Cow genome map

Conread name: rpigcf0_014111.y1

Conread position: 1-223
Cow position: chr21:17459252-17459024 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 104, 0

Conread position: 1-223
Cow position: chr21:17694999-17694766 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 173
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 104, 0

Conread position: 1-223
Cow position: chr21:21971460-21971229 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 178
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 163

Conread position: 1-240
Cow position: chr21:2768036-2767786 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 195
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-245
Cow position: chr21:11312507-11312760 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 77

Conread position: 1-251
Cow position: chr21:34658507-34658765 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 36, 75

Conread position: 1-252
Cow position: chr21:2261213-2260951 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 0

Conread position: 1-252
Cow position: chr21:9863144-9862891 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 169, 35

Conread position: 1-254
Cow position: chr21:26744488-26744225 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-254
Cow position: chr21:29942467-29942734 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 198
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 104, 51

Conread position: 1-254
Cow position: chr21:44826398-44826131 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 196
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 105, 0

Conread position: 1-255
Cow position: chr21:10854055-10854319 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-255
Cow position: chr21:14383685-14383947 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 182
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 112, 56

Conread position: 1-255
Cow position: chr21:16167370-16167104 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 193
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 105, 36

Conread position: 1-255
Cow position: chr21:17207966-17208228 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 74

Conread position: 1-258
Cow position: chr21:8126315-8126050 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 194
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 84, 45

Conread position: 1-258
Cow position: chr21:18601138-18601396 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 191
Alignm E-value: 8e-36
Alignm gaps (pig, cow): 105, 65

Conread position: 1-258
Cow position: chr21:20910634-20910375 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 89

Conread position: 1-258
Cow position: chr21:24697947-24698218 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 196
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 106, 33

Conread position: 1-258
Cow position: chr21:28512011-28512277 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 55

Conread position: 1-258
Cow position: chr21:37923975-37924249 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 105, 225

Conread position: 1-259
Cow position: chr21:149945-150213 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:1196336-1196604 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:2878043-2877775 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:3586101-3585839 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 133

Conread position: 1-259
Cow position: chr21:3782571-3782837 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 89

Conread position: 1-259
Cow position: chr21:5020937-5021205 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:7666587-7666319 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:10045700-10045973 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 112, 223

Conread position: 1-259
Cow position: chr21:10571069-10571337 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:13111328-13111060 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:17144615-17144885 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-259
Cow position: chr21:26399987-26399718 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 1-259
Cow position: chr21:26557582-26557321 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 34, 162

Conread position: 1-259
Cow position: chr21:27375920-27376186 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 93

Conread position: 1-259
Cow position: chr21:27607894-27607626 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:31435826-31436083 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 199
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 172

Conread position: 1-259
Cow position: chr21:31512473-31512204 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 68, 0

Conread position: 1-259
Cow position: chr21:33316567-33316298 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 0

Conread position: 1-259
Cow position: chr21:33832178-33831907 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-259
Cow position: chr21:34301379-34301643 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 61

Conread position: 1-259
Cow position: chr21:42443138-42442870 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 0

Conread position: 1-259
Cow position: chr21:45842204-45841936 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 199
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 103, 227

Conread position: 1-259
Cow position: chr21:47140223-47139956 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 105, 77

Conread position: 1-259
Cow position: chr21:48459399-48459131 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 32

Conread position: 1-260
Cow position: chr21:471088-471369 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 38, 0

Conread position: 1-260
Cow position: chr21:2927763-2927496 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 146

Conread position: 1-260
Cow position: chr21:4279106-4279372 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 33

Conread position: 1-260
Cow position: chr21:4282394-4282126 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 84

Conread position: 1-260
Cow position: chr21:5237877-5238144 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 48

Conread position: 1-260
Cow position: chr21:5595135-5595402 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 1-260
Cow position: chr21:6623619-6623886 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 106, 35

Conread position: 1-260
Cow position: chr21:6765220-6764964 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 105, 51

Conread position: 1-260
Cow position: chr21:8071300-8071039 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 186
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 100, 48

Conread position: 1-260
Cow position: chr21:21000585-21000312 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 183
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 104, 36

Conread position: 1-260
Cow position: chr21:24297304-24297025 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 208
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 34, 0

Conread position: 1-260
Cow position: chr21:25472971-25473240 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-260
Cow position: chr21:30151155-30150880 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 205
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 104, 60

Conread position: 1-260
Cow position: chr21:33420247-33419978 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 88, 48

Conread position: 1-260
Cow position: chr21:37298939-37299203 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 200
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 104, 42

Conread position: 1-260
Cow position: chr21:37322826-37322554 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 188
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 104, 0

