Cow genome map

Conread name: rpigcf0_010415.y1

Conread position: 161-352
Cow position: chr29:42886963-42887158 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 16, 45

Conread position: 169-352
Cow position: chr29:11894700-11894887 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 200-351
Cow position: chr29:7124853-7125007 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 7

Conread position: 200-351
Cow position: chr29:30920369-30920214 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 15, 125

Conread position: 206-351
Cow position: chr29:24292908-24293056 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 10, 68

Conread position: 206-352
Cow position: chr29:11685207-11685356 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 207-334
Cow position: chr29:38582009-38582137 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 103
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 207-337
Cow position: chr29:29057216-29057346 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 84

Conread position: 207-343
Cow position: chr29:28257182-28257320 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 9, 74

Conread position: 207-344
Cow position: chr29:14828187-14828048 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 9, 52

Conread position: 207-347
Cow position: chr29:44684140-44684279 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 107
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 129, 74

Conread position: 207-349
Cow position: chr29:41422870-41422725 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 107
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 207-350
Cow position: chr29:4484137-4484282 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 85

Conread position: 207-350
Cow position: chr29:5520444-5520299 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 85

Conread position: 207-350
Cow position: chr29:22019146-22019002 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 9, 66

Conread position: 207-350
Cow position: chr29:22068699-22068556 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 8, 50

Conread position: 207-351
Cow position: chr29:6517270-6517414 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 114
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 35

Conread position: 207-351
Cow position: chr29:12025432-12025293 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 114
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 207-351
Cow position: chr29:16200437-16200290 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 0

Conread position: 207-351
Cow position: chr29:26017461-26017314 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 8, 0

Conread position: 207-351
Cow position: chr29:26211093-26211239 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 113
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 64

Conread position: 207-351
Cow position: chr29:28279246-28279101 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 8, 126

Conread position: 207-351
Cow position: chr29:35259026-35259167 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 111
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 8, 66

Conread position: 207-351
Cow position: chr29:35677502-35677355 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 0

Conread position: 207-352
Cow position: chr29:501238-501388 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 118

Conread position: 207-352
Cow position: chr29:1933530-1933383 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 116

Conread position: 207-352
Cow position: chr29:2056102-2056247 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 9, 89

Conread position: 207-352
Cow position: chr29:4120895-4121043 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 9, 0

Conread position: 207-352
Cow position: chr29:4648168-4648025 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 66

Conread position: 207-352
Cow position: chr29:7040831-7040681 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 0

Conread position: 207-352
Cow position: chr29:14576900-14577044 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 8, 66

Conread position: 207-352
Cow position: chr29:15947208-15947356 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:17297177-17297325 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 124
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:18878440-18878295 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 123
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 8, 129

Conread position: 207-352
Cow position: chr29:20167465-20167610 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 115
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 125

Conread position: 207-352
Cow position: chr29:21443297-21443154 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 127

Conread position: 207-352
Cow position: chr29:22534002-22534150 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:23874501-23874649 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:24188024-24187876 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 116
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:24604937-24605083 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 8, 84

Conread position: 207-352
Cow position: chr29:28420796-28420944 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:30294832-30294684 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 115
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:30440978-30441126 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 8, 40

Conread position: 207-352
Cow position: chr29:31489360-31489511 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 117
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:32656474-32656623 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 116
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:34675968-34675820 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 11, 115

Conread position: 207-352
Cow position: chr29:34744584-34744444 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 29

Conread position: 207-352
Cow position: chr29:34745617-34745474 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 8, 36

Conread position: 207-352
Cow position: chr29:35084181-35084036 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 66

Conread position: 207-352
Cow position: chr29:37618347-37618495 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 119
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 0

Conread position: 207-352
Cow position: chr29:38732194-38732342 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 110
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 6, 0

Conread position: 207-352
Cow position: chr29:41530891-41531038 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 114
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 8, 58

