Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 225-394 |
| Cow position: | chr13:19555836-19556003 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 139, 29 |
| Conread position: | 230-466 |
| Cow position: | chr13:42839451-42839213 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 130, 16 |
| Conread position: | 231-466 |
| Cow position: | chr13:19178364-19178599 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 43 |
| Conread position: | 231-466 |
| Cow position: | chr13:33517833-33517582 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 198 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 132, 15 |
| Conread position: | 232-368 |
| Cow position: | chr13:37592852-37592712 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 234-397 |
| Cow position: | chr13:20784681-20784842 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 49, 11 |
| Conread position: | 234-464 |
| Cow position: | chr13:48626840-48627066 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 56, 40 |
| Conread position: | 234-466 |
| Cow position: | chr13:2414121-2414350 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 153, 39 |
| Conread position: | 234-466 |
| Cow position: | chr13:8609459-8609225 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 83, 15 |
| Conread position: | 234-466 |
| Cow position: | chr13:20684028-20683797 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 234-466 |
| Cow position: | chr13:28683453-28683680 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 236-364 |
| Cow position: | chr13:43812172-43812304 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 107 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 41, 9 |
| Conread position: | 236-366 |
| Cow position: | chr13:5263195-5263064 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 69, 11 |
| Conread position: | 236-405 |
| Cow position: | chr13:38278040-38277875 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 130, 11 |
| Conread position: | 236-466 |
| Cow position: | chr13:21275949-21276182 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 236-466 |
| Cow position: | chr13:32151660-32151892 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 44, 10 |
| Conread position: | 236-466 |
| Cow position: | chr13:51528352-51528121 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 38, 9 |
| Conread position: | 236-466 |
| Cow position: | chr13:60509026-60508797 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 84, 38 |
| Conread position: | 236-467 |
| Cow position: | chr13:25531693-25531463 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 153, 9 |
| Conread position: | 237-466 |
| Cow position: | chr13:15592036-15591808 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 237-466 |
| Cow position: | chr13:23682650-23682424 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 238-431 |
| Cow position: | chr13:18989802-18989996 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 157 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 132, 23 |
| Conread position: | 238-465 |
| Cow position: | chr13:22775211-22774975 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 158, 28 |
| Conread position: | 239-387 |
| Cow position: | chr13:54418328-54418476 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 123, 35 |
| Conread position: | 239-463 |
| Cow position: | chr13:52894243-52894450 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 239-466 |
| Cow position: | chr13:6974259-6974491 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 44 |
| Conread position: | 239-466 |
| Cow position: | chr13:21989010-21988779 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 240-363 |
| Cow position: | chr13:57475319-57475200 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 99 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 240-439 |
| Cow position: | chr13:23199301-23199507 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 34 |
| Conread position: | 246-393 |
| Cow position: | chr13:25926895-25927042 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 246-457 |
| Cow position: | chr13:23270108-23269896 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 170 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 116, 27 |
| Conread position: | 256-464 |
| Cow position: | chr13:36264077-36264288 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 171 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 18 |
| Conread position: | 259-393 |
| Cow position: | chr13:40722593-40722460 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 107, 15 |
| Conread position: | 268-465 |
| Cow position: | chr13:54286639-54286445 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 112, 6 |
| Conread position: | 273-394 |
| Cow position: | chr13:22780075-22780196 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.