Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 231-447 |
| Cow position: | chr19:39245785-39245567 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 42 |
| Conread position: | 231-465 |
| Cow position: | chr19:7053448-7053676 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 53, 14 |
| Conread position: | 231-466 |
| Cow position: | chr19:21115193-21114955 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 132, 43 |
| Conread position: | 235-432 |
| Cow position: | chr19:33858634-33858442 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 67, 10 |
| Conread position: | 236-341 |
| Cow position: | chr19:37423395-37423499 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 86 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 236-365 |
| Cow position: | chr19:11191737-11191870 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 109 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 57, 37 |
| Conread position: | 236-393 |
| Cow position: | chr19:31846663-31846818 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 131, 34 |
| Conread position: | 236-419 |
| Cow position: | chr19:24192284-24192099 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 59, 11 |
| Conread position: | 236-452 |
| Cow position: | chr19:10171882-10171653 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 133, 38 |
| Conread position: | 236-466 |
| Cow position: | chr19:24956563-24956780 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 178 |
| Alignm E-value: | 7.00005e-41 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 236-466 |
| Cow position: | chr19:46180935-46181161 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 236-467 |
| Cow position: | chr19:44839033-44839246 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 105, 9 |
| Conread position: | 237-389 |
| Cow position: | chr19:33468903-33468753 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 129, 9 |
| Conread position: | 237-451 |
| Cow position: | chr19:29755028-29755243 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 237-465 |
| Cow position: | chr19:54006797-54006565 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 237-468 |
| Cow position: | chr19:8771128-8770891 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 9 |
| Conread position: | 238-466 |
| Cow position: | chr19:38842676-38842897 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 36 |
| Conread position: | 238-467 |
| Cow position: | chr19:3489378-3489144 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-40 |
| Alignm gaps (pig, cow): | 9, 38 |
| Conread position: | 239-363 |
| Cow position: | chr19:26706327-26706450 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 49, 34 |
| Conread position: | 239-387 |
| Cow position: | chr19:53372018-53372165 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 124, 35 |
| Conread position: | 239-392 |
| Cow position: | chr19:54666780-54666932 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 127, 8 |
| Conread position: | 239-465 |
| Cow position: | chr19:31595177-31594948 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 240-466 |
| Cow position: | chr19:39395921-39395694 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 120, 34 |
| Conread position: | 241-466 |
| Cow position: | chr19:39697947-39697721 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 33 |
| Conread position: | 246-367 |
| Cow position: | chr19:6531762-6531642 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 246-385 |
| Cow position: | chr19:33882289-33882425 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 246-426 |
| Cow position: | chr19:43513120-43512942 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 127 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 101, 23 |
| Conread position: | 254-414 |
| Cow position: | chr19:419737-419581 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 112, 20 |
| Conread position: | 256-451 |
| Cow position: | chr19:39254637-39254837 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 18, 32 |
| Conread position: | 256-462 |
| Cow position: | chr19:52214949-52214745 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 111, 18 |
| Conread position: | 266-368 |
| Cow position: | chr19:55247477-55247376 (view UCSC Genome Browser custom track) |
| Alignm length: | 103 |
| Alignm identity: | 88 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 267-466 |
| Cow position: | chr19:42762941-42762735 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 7, 178 |
Show alignments to all cow chromosomes.