Cow genome map


           Conread name:
           rpigcf0_010415.y1
        

               Conread position:
               161-352
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               16, 45
               

               Conread position:
               169-352
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               200-351
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               200-351
               

               Cow position:
               
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               15, 125
               

               Conread position:
               206-351
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 68
               

               Conread position:
               206-352
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               207-334
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-337
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               10, 84
               

               Conread position:
               207-343
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               9, 74
               

               Conread position:
               207-344
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 52
               

               Conread position:
               207-347
               

               Cow position:
               
               

               Alignm length:
               143
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               129, 74
               

               Conread position:
               207-349
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               8, 85
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               9, 66
               

               Conread position:
               207-350
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               8, 50
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               11, 35
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 64
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               8, 126
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-351
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               110
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 118
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 116
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               116
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               9, 89
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               120
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               124
               

               Alignm E-value:
               7e-36
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               8, 129
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               8, 125
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               8, 127
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-30
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               116
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               8, 84
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               121
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               8, 40
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-26
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-27
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               11, 115
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 29
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               207-352
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               8, 58
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-31
               

               Alignm gaps (pig, cow):
               8, 36
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               8, 66
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               207-353
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               117
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               8, 70
               

               Conread position:
               208-348
               

               Cow position:
               
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               7, 76
               

               Conread position:
               208-353
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               7, 70
               

               Conread position:
               208-353
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               7, 128
               

               Conread position:
               209-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               209-352
               

               Cow position:
               
               

               Alignm length:
               147
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               209-353
               

               Cow position:
               
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               6, 0
               

               Conread position:
               210-351
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               5, 0
               

               Conread position:
               210-352
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               5, 127
               

               Conread position:
               210-352
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               5, 17
               

               Conread position:
               212-349
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               122, 17
               

               Conread position:
               214-327
               

               Cow position:
               
               

               Alignm length:
               114
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               214-337
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               214-349
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               214-350
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               103
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               122, 0
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               124, 0
               

               Conread position:
               214-352
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               122, 24
               

               Conread position:
               215-351
               

               Cow position:
               
               

               Alignm length:
               141
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               216-351
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               120, 22
               

               Conread position:
               216-351
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               119, 0
               

               Conread position:
               216-352
               

               Cow position:
               
               

               Alignm length:
               139
               

               Alignm identity:
               105
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               219-352
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               113, 66
               

               Conread position:
               219-352
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               106
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               91, 59
               

               Conread position:
               236-333
               

               Cow position:
               
               

               Alignm length:
               98
               

               Alignm identity:
               84
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               236-350
               

               Cow position:
               
               

               Alignm length:
               117
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 27
               

               Conread position:
               236-351
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               95
               

               Alignm E-value:
               6e-24
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               236-352
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               97
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               100, 55
               

               Conread position:
               236-352
               

               Cow position:
               
               

               Alignm length:
               119
               

               Alignm identity:
               93
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               236-353
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               99, 30
               

               Conread position:
               236-353
               

               Cow position:
               
               

               Alignm length:
               120
               

               Alignm identity:
               101
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               100, 0
               

               Conread position:
               238-350
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               97, 0
               

               Conread position:
               240-352
               

               Cow position:
               
               

               Alignm length:
               115
               

               Alignm identity:
               91
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               242-352
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               92
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               94, 69
               

               Conread position:
               245-352
               

               Cow position:
               
               

               Alignm length:
               110
               

               Alignm identity:
               90
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               245-353
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               93
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               254-352
               

               Cow position:
               
               

               Alignm length:
               104
               

               Alignm identity:
               88
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.