Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 203-385 |
| Cow position: | chr2:46153287-46153462 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 232-466 |
| Cow position: | chr2:46170979-46171210 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 232-466 |
| Cow position: | chr2:69676637-69676875 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 232-466 |
| Cow position: | chr2:78750436-78750197 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 233-466 |
| Cow position: | chr2:70895927-70895690 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 42 |
| Conread position: | 233-477 |
| Cow position: | chr2:52127699-52127942 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 133, 13 |
| Conread position: | 234-384 |
| Cow position: | chr2:68716776-68716921 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 234-396 |
| Cow position: | chr2:45554210-45554053 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 234-466 |
| Cow position: | chr2:15571633-15571872 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 135, 12 |
| Conread position: | 236-386 |
| Cow position: | chr2:80177870-80178020 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 236-394 |
| Cow position: | chr2:85246438-85246597 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 52, 38 |
| Conread position: | 236-405 |
| Cow position: | chr2:53430619-53430455 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 236-465 |
| Cow position: | chr2:49608481-49608252 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-466 |
| Cow position: | chr2:14854206-14853983 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 236-466 |
| Cow position: | chr2:21407813-21407588 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 38 |
| Conread position: | 237-466 |
| Cow position: | chr2:22640935-22640704 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 237-466 |
| Cow position: | chr2:77970249-77970483 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 181 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 123, 9 |
| Conread position: | 238-465 |
| Cow position: | chr2:42969999-42969759 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 239-382 |
| Cow position: | chr2:21698889-21698741 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 239-385 |
| Cow position: | chr2:31750079-31750225 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 108 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 122, 35 |
| Conread position: | 239-391 |
| Cow position: | chr2:47008453-47008608 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 116, 35 |
| Conread position: | 239-442 |
| Cow position: | chr2:1210878-1211084 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 239-456 |
| Cow position: | chr2:27145474-27145691 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 121, 35 |
| Conread position: | 239-460 |
| Cow position: | chr2:21416196-21415980 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 34 |
| Conread position: | 239-466 |
| Cow position: | chr2:38273431-38273200 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 168, 34 |
| Conread position: | 241-387 |
| Cow position: | chr2:62685524-62685378 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 117, 33 |
| Conread position: | 246-394 |
| Cow position: | chr2:70746680-70746532 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 121 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 95, 28 |
| Conread position: | 246-466 |
| Cow position: | chr2:33262734-33262956 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 179 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 246-466 |
| Cow position: | chr2:60956256-60956042 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 169, 28 |
| Conread position: | 246-466 |
| Cow position: | chr2:76561995-76561771 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 247-374 |
| Cow position: | chr2:21223999-21223873 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 247-396 |
| Cow position: | chr2:55480356-55480505 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 106, 27 |
| Conread position: | 247-466 |
| Cow position: | chr2:35092809-35093019 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 248-466 |
| Cow position: | chr2:68109862-68110082 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 117, 26 |
| Conread position: | 249-467 |
| Cow position: | chr2:29291661-29291883 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 175 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 131, 25 |
| Conread position: | 262-458 |
| Cow position: | chr2:45896881-45896678 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 139, 12 |
| Conread position: | 273-391 |
| Cow position: | chr2:62978808-62978927 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 97 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 273-466 |
| Cow position: | chr2:41915577-41915765 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 130, 68 |
Show alignments to all cow chromosomes.