Conread position: 1-260
Cow position: chr21:48638272-48638008 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 71

Conread position: 1-268
Cow position: chr21:168173-167899 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 206
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 103, 33

Conread position: 1-268
Cow position: chr21:451679-451950 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 21

Conread position: 1-268
Cow position: chr21:750207-750484 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:1058270-1058550 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 211
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 105, 93

Conread position: 1-268
Cow position: chr21:2514646-2514920 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 196
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 42

Conread position: 1-268
Cow position: chr21:3496707-3496431 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 156

Conread position: 1-268
Cow position: chr21:3923710-3923988 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:4559274-4558999 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-268
Cow position: chr21:4585878-4585603 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 98

Conread position: 1-268
Cow position: chr21:4732745-4732471 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 83

Conread position: 1-268
Cow position: chr21:4898174-4897907 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 192
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 105, 151

Conread position: 1-268
Cow position: chr21:4905498-4905221 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 9

Conread position: 1-268
Cow position: chr21:5642038-5641762 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 35

Conread position: 1-268
Cow position: chr21:5857667-5857390 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 107, 0

Conread position: 1-268
Cow position: chr21:10436639-10436915 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 201

Conread position: 1-268
Cow position: chr21:11509738-11510012 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 112, 48

Conread position: 1-268
Cow position: chr21:13735363-13735086 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:13897660-13897939 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 202
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 104, 20

Conread position: 1-268
Cow position: chr21:16890045-16889768 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:18979386-18979109 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-268
Cow position: chr21:19351062-19350786 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 108, 146

Conread position: 1-268
Cow position: chr21:19436934-19436652 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 195
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 104, 157

Conread position: 1-268
Cow position: chr21:19614043-19614319 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:19626911-19626634 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:20588500-20588777 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-268
Cow position: chr21:22719303-22719034 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 89

Conread position: 1-268
Cow position: chr21:22856648-22856925 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 46, 0

Conread position: 1-268
Cow position: chr21:24111155-24110882 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 34, 108

Conread position: 1-268
Cow position: chr21:24796557-24796288 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 209
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 18, 104

Conread position: 1-268
Cow position: chr21:26628566-26628843 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 218

Conread position: 1-268
Cow position: chr21:26835824-26835549 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 202
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 104, 146

Conread position: 1-268
Cow position: chr21:26875390-26875667 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 218

Conread position: 1-268
Cow position: chr21:27124922-27124661 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 166

Conread position: 1-268
Cow position: chr21:27619721-27619444 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 204
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 105, 218

Conread position: 1-268
Cow position: chr21:28210655-28210931 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 216
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-268
Cow position: chr21:28477094-28477371 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-268
Cow position: chr21:28617075-28617348 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 64

Conread position: 1-268
Cow position: chr21:28768966-28768690 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 75

Conread position: 1-268
Cow position: chr21:29069846-29069582 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 200
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 104, 32

Conread position: 1-268
Cow position: chr21:29214686-29214409 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 55

Conread position: 1-268
Cow position: chr21:30571281-30571004 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:30966144-30965866 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 223

Conread position: 1-268
Cow position: chr21:31252797-31253073 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 140

Conread position: 1-268
Cow position: chr21:31690965-31691227 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 176

Conread position: 1-268
Cow position: chr21:33209670-33209945 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 79, 42

Conread position: 1-268
Cow position: chr21:33728905-33729179 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 205
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 104, 87

Conread position: 1-268
Cow position: chr21:33983338-33983064 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 105, 32

Conread position: 1-268
Cow position: chr21:34074436-34074713 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 215
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 218

Conread position: 1-268
Cow position: chr21:34254810-34254534 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 226

Conread position: 1-268
Cow position: chr21:36163490-36163217 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 222

Conread position: 1-268
Cow position: chr21:36780924-36781201 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:37517896-37517619 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 204
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 34, 147

Conread position: 1-268
Cow position: chr21:39508171-39507891 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 205
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 107, 0

Conread position: 1-268
Cow position: chr21:42464366-42464095 (view UCSC Genome Browser custom track)
Alignm length: 282
Alignm identity: 198
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 172, 74

Conread position: 1-268
Cow position: chr21:42917592-42917869 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 0

Conread position: 1-268
Cow position: chr21:44657790-44658064 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 45

Conread position: 1-268
Cow position: chr21:47429139-47429416 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 105, 0

Conread position: 1-268
Cow position: chr21:47532500-47532788 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 220
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 0

Conread position: 1-268
Cow position: chr21:48530970-48531256 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 208
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 34, 227

Conread position: 1-271
Cow position: chr21:4812543-4812255 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 35, 0

