Cow genome map

Conread name: rpigcf0_016341.y1

Conread position: 228-467
Cow position: chr1:15028587-15028342 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 173
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 138, 47

Conread position: 231-466
Cow position: chr1:85028860-85028627 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 177
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 165, 14

Conread position: 232-383
Cow position: chr1:93528597-93528442 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 41

Conread position: 232-461
Cow position: chr1:3035092-3035319 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 177
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 131, 13

Conread position: 232-465
Cow position: chr1:52039537-52039304 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 196
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 13

Conread position: 232-466
Cow position: chr1:31348539-31348766 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 175
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 14, 0

Conread position: 232-466
Cow position: chr1:52753262-52753500 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 200
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 43

Conread position: 232-466
Cow position: chr1:55357384-55357614 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 174
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 154, 14

Conread position: 234-364
Cow position: chr1:62996393-62996266 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 106
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 234-377
Cow position: chr1:25281777-25281918 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 136, 11

Conread position: 234-464
Cow position: chr1:67821312-67821550 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 188
Alignm E-value: 5.00264e-43
Alignm gaps (pig, cow): 133, 11

Conread position: 234-466
Cow position: chr1:37309614-37309844 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 179
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 152, 12

Conread position: 234-467
Cow position: chr1:44769212-44769444 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 176
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 149, 49

Conread position: 236-338
Cow position: chr1:28563670-28563771 (view UCSC Genome Browser custom track)
Alignm length: 103
Alignm identity: 85
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 38, 0

Conread position: 236-393
Cow position: chr1:4291057-4290900 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 137, 38

Conread position: 236-434
Cow position: chr1:71748107-71748306 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 162
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 7, 39

Conread position: 236-461
Cow position: chr1:67577966-67577736 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 173
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 45, 10

Conread position: 236-462
Cow position: chr1:11913980-11914202 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 170
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 10, 0

Conread position: 236-466
Cow position: chr1:54199485-54199714 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 191
Alignm E-value: 0
Alignm gaps (pig, cow): 171, 38

Conread position: 237-466
Cow position: chr1:3929962-3930193 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 168
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 123, 9

Conread position: 237-466
Cow position: chr1:12222708-12222939 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 180
Alignm E-value: 0
Alignm gaps (pig, cow): 133, 9

Conread position: 237-466
Cow position: chr1:30373049-30372818 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 123, 9

Conread position: 237-466
Cow position: chr1:94665143-94664917 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 123, 9

Conread position: 238-438
Cow position: chr1:68845589-68845786 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 151, 36

Conread position: 239-394
Cow position: chr1:52510347-52510502 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 124, 35

Conread position: 239-466
Cow position: chr1:43380132-43380357 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 35

Conread position: 239-467
Cow position: chr1:52435166-52434948 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 171
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 130, 35

Conread position: 240-409
Cow position: chr1:99637884-99638054 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 125
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 41, 51

Conread position: 240-466
Cow position: chr1:1802034-1801813 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 174
Alignm E-value: 5.60519e-45
Alignm gaps (pig, cow): 34, 0

Conread position: 240-466
Cow position: chr1:55260535-55260764 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 185
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 45

Conread position: 244-404
Cow position: chr1:78030591-78030752 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 77, 30

Conread position: 246-364
Cow position: chr1:51445768-51445651 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 98
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 28, 0

Conread position: 246-393
Cow position: chr1:3923906-3924051 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 120
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 124, 28

Conread position: 246-450
Cow position: chr1:49839396-49839204 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 156
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 28, 0

Conread position: 246-465
Cow position: chr1:22467819-22467595 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 184
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 28

Conread position: 246-466
Cow position: chr1:5623660-5623883 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 159
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 114, 28

Conread position: 246-466
Cow position: chr1:43352768-43352983 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 170
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 13, 8

Conread position: 246-466
Cow position: chr1:81355817-81356037 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 183
Alignm E-value: 0
Alignm gaps (pig, cow): 159, 27

Conread position: 246-467
Cow position: chr1:96964208-96963984 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 182
Alignm E-value: 0
Alignm gaps (pig, cow): 120, 9

Conread position: 247-453
Cow position: chr1:80988234-80988028 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 168
Alignm E-value: 0
Alignm gaps (pig, cow): 123, 27

Conread position: 254-466
Cow position: chr1:101792217-101792430 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 175
Alignm E-value: 0
Alignm gaps (pig, cow): 115, 20

Conread position: 260-447
Cow position: chr1:21577679-21577492 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 145
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 141, 11

Conread position: 273-466
Cow position: chr1:26186604-26186801 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 140
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 73

Show alignments to all cow chromosomes.