Cow genome map
| Conread name: | rpigcf0_013161.y1 |
| Conread position: | 1-387 |
| Cow position: | chr5:37758187-37758582 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 309 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 174 |
| Conread position: | 4-458 |
| Cow position: | chr5:6670530-6670991 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 75 |
| Conread position: | 4-458 |
| Cow position: | chr5:36406795-36406333 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 76 |
| Conread position: | 4-458 |
| Cow position: | chr5:72007250-72007716 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 129 |
| Conread position: | 7-454 |
| Cow position: | chr5:39447911-39448365 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 148 |
| Conread position: | 7-456 |
| Cow position: | chr5:25495762-25496230 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 239 |
| Conread position: | 7-473 |
| Cow position: | chr5:31217735-31217257 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 370 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 19 |
| Conread position: | 8-458 |
| Cow position: | chr5:66338490-66338028 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 124 |
| Conread position: | 9-384 |
| Cow position: | chr5:31635070-31634697 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 95, 164 |
| Conread position: | 9-456 |
| Cow position: | chr5:49522349-49521878 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 283 |
| Conread position: | 9-458 |
| Cow position: | chr5:279534-280003 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 297 |
| Conread position: | 9-458 |
| Cow position: | chr5:2918101-2917639 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 242 |
| Conread position: | 9-458 |
| Cow position: | chr5:7175944-7175475 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 175 |
| Conread position: | 9-458 |
| Cow position: | chr5:29741912-29742384 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 297 |
| Conread position: | 9-458 |
| Cow position: | chr5:49116708-49117174 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 74 |
| Conread position: | 9-458 |
| Cow position: | chr5:54337544-54337079 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 283 |
| Conread position: | 9-458 |
| Cow position: | chr5:55631710-55631241 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 297 |
| Conread position: | 9-496 |
| Cow position: | chr5:4166293-4165766 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 117 |
| Conread position: | 15-458 |
| Cow position: | chr5:5715447-5715909 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 64 |
| Conread position: | 16-458 |
| Cow position: | chr5:24087411-24087873 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 93, 290 |
| Conread position: | 26-458 |
| Cow position: | chr5:32697181-32697615 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 108 |
| Conread position: | 41-458 |
| Cow position: | chr5:10922459-10922022 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 89 |
| Conread position: | 68-456 |
| Cow position: | chr5:39815725-39816125 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 308 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 126 |
| Conread position: | 106-458 |
| Cow position: | chr5:13259117-13258770 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 50 |
| Conread position: | 106-458 |
| Cow position: | chr5:42744329-42743968 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 27 |
| Conread position: | 115-458 |
| Cow position: | chr5:68593969-68593600 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 201 |
| Conread position: | 131-458 |
| Cow position: | chr5:40827852-40828202 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 255 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 24 |
| Conread position: | 179-458 |
| Cow position: | chr5:31917071-31916791 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 211 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 153, 57 |
| Conread position: | 190-399 |
| Cow position: | chr5:20408599-20408815 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 144, 112 |
| Conread position: | 227-458 |
| Cow position: | chr5:8178558-8178311 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 112, 76 |
| Conread position: | 232-458 |
| Cow position: | chr5:46734860-46735100 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 107, 50 |
| Conread position: | 235-418 |
| Cow position: | chr5:33064539-33064722 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 91, 66 |
| Conread position: | 251-458 |
| Cow position: | chr5:47855226-47855004 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 94, 51 |
Show alignments to all cow chromosomes.