Conread position: 1-271
Cow position: chr21:12153611-12153882 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 110, 38

Conread position: 1-271
Cow position: chr21:24130563-24130835 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 42

Conread position: 1-273
Cow position: chr21:30354647-30354923 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 188
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 105, 118

Conread position: 1-287
Cow position: chr21:23606141-23606440 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 219
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 104, 33

Conread position: 1-289
Cow position: chr21:13752084-13752380 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 201
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 113, 24

Conread position: 1-289
Cow position: chr21:19957701-19957998 (view UCSC Genome Browser custom track)
Alignm length: 300
Alignm identity: 223
Alignm E-value: 0
Alignm gaps (pig, cow): 34, 49

Conread position: 1-289
Cow position: chr21:20262867-20262566 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 225
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 1-310
Cow position: chr21:29484434-29484736 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 104, 176

Conread position: 1-312
Cow position: chr21:18289133-18289451 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 239
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 1-312
Cow position: chr21:34738064-34738388 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 236
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 105, 6

Conread position: 1-320
Cow position: chr21:38450213-38449884 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 242
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 296

Conread position: 1-332
Cow position: chr21:20575988-20575646 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 231
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 104, 46

Conread position: 2-223
Cow position: chr21:18939916-18939685 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 172
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 103, 163

Conread position: 2-258
Cow position: chr21:29855144-29855410 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-259
Cow position: chr21:42558574-42558841 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 204
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 215

Conread position: 2-259
Cow position: chr21:47649141-47649405 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 203
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 26, 42

Conread position: 2-260
Cow position: chr21:3765968-3765702 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 201
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 81, 216

Conread position: 2-260
Cow position: chr21:18828865-18828599 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 192
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 103, 89

Conread position: 2-260
Cow position: chr21:19051015-19050749 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 184
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 132

Conread position: 2-260
Cow position: chr21:21103518-21103786 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 217

Conread position: 2-260
Cow position: chr21:23341451-23341719 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-260
Cow position: chr21:43266693-43266425 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-260
Cow position: chr21:47978067-47978335 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-267
Cow position: chr21:3047135-3047409 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 109, 96

Conread position: 2-267
Cow position: chr21:27864050-27863774 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 2-268
Cow position: chr21:1752189-1752466 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 2-268
Cow position: chr21:2472976-2472701 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 204
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 104, 81

Conread position: 2-268
Cow position: chr21:7038393-7038117 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 203
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:7524917-7525193 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:7597471-7597195 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:10075464-10075190 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:10756711-10756987 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:11144050-11143774 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:11292506-11292784 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 219

Conread position: 2-268
Cow position: chr21:12365853-12366133 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 207
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 33, 0

Conread position: 2-268
Cow position: chr21:16575647-16575371 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:18574314-18574590 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 217

Conread position: 2-268
Cow position: chr21:21216667-21216395 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 203
Alignm E-value: 4.99983e-42
Alignm gaps (pig, cow): 103, 36

Conread position: 2-268
Cow position: chr21:21623884-21624160 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:21908111-21907833 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 217
Alignm E-value: 0
Alignm gaps (pig, cow): 64, 0

Conread position: 2-268
Cow position: chr21:21909825-21910101 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:25480071-25480335 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 196
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 109, 156

Conread position: 2-268
Cow position: chr21:25598464-25598740 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 215

Conread position: 2-268
Cow position: chr21:25738400-25738131 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 203
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 171, 96

Conread position: 2-268
Cow position: chr21:26756923-26756649 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:26854893-26854617 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:29423858-29424135 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:30655439-30655715 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:31950213-31950489 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:33107694-33107418 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 212
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:33709700-33709424 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 210
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:33770477-33770753 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-268
Cow position: chr21:34181465-34181741 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 208
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 221

Conread position: 2-268
Cow position: chr21:40479061-40479337 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 220

Conread position: 2-268
Cow position: chr21:41795925-41795648 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 222

Conread position: 2-268
Cow position: chr21:44861792-44861509 (view UCSC Genome Browser custom track)
Alignm length: 284
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 2-363
Cow position: chr21:32359095-32358723 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 241
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 0

Conread position: 3-254
Cow position: chr21:363124-363387 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 198
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 102, 0

Conread position: 3-254
Cow position: chr21:38900246-38900513 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 0

Conread position: 3-258
Cow position: chr21:22334670-22334936 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 185
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 102, 30

Conread position: 3-259
Cow position: chr21:44761881-44761619 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 102, 47

Conread position: 3-260
Cow position: chr21:10000811-10000551 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 211
Alignm E-value: 0
Alignm gaps (pig, cow): 102, 68

