Cow genome map

Conread name: rpigcf0_013161.y1

Conread position: 2-410
Cow position:
Alignm length: 429
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 309

Conread position: 4-441
Cow position:
Alignm length: 444
Alignm identity: 305
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 47

Conread position: 4-458
Cow position:
Alignm length: 479
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 97, 39

Conread position: 5-458
Cow position:
Alignm length: 483
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 47

Conread position: 7-454
Cow position:
Alignm length: 474
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 308

Conread position: 7-454
Cow position:
Alignm length: 461
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 121

Conread position: 9-387
Cow position:
Alignm length: 391
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 293

Conread position: 9-456
Cow position:
Alignm length: 469
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 297

Conread position: 9-456
Cow position:
Alignm length: 469
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 156

Conread position: 9-458
Cow position:
Alignm length: 470
Alignm identity: 340
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 297

Conread position: 9-458
Cow position:
Alignm length: 472
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 297

Conread position: 9-458
Cow position:
Alignm length: 469
Alignm identity: 330
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 159

Conread position: 9-458
Cow position:
Alignm length: 467
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 14

Conread position: 9-458
Cow position:
Alignm length: 476
Alignm identity: 350
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 266

Conread position: 9-459
Cow position:
Alignm length: 472
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 79

Conread position: 11-458
Cow position:
Alignm length: 469
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 243

Conread position: 15-456
Cow position:
Alignm length: 463
Alignm identity: 333
Alignm E-value: 0
Alignm gaps (pig, cow): 93, 234

Conread position: 15-457
Cow position:
Alignm length: 465
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 126

Conread position: 15-458
Cow position:
Alignm length: 469
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 89, 26

Conread position: 24-458
Cow position:
Alignm length: 457
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 52, 110

Conread position: 25-458
Cow position:
Alignm length: 454
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 281

Conread position: 35-454
Cow position:
Alignm length: 436
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 81

Conread position: 38-458
Cow position:
Alignm length: 443
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 29

Conread position: 39-455
Cow position:
Alignm length: 439
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 67, 43

Conread position: 51-458
Cow position:
Alignm length: 430
Alignm identity: 322
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 255

Conread position: 55-458
Cow position:
Alignm length: 425
Alignm identity: 316
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 193

Conread position: 106-384
Cow position:
Alignm length: 286
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 231, 58

Conread position: 106-458
Cow position:
Alignm length: 378
Alignm identity: 274
Alignm E-value: 0
Alignm gaps (pig, cow): 160, 10

Conread position: 106-458
Cow position:
Alignm length: 375
Alignm identity: 282
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 201

Conread position: 121-458
Cow position:
Alignm length: 353
Alignm identity: 266
Alignm E-value: 0
Alignm gaps (pig, cow): 207, 181

Conread position: 178-458
Cow position:
Alignm length: 287
Alignm identity: 207
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 208, 25

Conread position: 197-458
Cow position:
Alignm length: 279
Alignm identity: 202
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 142, 81

Conread position: 209-388
Cow position:
Alignm length: 184
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 115, 27

Conread position: 214-437
Cow position:
Alignm length: 239
Alignm identity: 183
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 116, 78

Conread position: 215-449
Cow position:
Alignm length: 255
Alignm identity: 189
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 43, 88

Conread position: 218-386
Cow position:
Alignm length: 176
Alignm identity: 142
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 116, 84

Conread position: 232-458
Cow position:
Alignm length: 238
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 101, 17

Conread position: 234-496
Cow position:
Alignm length: 284
Alignm identity: 206
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 105, 68

Conread position: 236-458
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 94, 44

Show alignments to all cow chromosomes.