Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 207-466 |
| Cow position: | chr18:49660151-49660413 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 202 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 28, 13 |
| Conread position: | 231-466 |
| Cow position: | chr18:37690746-37690970 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 179 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 136, 43 |
| Conread position: | 232-466 |
| Cow position: | chr18:55692679-55692449 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 182, 13 |
| Conread position: | 234-394 |
| Cow position: | chr18:5647108-5646952 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 234-477 |
| Cow position: | chr18:40759076-40758835 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 174, 22 |
| Conread position: | 236-391 |
| Cow position: | chr18:6610000-6610153 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 133, 37 |
| Conread position: | 236-466 |
| Cow position: | chr18:36445297-36445057 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 77, 22 |
| Conread position: | 237-392 |
| Cow position: | chr18:48290579-48290734 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 31, 12 |
| Conread position: | 237-466 |
| Cow position: | chr18:29371726-29371494 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 181 |
| Alignm E-value: | 8.96831e-44 |
| Alignm gaps (pig, cow): | 130, 9 |
| Conread position: | 238-394 |
| Cow position: | chr18:33157674-33157523 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 238-465 |
| Cow position: | chr18:14815480-14815707 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 35 |
| Conread position: | 238-466 |
| Cow position: | chr18:33793562-33793331 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 124, 35 |
| Conread position: | 239-392 |
| Cow position: | chr18:42455168-42455316 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 239-393 |
| Cow position: | chr18:3115316-3115163 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 239-467 |
| Cow position: | chr18:42747450-42747213 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 184 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 146, 38 |
| Conread position: | 246-466 |
| Cow position: | chr18:6309933-6309721 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 35, 46 |
| Conread position: | 246-466 |
| Cow position: | chr18:10656295-10656074 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 175 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 161, 28 |
| Conread position: | 246-466 |
| Cow position: | chr18:43283908-43284124 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 153, 28 |
| Conread position: | 262-466 |
| Cow position: | chr18:30420632-30420835 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 114, 12 |
Show alignments to all cow chromosomes.