207-352
Cow position: chr25:14225403-14225553 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:15999511-15999364 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 9, 58

Conread position: 207-352
Cow position: chr25:17119783-17119930 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 82

Conread position: 207-352
Cow position: chr25:17919015-17919163 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 119
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 114

Conread position: 207-352
Cow position: chr25:18201888-18201743 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 8, 129

Conread position: 207-352
Cow position: chr25:18491079-18491223 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 76

Conread position: 207-352
Cow position: chr25:20487397-20487249 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:22756650-22756798 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:26061686-26061538 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:26269676-26269528 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:26989238-26989387 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr25:28945061-28945202 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 111
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 8, 75

Conread position: 207-352
Cow position: chr25:33100616-33100758 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 8, 76

Conread position: 207-353
Cow position: chr25:3141544-3141688 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 72

Conread position: 207-353
Cow position: chr25:12305317-12305466 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 207-353
Cow position: chr25:18646626-18646767 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 83

Conread position: 207-353
Cow position: chr25:21547198-21547344 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 72

Conread position: 207-353
Cow position: chr25:22373449-22373299 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 122
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 9, 0

Conread position: 207-353
Cow position: chr25:30816930-30817079 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 207-353
Cow position: chr25:31514222-31514371 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 207-353
Cow position: chr25:33686644-33686495 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 9, 0

Conread position: 208-334
Cow position: chr25:18568175-18568048 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 110
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 7, 0

Conread position: 208-348
Cow position: chr25:36873014-36872873 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 7, 75

Conread position: 208-350
Cow position: chr25:23519990-23519853 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 110
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 84

Conread position: 208-352
Cow position: chr25:7673343-7673493 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 113
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 7, 0

Conread position: 208-352
Cow position: chr25:26306162-26306017 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 76

Conread position: 208-353
Cow position: chr25:14945086-14944941 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 7, 134

Conread position: 209-352
Cow position: chr25:5846766-5846619 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 7, 0

Conread position: 209-352
Cow position: chr25:13380558-13380412 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 0

Conread position: 209-352
Cow position: chr25:30319411-30319262 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 209-353
Cow position: chr25:16921754-16921606 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 6, 0

Conread position: 209-353
Cow position: chr25:22154067-22154218 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 214-349
Cow position: chr25:7622868-7623005 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 125, 0

Conread position: 214-351
Cow position: chr25:9769465-9769604 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 214-352
Cow position: chr25:35052573-35052432 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 108
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 123, 0

Conread position: 214-352
Cow position: chr25:36369868-36370007 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 117, 16

Conread position: 214-352
Cow position: chr25:36375559-36375698 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 117, 16

Conread position: 214-352
Cow position: chr25:40904781-40904641 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 0

Conread position: 214-353
Cow position: chr25:22768267-22768405 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 109
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 119, 0

Conread position: 216-352
Cow position: chr25:28940090-28939954 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 108
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 120, 66

Conread position: 217-350
Cow position: chr25:22119605-22119472 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 108
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 219-352
Cow position: chr25:22642318-22642459 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 111
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 225-352
Cow position: chr25:19849924-19850051 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 53, 111

Conread position: 226-334
Cow position: chr25:22203638-22203531 (view UCSC Genome Browser custom track)
Alignm length: 109
Alignm identity: 89
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 44, 0

Conread position: 226-353
Cow position: chr25:11168941-11169065 (view UCSC Genome Browser custom track)
Alignm length: 128
Alignm identity: 98
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 229-334
Cow position: chr25:13049239-13049134 (view UCSC Genome Browser custom track)
Alignm length: 106
Alignm identity: 86
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 231-351
Cow position: chr25:13384547-13384671 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 236-347
Cow position: chr25:22917423-22917313 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 42

Conread position: 236-352
Cow position: chr25:12092685-12092805 (view UCSC Genome Browser custom track)
Alignm length: 121
Alignm identity: 100
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 42, 0

Conread position: 236-352
Cow position: chr25:12097904-12098023 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 236-352
Cow position: chr25:37648852-37648968 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 94
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 46

Conread position: 239-351
Cow position: chr25:17725107-17725220 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 95
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 97, 41

Conread position: 240-352
Cow position: chr25:13732832-13732945 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 96, 28

Conread position: 241-350
Cow position: chr25:12817726-12817837 (view UCSC Genome Browser custom track)
Alignm length: 112
Alignm identity: 89
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 241-352
Cow position: chr25:6812159-6812041 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 37, 0

Conread position: 242-353
Cow position: chr25:30462245-30462134 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 97
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 94, 10

Conread position: 257-352
Cow position: chr25:20018235-20018332 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 82
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 79, 0

Show alignments to all cow chromosomes.