Conread position: 3-260
Cow position: chr21:13300614-13300890 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 209
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 24, 0

Conread position: 3-260
Cow position: chr21:45781937-45781668 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 182
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 6, 0

Conread position: 3-268
Cow position: chr21:12802312-12802035 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 0

Conread position: 3-268
Cow position: chr21:15584929-15584653 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 222
Alignm E-value: 0
Alignm gaps (pig, cow): 103, 138

Conread position: 3-268
Cow position: chr21:39429421-39429694 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 197
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 110, 30

Conread position: 4-259
Cow position: chr21:2293381-2293125 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 201
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 101, 49

Conread position: 4-260
Cow position: chr21:4189317-4189570 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 199
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 101, 35

Conread position: 4-260
Cow position: chr21:16278199-16278449 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 213
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 57

Conread position: 4-268
Cow position: chr21:26859-27123 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 195
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 146, 42

Conread position: 4-268
Cow position: chr21:31783-32056 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 209

Conread position: 4-289
Cow position: chr21:20109793-20109494 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 201
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 72, 29

Conread position: 5-255
Cow position: chr21:44073935-44074185 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 67

Conread position: 5-258
Cow position: chr21:44804780-44804524 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 181
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 116, 42

Conread position: 5-260
Cow position: chr21:446530-446801 (view UCSC Genome Browser custom track)
Alignm length: 272
Alignm identity: 190
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 100, 0

Conread position: 5-260
Cow position: chr21:46132522-46132257 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 100, 12

Conread position: 5-268
Cow position: chr21:34684826-34685096 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 215

Conread position: 5-268
Cow position: chr21:34900478-34900751 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 207
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 218

Conread position: 5-268
Cow position: chr21:35437872-35437604 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 206
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 22

Conread position: 5-289
Cow position: chr21:1463708-1464001 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 219
Alignm E-value: 0
Alignm gaps (pig, cow): 101, 55

Conread position: 6-268
Cow position: chr21:13070390-13070114 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 204
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 100, 148

Conread position: 7-251
Cow position: chr21:18784280-18784028 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 186
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 99, 151

Conread position: 7-267
Cow position: chr21:27147747-27147479 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 202
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 120

Conread position: 7-268
Cow position: chr21:22100395-22100124 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 99, 210

Conread position: 7-268
Cow position: chr21:34899878-34899608 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 196
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 99, 67

Conread position: 7-285
Cow position: chr21:28625584-28625869 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 214
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 273

Conread position: 8-223
Cow position: chr21:18850925-18850693 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 0

Conread position: 8-260
Cow position: chr21:12325524-12325777 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 179
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 156, 95

Conread position: 8-268
Cow position: chr21:47949-48221 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 200
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 98, 0

Conread position: 8-268
Cow position: chr21:23329537-23329266 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 205
Alignm E-value: 0
Alignm gaps (pig, cow): 98, 216

Conread position: 10-260
Cow position: chr21:34391486-34391228 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 198
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 22

Conread position: 10-260
Cow position: chr21:44219707-44219973 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 193
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 95, 0

Conread position: 10-268
Cow position: chr21:28026604-28026872 (view UCSC Genome Browser custom track)
Alignm length: 270
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 105

Conread position: 10-268
Cow position: chr21:31948370-31948638 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 203
Alignm E-value: 0
Alignm gaps (pig, cow): 96, 0

Conread position: 10-268
Cow position: chr21:44122533-44122801 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 201
Alignm E-value: 0
Alignm gaps (pig, cow): 95, 0

Conread position: 11-267
Cow position: chr21:32560159-32559893 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 206
Alignm E-value: 0
Alignm gaps (pig, cow): 94, 0

Conread position: 11-268
Cow position: chr21:7047376-7047111 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 198
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 95, 122

Conread position: 12-259
Cow position: chr21:21785612-21785350 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 192
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 24, 72

Conread position: 12-268
Cow position: chr21:28428942-28429196 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 193
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 94, 108

Conread position: 15-258
Cow position: chr21:18846340-18846088 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 185
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 239

Conread position: 17-267
Cow position: chr21:3920727-3920467 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 192
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 89, 0

Conread position: 19-267
Cow position: chr21:37352924-37352673 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 65

Conread position: 19-268
Cow position: chr21:18818843-18818583 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 190
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 86, 71

Conread position: 21-268
Cow position: chr21:19237207-19237464 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 194
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 0

Conread position: 21-268
Cow position: chr21:32814325-32814063 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 183
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 14

Conread position: 22-268
Cow position: chr21:4998993-4998739 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 197
Alignm E-value: 0
Alignm gaps (pig, cow): 84, 38

