Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 200-464 |
| Cow position: | chr21:20548922-20549193 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 207 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 181, 22 |
| Conread position: | 225-388 |
| Cow position: | chr21:38449480-38449648 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 231-466 |
| Cow position: | chr21:19766814-19766577 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 15 |
| Conread position: | 231-466 |
| Cow position: | chr21:34254320-34254557 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 44 |
| Conread position: | 232-383 |
| Cow position: | chr21:5426899-5426755 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 232-462 |
| Cow position: | chr21:36163002-36163236 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 234-466 |
| Cow position: | chr21:643284-643060 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 169, 11 |
| Conread position: | 235-464 |
| Cow position: | chr21:42540261-42540495 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 12 |
| Conread position: | 236-439 |
| Cow position: | chr21:49700080-49700286 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 236-462 |
| Cow position: | chr21:17282659-17282430 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 38 |
| Conread position: | 236-465 |
| Cow position: | chr21:8985501-8985273 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 10 |
| Conread position: | 236-466 |
| Cow position: | chr21:32237249-32237023 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 236-466 |
| Cow position: | chr21:46777018-46777250 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-466 |
| Cow position: | chr21:47802303-47802539 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 9 |
| Conread position: | 237-454 |
| Cow position: | chr21:34658987-34658769 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 5, 34 |
| Conread position: | 237-459 |
| Cow position: | chr21:36857581-36857359 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 167, 9 |
| Conread position: | 237-462 |
| Cow position: | chr21:21169988-21170215 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 130, 9 |
| Conread position: | 237-463 |
| Cow position: | chr21:10967187-10966959 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 124, 9 |
| Conread position: | 237-464 |
| Cow position: | chr21:32535928-32535703 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 10 |
| Conread position: | 239-430 |
| Cow position: | chr21:38918167-38917977 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 153 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 239-460 |
| Cow position: | chr21:5153569-5153346 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 239-463 |
| Cow position: | chr21:20044822-20045041 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 239-464 |
| Cow position: | chr21:5137537-5137782 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 115, 35 |
| Conread position: | 239-466 |
| Cow position: | chr21:18713235-18713009 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 158, 8 |
| Conread position: | 239-466 |
| Cow position: | chr21:26648054-26648281 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 176 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 24, 8 |
| Conread position: | 240-464 |
| Cow position: | chr21:33562965-33562739 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 154, 34 |
| Conread position: | 241-466 |
| Cow position: | chr21:3920260-3920489 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 39, 33 |
| Conread position: | 246-466 |
| Cow position: | chr21:13128148-13128373 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 152, 28 |
| Conread position: | 246-466 |
| Cow position: | chr21:36642852-36642630 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 247-466 |
| Cow position: | chr21:1464173-1463956 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 160, 27 |
| Conread position: | 249-465 |
| Cow position: | chr21:28512475-28512265 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 173 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 114, 25 |
| Conread position: | 273-466 |
| Cow position: | chr21:44280911-44281108 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.