Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 225-365 |
| Cow position: | chr7:14029279-14029142 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 111 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 225-453 |
| Cow position: | chr7:49942479-49942703 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 13, 51 |
| Conread position: | 232-383 |
| Cow position: | chr7:57162088-57161936 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 11, 43 |
| Conread position: | 232-455 |
| Cow position: | chr7:20415366-20415591 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 42 |
| Conread position: | 232-466 |
| Cow position: | chr7:34004305-34004069 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 171, 42 |
| Conread position: | 232-466 |
| Cow position: | chr7:39904031-39903805 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 188 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 135, 41 |
| Conread position: | 234-393 |
| Cow position: | chr7:45658451-45658607 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 234-464 |
| Cow position: | chr7:34554201-34553952 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 50, 103 |
| Conread position: | 234-466 |
| Cow position: | chr7:40321421-40321196 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 132, 14 |
| Conread position: | 236-364 |
| Cow position: | chr7:255879-256001 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 100 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 236-400 |
| Cow position: | chr7:44095009-44095169 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 19, 12 |
| Conread position: | 236-464 |
| Cow position: | chr7:66894606-66894837 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 236-465 |
| Cow position: | chr7:64269051-64269280 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 39 |
| Conread position: | 236-466 |
| Cow position: | chr7:35652142-35652375 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 194 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 236-466 |
| Cow position: | chr7:46823602-46823380 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 184 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 133, 10 |
| Conread position: | 236-466 |
| Cow position: | chr7:50449625-50449394 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 52, 10 |
| Conread position: | 236-466 |
| Cow position: | chr7:53992634-53992403 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 6, 37 |
| Conread position: | 237-466 |
| Cow position: | chr7:32901949-32901713 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 37, 9 |
| Conread position: | 238-433 |
| Cow position: | chr7:52776823-52777019 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 166, 11 |
| Conread position: | 239-364 |
| Cow position: | chr7:1761649-1761526 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 107 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 239-394 |
| Cow position: | chr7:37455251-37455098 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 130, 30 |
| Conread position: | 239-429 |
| Cow position: | chr7:2290067-2290251 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 125, 11 |
| Conread position: | 239-464 |
| Cow position: | chr7:43109601-43109820 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 121, 35 |
| Conread position: | 239-466 |
| Cow position: | chr7:5242047-5241823 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 240-460 |
| Cow position: | chr7:3729021-3728801 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 179 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 34 |
| Conread position: | 240-466 |
| Cow position: | chr7:6566628-6566399 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 130, 34 |
| Conread position: | 241-364 |
| Cow position: | chr7:33280060-33280182 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 95 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 241-462 |
| Cow position: | chr7:34433350-34433574 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 177 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 81, 33 |
| Conread position: | 241-466 |
| Cow position: | chr7:47775797-47775571 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 162, 33 |
| Conread position: | 246-349 |
| Cow position: | chr7:43103531-43103633 (view UCSC Genome Browser custom track) |
| Alignm length: | 104 |
| Alignm identity: | 89 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 246-394 |
| Cow position: | chr7:63023064-63022916 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 116, 28 |
| Conread position: | 246-462 |
| Cow position: | chr7:40952937-40953159 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 117, 0 |
| Conread position: | 246-466 |
| Cow position: | chr7:8785890-8785668 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 28 |
| Conread position: | 246-466 |
| Cow position: | chr7:25722744-25722960 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 176 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 246-466 |
| Cow position: | chr7:43711143-43710920 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 155, 28 |
| Conread position: | 273-444 |
| Cow position: | chr7:14450253-14450079 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 93, 154 |
| Conread position: | 274-467 |
| Cow position: | chr7:19466370-19466561 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 129, 66 |
Show alignments to all cow chromosomes.