Cow genome map
| Conread name: | rpigcf0_013161.y1 |
| Conread position: | 1-458 |
| Cow position: | chrX:33803391-33803842 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 155 |
| Conread position: | 4-441 |
| Cow position: | chrX:11073584-11074027 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 105, 69 |
| Conread position: | 4-458 |
| Cow position: | chrX:19930054-19929588 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 59 |
| Conread position: | 4-479 |
| Cow position: | chrX:40788780-40788270 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 321 |
| Conread position: | 4-496 |
| Cow position: | chrX:27450420-27450938 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 71 |
| Conread position: | 6-456 |
| Cow position: | chrX:23969983-23969509 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 294 |
| Conread position: | 6-458 |
| Cow position: | chrX:16020760-16021223 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 103, 118 |
| Conread position: | 7-387 |
| Cow position: | chrX:11819983-11819598 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 58 |
| Conread position: | 7-458 |
| Cow position: | chrX:27095743-27095282 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 299 |
| Conread position: | 7-496 |
| Cow position: | chrX:5639313-5639811 (view UCSC Genome Browser custom track) |
| Alignm length: | 503 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 102, 299 |
| Conread position: | 8-387 |
| Cow position: | chrX:38007355-38007751 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 304 |
| Conread position: | 8-461 |
| Cow position: | chrX:7805999-7805531 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 193 |
| Conread position: | 9-438 |
| Cow position: | chrX:16853767-16854213 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 262 |
| Conread position: | 9-454 |
| Cow position: | chrX:30143662-30144127 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 297 |
| Conread position: | 9-455 |
| Cow position: | chrX:20954148-20953689 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 63 |
| Conread position: | 9-456 |
| Cow position: | chrX:7573001-7572546 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 49 |
| Conread position: | 9-456 |
| Cow position: | chrX:21592908-21592446 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 51 |
| Conread position: | 9-458 |
| Cow position: | chrX:21227096-21226630 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 198 |
| Conread position: | 9-458 |
| Cow position: | chrX:22811508-22811043 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 150 |
| Conread position: | 9-458 |
| Cow position: | chrX:23451835-23452292 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 330, 38 |
| Conread position: | 9-458 |
| Cow position: | chrX:26531580-26531126 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 13 |
| Conread position: | 9-458 |
| Cow position: | chrX:31202462-31201995 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 100, 124 |
| Conread position: | 9-459 |
| Cow position: | chrX:12179297-12178831 (view UCSC Genome Browser custom track) |
| Alignm length: | 473 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 166 |
| Conread position: | 10-458 |
| Cow position: | chrX:41733575-41734038 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 38 |
| Conread position: | 11-455 |
| Cow position: | chrX:20878142-20878611 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 98, 300 |
| Conread position: | 12-458 |
| Cow position: | chrX:14162810-14162345 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 26 |
| Conread position: | 19-458 |
| Cow position: | chrX:29722824-29722385 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 122 |
| Conread position: | 24-458 |
| Cow position: | chrX:41526903-41527361 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 168 |
| Conread position: | 28-456 |
| Cow position: | chrX:11744869-11744422 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 29-458 |
| Cow position: | chrX:37489331-37488882 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 363 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 283 |
| Conread position: | 30-458 |
| Cow position: | chrX:21583043-21582596 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 268 |
| Conread position: | 51-458 |
| Cow position: | chrX:32584352-32584778 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 170 |
| Conread position: | 57-453 |
| Cow position: | chrX:26441686-26442089 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 191 |
| Conread position: | 146-387 |
| Cow position: | chrX:22870292-22870056 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 193, 44 |
| Conread position: | 152-458 |
| Cow position: | chrX:13178119-13178455 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 163 |
| Conread position: | 179-433 |
| Cow position: | chrX:16517684-16517954 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 196 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 161, 125 |
| Conread position: | 179-458 |
| Cow position: | chrX:2008257-2008545 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 31, 128 |
Show alignments to all cow chromosomes.