Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 221-466 |
| Cow position: | chr4:2610135-2609894 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 89, 56 |
| Conread position: | 225-466 |
| Cow position: | chr4:37619991-37620235 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 24, 50 |
| Conread position: | 232-395 |
| Cow position: | chr4:10968498-10968660 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 130, 41 |
| Conread position: | 232-465 |
| Cow position: | chr4:61999568-61999799 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 179 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 169, 15 |
| Conread position: | 232-467 |
| Cow position: | chr4:53999622-53999869 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 194 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 130, 15 |
| Conread position: | 234-380 |
| Cow position: | chr4:2536716-2536574 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 133, 11 |
| Conread position: | 234-385 |
| Cow position: | chr4:40823228-40823379 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 133, 40 |
| Conread position: | 234-385 |
| Cow position: | chr4:63349590-63349739 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 123 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 236-365 |
| Cow position: | chr4:19708826-19708698 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 28 |
| Conread position: | 236-394 |
| Cow position: | chr4:44612887-44612730 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 236-420 |
| Cow position: | chr4:46668454-46668271 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 135, 14 |
| Conread position: | 236-462 |
| Cow position: | chr4:60897393-60897617 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 180 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 130, 9 |
| Conread position: | 236-466 |
| Cow position: | chr4:11099786-11100012 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 162, 9 |
| Conread position: | 236-466 |
| Cow position: | chr4:15904981-15904753 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 10 |
| Conread position: | 236-466 |
| Cow position: | chr4:38999307-38999086 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 236-466 |
| Cow position: | chr4:43369969-43370198 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 37 |
| Conread position: | 236-466 |
| Cow position: | chr4:54501566-54501797 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 178 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 131, 9 |
| Conread position: | 237-391 |
| Cow position: | chr4:23445167-23445321 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 9, 39 |
| Conread position: | 237-412 |
| Cow position: | chr4:14414459-14414634 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 36, 132 |
| Conread position: | 237-466 |
| Cow position: | chr4:16637717-16637934 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 237-466 |
| Cow position: | chr4:19238121-19237895 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 173 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 133, 36 |
| Conread position: | 237-477 |
| Cow position: | chr4:18519614-18519369 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 29, 9 |
| Conread position: | 238-465 |
| Cow position: | chr4:48137792-48137567 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 35, 9 |
| Conread position: | 239-466 |
| Cow position: | chr4:14743141-14742911 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 240-364 |
| Cow position: | chr4:52177533-52177409 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 102 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 240-405 |
| Cow position: | chr4:39128414-39128247 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 152 |
| Conread position: | 240-466 |
| Cow position: | chr4:6822346-6822129 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 26, 38 |
| Conread position: | 240-466 |
| Cow position: | chr4:22259541-22259776 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 127, 20 |
| Conread position: | 240-466 |
| Cow position: | chr4:24371972-24372199 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 122, 28 |
| Conread position: | 241-396 |
| Cow position: | chr4:33623598-33623443 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 125, 33 |
| Conread position: | 246-365 |
| Cow position: | chr4:63965114-63965234 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 98 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 23, 29 |
| Conread position: | 255-456 |
| Cow position: | chr4:39231657-39231861 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 115, 19 |
| Conread position: | 260-466 |
| Cow position: | chr4:44839024-44839231 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 166 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 109, 14 |
Show alignments to all cow chromosomes.