Conread position: 24-260
Cow position: chr21:14293877-14293630 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 103

Conread position: 25-248
Cow position: chr21:6063576-6063809 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 171
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 81, 0

Conread position: 25-268
Cow position: chr21:20370188-20370441 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 190
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 81, 198

Conread position: 25-268
Cow position: chr21:29954713-29954966 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 191
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 81, 0

Conread position: 27-260
Cow position: chr21:47823777-47823529 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 78, 0

Conread position: 28-258
Cow position: chr21:43810-44053 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 42, 9

Conread position: 28-259
Cow position: chr21:1780850-1781090 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 178
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 77, 119

Conread position: 28-268
Cow position: chr21:10516286-10516040 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 77, 190

Conread position: 28-289
Cow position: chr21:22464285-22464558 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 200
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 77, 0

Conread position: 30-268
Cow position: chr21:11353321-11353568 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 183
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 76, 42

Conread position: 31-268
Cow position: chr21:2871216-2870970 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 75, 47

Conread position: 33-254
Cow position: chr21:44671256-44671485 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 166
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 73, 45

Conread position: 33-268
Cow position: chr21:33901257-33901502 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 184
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 73, 190

Conread position: 34-260
Cow position: chr21:36756110-36756353 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 176
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 34-268
Cow position: chr21:23603653-23603889 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 180
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 139, 71

Conread position: 36-260
Cow position: chr21:4722933-4723169 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 160
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 65, 0

Conread position: 36-268
Cow position: chr21:31276231-31276467 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 70, 39

Conread position: 36-268
Cow position: chr21:34909697-34909937 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 183
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 70, 42

Conread position: 36-268
Cow position: chr21:38848966-38848724 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 182
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 70, 187

Conread position: 38-268
Cow position: chr21:4473512-4473274 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 179
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 68, 177

Conread position: 40-289
Cow position: chr21:36909325-36909588 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 200
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 65, 250

Conread position: 41-260
Cow position: chr21:15742593-15742359 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 170
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 64, 25

Conread position: 41-268
Cow position: chr21:4079868-4080100 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 179
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 64, 45

Conread position: 44-260
Cow position: chr21:27743253-27743479 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 162
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 61, 0

Conread position: 44-270
Cow position: chr21:2810602-2810366 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 176
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 50, 200

Conread position: 45-260
Cow position: chr21:39404054-39403830 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 61, 23

Conread position: 48-255
Cow position: chr21:912445-912228 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 172
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 63, 100

Conread position: 51-255
Cow position: chr21:34252014-34251800 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 54, 0

Conread position: 56-269
Cow position: chr21:684012-684226 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 162
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 49, 166

Conread position: 57-268
Cow position: chr21:612241-612021 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 48, 15

Conread position: 59-289
Cow position: chr21:20925978-20925738 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 177
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 46, 0

Conread position: 66-260
Cow position: chr21:29015628-29015421 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 66-268
Cow position: chr21:5649441-5649652 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 155
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 39, 68

Conread position: 67-268
Cow position: chr21:10514347-10514558 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 15, 62

Conread position: 67-286
Cow position: chr21:642881-643102 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 169
Alignm E-value: 4e-39
Alignm gaps (pig, cow): 39, 122

Conread position: 68-251
Cow position: chr21:29955712-29955519 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 71-268
Cow position: chr21:13257209-13257416 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 150
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 35, 148

Conread position: 74-268
Cow position: chr21:46912085-46912290 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 146
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 32, 161

Conread position: 79-268
Cow position: chr21:297270-297469 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 142
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 26, 0

Conread position: 80-260
Cow position: chr21:37706866-37706679 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 25, 52

Conread position: 88-268
Cow position: chr21:13632446-13632635 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 18, 0

Conread position: 93-259
Cow position: chr21:30000021-29999844 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 12, 0

Conread position: 95-260
Cow position: chr21:2657158-2657329 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 123
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 0

Conread position: 103-268
Cow position: chr21:393595-393767 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 99

Conread position: 109-268
Cow position: chr21:7717208-7717042 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 133

Conread position: 110-268
Cow position: chr21:11195713-11195877 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 64, 103

Conread position: 111-260
Cow position: chr21:1179355-1179198 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 111-270
Cow position: chr21:24222958-24222793 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 51, 0

Conread position: 114-268
Cow position: chr21:33933800-33933638 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 122-271
Cow position: chr21:16909658-16909804 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 0

Conread position: 126-289
Cow position: chr21:25382594-25382766 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 7e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 136-268
Cow position: chr21:40244040-40244180 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 108
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 0

Show alignments to all cow chromosomes.