Cow genome map
Conread name: | rpigcf0_016341.y1 |
Conread position: | 228-467 |
Cow position: | chr1:15028587-15028342 (view UCSC Genome Browser custom track) |
Alignm length: | 251 |
Alignm identity: | 173 |
Alignm E-value: | 2e-23 |
Alignm gaps (pig, cow): | 138, 47 |
Conread position: | 231-466 |
Cow position: | chr1:85028860-85028627 (view UCSC Genome Browser custom track) |
Alignm length: | 239 |
Alignm identity: | 177 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 165, 14 |
Conread position: | 232-383 |
Cow position: | chr1:93528597-93528442 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 120 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 48, 41 |
Conread position: | 232-461 |
Cow position: | chr1:3035092-3035319 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 177 |
Alignm E-value: | 1e-38 |
Alignm gaps (pig, cow): | 131, 13 |
Conread position: | 232-465 |
Cow position: | chr1:52039537-52039304 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 196 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 13 |
Conread position: | 232-466 |
Cow position: | chr1:31348539-31348766 (view UCSC Genome Browser custom track) |
Alignm length: | 235 |
Alignm identity: | 175 |
Alignm E-value: | 3e-39 |
Alignm gaps (pig, cow): | 14, 0 |
Conread position: | 232-466 |
Cow position: | chr1:52753262-52753500 (view UCSC Genome Browser custom track) |
Alignm length: | 240 |
Alignm identity: | 200 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 11, 43 |
Conread position: | 232-466 |
Cow position: | chr1:55357384-55357614 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 174 |
Alignm E-value: | 2e-36 |
Alignm gaps (pig, cow): | 154, 14 |
Conread position: | 234-364 |
Cow position: | chr1:62996393-62996266 (view UCSC Genome Browser custom track) |
Alignm length: | 131 |
Alignm identity: | 106 |
Alignm E-value: | 8e-27 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 234-377 |
Cow position: | chr1:25281777-25281918 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 115 |
Alignm E-value: | 9e-28 |
Alignm gaps (pig, cow): | 136, 11 |
Conread position: | 234-464 |
Cow position: | chr1:67821312-67821550 (view UCSC Genome Browser custom track) |
Alignm length: | 243 |
Alignm identity: | 188 |
Alignm E-value: | 5.00264e-43 |
Alignm gaps (pig, cow): | 133, 11 |
Conread position: | 234-466 |
Cow position: | chr1:37309614-37309844 (view UCSC Genome Browser custom track) |
Alignm length: | 237 |
Alignm identity: | 179 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 152, 12 |
Conread position: | 234-467 |
Cow position: | chr1:44769212-44769444 (view UCSC Genome Browser custom track) |
Alignm length: | 236 |
Alignm identity: | 176 |
Alignm E-value: | 4.00001e-41 |
Alignm gaps (pig, cow): | 149, 49 |
Conread position: | 236-338 |
Cow position: | chr1:28563670-28563771 (view UCSC Genome Browser custom track) |
Alignm length: | 103 |
Alignm identity: | 85 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 38, 0 |
Conread position: | 236-393 |
Cow position: | chr1:4291057-4290900 (view UCSC Genome Browser custom track) |
Alignm length: | 159 |
Alignm identity: | 119 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 137, 38 |
Conread position: | 236-434 |
Cow position: | chr1:71748107-71748306 (view UCSC Genome Browser custom track) |
Alignm length: | 202 |
Alignm identity: | 162 |
Alignm E-value: | 5.04467e-44 |
Alignm gaps (pig, cow): | 7, 39 |
Conread position: | 236-461 |
Cow position: | chr1:67577966-67577736 (view UCSC Genome Browser custom track) |
Alignm length: | 233 |
Alignm identity: | 173 |
Alignm E-value: | 3e-37 |
Alignm gaps (pig, cow): | 45, 10 |
Conread position: | 236-462 |
Cow position: | chr1:11913980-11914202 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 170 |
Alignm E-value: | 9.99995e-41 |
Alignm gaps (pig, cow): | 10, 0 |
Conread position: | 236-466 |
Cow position: | chr1:54199485-54199714 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 191 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 171, 38 |
Conread position: | 237-466 |
Cow position: | chr1:3929962-3930193 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 168 |
Alignm E-value: | 2e-34 |
Alignm gaps (pig, cow): | 123, 9 |
Conread position: | 237-466 |
Cow position: | chr1:12222708-12222939 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 180 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 133, 9 |