Conread position: 207-353
Cow position: chr29:4441163-4441017 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 122
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 8, 36

Conread position: 207-353
Cow position: chr29:16438738-16438584 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 8, 66

Conread position: 207-353
Cow position: chr29:16735265-16735414 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 8, 0

Conread position: 207-353
Cow position: chr29:18450097-18449950 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 117
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 70

Conread position: 208-348
Cow position: chr29:17109999-17110136 (view UCSC Genome Browser custom track)
Alignm length: 142
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 7, 76

Conread position: 208-353
Cow position: chr29:22577137-22576990 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 7, 70

Conread position: 208-353
Cow position: chr29:27042314-27042459 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 118
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 128

Conread position: 209-352
Cow position: chr29:8163786-8163640 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 114
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 209-352
Cow position: chr29:36357169-36357315 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 209-353
Cow position: chr29:23142291-23142144 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 117
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 6, 0

Conread position: 210-351
Cow position: chr29:16609792-16609936 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 5, 0

Conread position: 210-352
Cow position: chr29:5046697-5046840 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 5, 127

Conread position: 210-352
Cow position: chr29:31929033-31929173 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 17

Conread position: 212-349
Cow position: chr29:24365850-24365713 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 17

Conread position: 214-327
Cow position: chr29:18211740-18211627 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 214-337
Cow position: chr29:29447432-29447554 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 96
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 214-349
Cow position: chr29:24119451-24119314 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 111
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 122, 0

Conread position: 214-350
Cow position: chr29:23735039-23734901 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 103
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 122, 0

Conread position: 214-352
Cow position: chr29:11081347-11081207 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 124, 0

Conread position: 214-352
Cow position: chr29:30227232-30227093 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 113
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 122, 24

Conread position: 215-351
Cow position: chr29:7143345-7143485 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 216-351
Cow position: chr29:29183773-29183909 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 120, 22

Conread position: 216-351
Cow position: chr29:41094168-41094302 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 103
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 119, 0

Conread position: 216-352
Cow position: chr29:33321398-33321536 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 117, 0

Conread position: 219-352
Cow position: chr29:14746834-14746965 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 105
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 113, 66

Conread position: 219-352
Cow position: chr29:27881896-27882029 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 106
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 91, 59

Conread position: 236-333
Cow position: chr29:8669425-8669521 (view UCSC Genome Browser custom track)
Alignm length: 98
Alignm identity: 84
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 42, 0

Conread position: 236-350
Cow position: chr29:6515503-6515618 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 27

Conread position: 236-351
Cow position: chr29:16164365-16164248 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 95
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 0

Conread position: 236-352
Cow position: chr29:8841374-8841262 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 100, 55

Conread position: 236-352
Cow position: chr29:26777079-26777197 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 93
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 99, 0

Conread position: 236-353
Cow position: chr29:685107-684989 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 95
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 99, 30

Conread position: 236-353
Cow position: chr29:4741320-4741201 (view UCSC Genome Browser custom track)
Alignm length: 120
Alignm identity: 101
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 100, 0

Conread position: 238-350
Cow position: chr29:40891633-40891522 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 90
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 97, 0

Conread position: 240-352
Cow position: chr29:34483552-34483438 (view UCSC Genome Browser custom track)
Alignm length: 115
Alignm identity: 91
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 242-352
Cow position: chr29:6337727-6337838 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 92
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 94, 69

Conread position: 245-352
Cow position: chr29:6716434-6716325 (view UCSC Genome Browser custom track)
Alignm length: 110
Alignm identity: 90
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 245-353
Cow position: chr29:44937919-44937807 (view UCSC Genome Browser custom track)
Alignm length: 113
Alignm identity: 93
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 254-352
Cow position: chr29:34832309-34832206 (view UCSC Genome Browser custom track)
Alignm length: 104
Alignm identity: 88
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 19, 0

Show alignments to all cow chromosomes.