Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 206-466 |
| Cow position: | chr10:44765881-44765624 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 14, 26 |
| Conread position: | 232-464 |
| Cow position: | chr10:37528734-37528970 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 15 |
| Conread position: | 232-466 |
| Cow position: | chr10:32093674-32093428 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 133, 14 |
| Conread position: | 232-466 |
| Cow position: | chr10:41737179-41736941 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 185 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 232-466 |
| Cow position: | chr10:60960811-60960575 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 166, 14 |
| Conread position: | 234-386 |
| Cow position: | chr10:13765296-13765445 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 234-386 |
| Cow position: | chr10:45370923-45370776 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 234-472 |
| Cow position: | chr10:55733731-55733970 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 11 |
| Conread position: | 236-365 |
| Cow position: | chr10:59151997-59152123 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 71, 37 |
| Conread position: | 236-381 |
| Cow position: | chr10:2449220-2449075 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 131, 18 |
| Conread position: | 236-391 |
| Cow position: | chr10:37444353-37444503 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 135, 30 |
| Conread position: | 236-392 |
| Cow position: | chr10:23912628-23912784 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 129, 38 |
| Conread position: | 236-393 |
| Cow position: | chr10:20505406-20505253 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 236-394 |
| Cow position: | chr10:48259364-48259520 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-409 |
| Cow position: | chr10:30914366-30914192 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-411 |
| Cow position: | chr10:54936243-54936418 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-413 |
| Cow position: | chr10:19402802-19402625 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 167, 13 |
| Conread position: | 236-444 |
| Cow position: | chr10:2304512-2304711 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 33, 9 |
| Conread position: | 236-466 |
| Cow position: | chr10:5607510-5607283 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 236-466 |
| Cow position: | chr10:18042051-18041814 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 199 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 9 |
| Conread position: | 236-466 |
| Cow position: | chr10:23886578-23886810 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 41 |
| Conread position: | 236-466 |
| Cow position: | chr10:33891220-33891443 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 7, 29 |
| Conread position: | 236-466 |
| Cow position: | chr10:52569461-52569230 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-477 |
| Cow position: | chr10:43683596-43683351 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 28, 10 |
| Conread position: | 237-392 |
| Cow position: | chr10:24916126-24916281 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 9 |
| Conread position: | 237-394 |
| Cow position: | chr10:34554221-34554378 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 123, 37 |
| Conread position: | 237-466 |
| Cow position: | chr10:11217480-11217248 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 132, 9 |
| Conread position: | 237-466 |
| Cow position: | chr10:19104305-19104547 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 187 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 58, 36 |
| Conread position: | 237-466 |
| Cow position: | chr10:25006436-25006205 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 9 |
| Conread position: | 237-467 |
| Cow position: | chr10:10859364-10859596 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 133, 9 |
| Conread position: | 238-405 |
| Cow position: | chr10:19094511-19094347 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 120, 9 |
| Conread position: | 238-466 |
| Cow position: | chr10:46801137-46801364 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 58, 31 |
| Conread position: | 239-364 |
| Cow position: | chr10:59141293-59141169 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 239-365 |
| Cow position: | chr10:65071176-65071051 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 102 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 48, 35 |
| Conread position: | 239-388 |
| Cow position: | chr10:24753018-24752874 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 239-465 |
| Cow position: | chr10:4311054-4310827 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 36 |
| Conread position: | 239-465 |
| Cow position: | chr10:27716976-27717202 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 122, 35 |
| Conread position: | 241-464 |
| Cow position: | chr10:12875918-12876144 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 39, 32 |
| Conread position: | 242-364 |
| Cow position: | chr10:48388405-48388530 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 104, 33 |
| Conread position: | 246-369 |
| Cow position: | chr10:29588982-29589104 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 106, 28 |
| Conread position: | 246-384 |
| Cow position: | chr10:39646245-39646384 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 17, 29 |
| Conread position: | 246-466 |
| Cow position: | chr10:19895257-19895035 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 28 |
| Conread position: | 246-466 |
| Cow position: | chr10:47158965-47158741 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 28 |
| Conread position: | 246-466 |
| Cow position: | chr10:69934919-69935139 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 254-466 |
| Cow position: | chr10:40256376-40256170 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 149, 20 |
| Conread position: | 254-466 |
| Cow position: | chr10:40270456-40270249 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 149, 20 |
| Conread position: | 273-465 |
| Cow position: | chr10:28721622-28721432 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 155 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 93, 84 |
Show alignments to all cow chromosomes.