Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 232-386 |
| Cow position: | chr15:22136876-22137030 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 137, 15 |
| Conread position: | 232-466 |
| Cow position: | chr15:12837121-12836899 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 134, 14 |
| Conread position: | 234-387 |
| Cow position: | chr15:40009454-40009302 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 32, 11 |
| Conread position: | 234-466 |
| Cow position: | chr15:17233388-17233614 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 64, 39 |
| Conread position: | 236-364 |
| Cow position: | chr15:38394616-38394744 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 106 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-393 |
| Cow position: | chr15:1297935-1298090 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 236-393 |
| Cow position: | chr15:27973019-27972861 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 236-420 |
| Cow position: | chr15:24128845-24129031 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 146 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-445 |
| Cow position: | chr15:33605121-33605330 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 134, 9 |
| Conread position: | 236-466 |
| Cow position: | chr15:6082446-6082213 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-466 |
| Cow position: | chr15:19403179-19403405 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 12 |
| Conread position: | 236-466 |
| Cow position: | chr15:47843059-47842836 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 236-466 |
| Cow position: | chr15:49738847-49738617 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 179 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 124, 12 |
| Conread position: | 237-466 |
| Cow position: | chr15:6538704-6538473 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 238-387 |
| Cow position: | chr15:35642219-35642368 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 128, 36 |
| Conread position: | 238-396 |
| Cow position: | chr15:41619987-41619829 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 107, 11 |
| Conread position: | 239-431 |
| Cow position: | chr15:52739920-52739729 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 127, 8 |
| Conread position: | 239-467 |
| Cow position: | chr15:45245347-45245120 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 240-466 |
| Cow position: | chr15:18206311-18206088 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 50, 34 |
| Conread position: | 241-365 |
| Cow position: | chr15:50322797-50322920 (view UCSC Genome Browser custom track) |
| Alignm length: | 125 |
| Alignm identity: | 97 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 246-379 |
| Cow position: | chr15:10283903-10284034 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 103 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 121, 18 |
| Conread position: | 246-393 |
| Cow position: | chr15:2952922-2952776 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 246-466 |
| Cow position: | chr15:20459093-20458870 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 246-466 |
| Cow position: | chr15:22751658-22751878 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 246-466 |
| Cow position: | chr15:50302390-50302632 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 72, 28 |
| Conread position: | 247-447 |
| Cow position: | chr15:4689788-4689592 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 43, 74 |
| Conread position: | 251-387 |
| Cow position: | chr15:38935911-38936046 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 102 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 272-466 |
| Cow position: | chr15:23865797-23865599 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 160 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 273-464 |
| Cow position: | chr15:27423163-27422968 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 7, 17 |
Show alignments to all cow chromosomes.