Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 225-393 |
| Cow position: | chr6:29239883-29239718 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 13, 53 |
| Conread position: | 231-466 |
| Cow position: | chr6:6343362-6343127 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 185 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 139, 16 |
| Conread position: | 232-457 |
| Cow position: | chr6:54368966-54369188 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 232-467 |
| Cow position: | chr6:9008677-9008909 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 135, 13 |
| Conread position: | 234-384 |
| Cow position: | chr6:53460640-53460787 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 234-451 |
| Cow position: | chr6:38218603-38218378 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 130, 11 |
| Conread position: | 236-363 |
| Cow position: | chr6:52025722-52025848 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 236-375 |
| Cow position: | chr6:53519693-53519827 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 236-464 |
| Cow position: | chr6:55607873-55608105 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 177 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 236-465 |
| Cow position: | chr6:5302477-5302699 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 131, 37 |
| Conread position: | 236-466 |
| Cow position: | chr6:1770264-1770496 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 186 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 236-466 |
| Cow position: | chr6:12337917-12337684 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 236-466 |
| Cow position: | chr6:12629955-12629713 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 5, 25 |
| Conread position: | 237-385 |
| Cow position: | chr6:60442348-60442202 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 237-466 |
| Cow position: | chr6:55594322-55594091 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 176 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 237-478 |
| Cow position: | chr6:51877841-51877598 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 148, 9 |
| Conread position: | 238-394 |
| Cow position: | chr6:68049365-68049210 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 239-405 |
| Cow position: | chr6:64449318-64449155 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 130, 35 |
| Conread position: | 240-361 |
| Cow position: | chr6:37603451-37603331 (view UCSC Genome Browser custom track) |
| Alignm length: | 122 |
| Alignm identity: | 100 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 241-466 |
| Cow position: | chr6:25407465-25407707 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 113, 33 |
| Conread position: | 246-387 |
| Cow position: | chr6:15266344-15266488 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 25 |
| Conread position: | 246-464 |
| Cow position: | chr6:64431861-64431643 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 119, 28 |
| Conread position: | 247-466 |
| Cow position: | chr6:6117629-6117857 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 118, 16 |
| Conread position: | 255-363 |
| Cow position: | chr6:55546248-55546355 (view UCSC Genome Browser custom track) |
| Alignm length: | 110 |
| Alignm identity: | 92 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 103, 19 |
| Conread position: | 256-394 |
| Cow position: | chr6:49685497-49685359 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 110 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 107, 18 |
| Conread position: | 266-466 |
| Cow position: | chr6:56502211-56502011 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 159 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 100, 8 |
| Conread position: | 274-466 |
| Cow position: | chr6:9751145-9751346 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 93, 0 |
Show alignments to all cow chromosomes.