Conread position: | 237-466 |
Cow position: | chr1:30373049-30372818 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 123, 9 |
Conread position: | 237-466 |
Cow position: | chr1:94665143-94664917 (view UCSC Genome Browser custom track) |
Alignm length: | 234 |
Alignm identity: | 167 |
Alignm E-value: | 1e-29 |
Alignm gaps (pig, cow): | 123, 9 |
Conread position: | 238-438 |
Cow position: | chr1:68845589-68845786 (view UCSC Genome Browser custom track) |
Alignm length: | 204 |
Alignm identity: | 153 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 151, 36 |
Conread position: | 239-394 |
Cow position: | chr1:52510347-52510502 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 124 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 124, 35 |
Conread position: | 239-466 |
Cow position: | chr1:43380132-43380357 (view UCSC Genome Browser custom track) |
Alignm length: | 230 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 78, 35 |
Conread position: | 239-467 |
Cow position: | chr1:52435166-52434948 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 171 |
Alignm E-value: | 5e-32 |
Alignm gaps (pig, cow): | 130, 35 |
Conread position: | 240-409 |
Cow position: | chr1:99637884-99638054 (view UCSC Genome Browser custom track) |
Alignm length: | 172 |
Alignm identity: | 125 |
Alignm E-value: | 7e-25 |
Alignm gaps (pig, cow): | 41, 51 |
Conread position: | 240-466 |
Cow position: | chr1:1802034-1801813 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 174 |
Alignm E-value: | 5.60519e-45 |
Alignm gaps (pig, cow): | 34, 0 |
Conread position: | 240-466 |
Cow position: | chr1:55260535-55260764 (view UCSC Genome Browser custom track) |
Alignm length: | 232 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 45 |
Conread position: | 244-404 |
Cow position: | chr1:78030591-78030752 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 125 |
Alignm E-value: | 3e-29 |
Alignm gaps (pig, cow): | 77, 30 |
Conread position: | 246-364 |
Cow position: | chr1:51445768-51445651 (view UCSC Genome Browser custom track) |
Alignm length: | 119 |
Alignm identity: | 98 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 246-393 |
Cow position: | chr1:3923906-3924051 (view UCSC Genome Browser custom track) |
Alignm length: | 149 |
Alignm identity: | 120 |
Alignm E-value: | 4e-30 |
Alignm gaps (pig, cow): | 124, 28 |
Conread position: | 246-450 |
Cow position: | chr1:49839396-49839204 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 156 |
Alignm E-value: | 2e-33 |
Alignm gaps (pig, cow): | 28, 0 |
Conread position: | 246-465 |
Cow position: | chr1:22467819-22467595 (view UCSC Genome Browser custom track) |
Alignm length: | 226 |
Alignm identity: | 184 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 28 |
Conread position: | 246-466 |
Cow position: | chr1:5623660-5623883 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 159 |
Alignm E-value: | 4e-31 |
Alignm gaps (pig, cow): | 114, 28 |
Conread position: | 246-466 |
Cow position: | chr1:43352768-43352983 (view UCSC Genome Browser custom track) |
Alignm length: | 225 |
Alignm identity: | 170 |
Alignm E-value: | 2e-35 |
Alignm gaps (pig, cow): | 13, 8 |
Conread position: | 246-466 |
Cow position: | chr1:81355817-81356037 (view UCSC Genome Browser custom track) |
Alignm length: | 224 |
Alignm identity: | 183 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 159, 27 |
Conread position: | 246-467 |
Cow position: | chr1:96964208-96963984 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 182 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 120, 9 |
Conread position: | 247-453 |
Cow position: | chr1:80988234-80988028 (view UCSC Genome Browser custom track) |
Alignm length: | 208 |
Alignm identity: | 168 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 123, 27 |
Conread position: | 254-466 |
Cow position: | chr1:101792217-101792430 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 175 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 115, 20 |
Conread position: | 260-447 |
Cow position: | chr1:21577679-21577492 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 145 |
Alignm E-value: | 8e-37 |
Alignm gaps (pig, cow): | 141, 11 |
Conread position: | 273-466 |
Cow position: | chr1:26186604-26186801 (view UCSC Genome Browser custom track) |
Alignm length: | 199 |
Alignm identity: | 140 |
Alignm E-value: | 2e-24 |
Alignm gaps (pig, cow): | 81, 73 |
Show alignments to all cow chromosomes.