Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 225-364 |
| Cow position: | chr8:20102857-20102996 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 23, 50 |
| Conread position: | 228-448 |
| Cow position: | chr8:4940399-4940622 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 45 |
| Conread position: | 231-462 |
| Cow position: | chr8:52308819-52309052 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 17 |
| Conread position: | 231-466 |
| Cow position: | chr8:6232992-6233228 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 197 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 136, 16 |
| Conread position: | 234-389 |
| Cow position: | chr8:10263260-10263413 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 234-430 |
| Cow position: | chr8:10970734-10970533 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 62, 11 |
| Conread position: | 234-466 |
| Cow position: | chr8:1472964-1472719 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 128, 11 |
| Conread position: | 236-394 |
| Cow position: | chr8:53451417-53451257 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 38 |
| Conread position: | 236-411 |
| Cow position: | chr8:48437497-48437673 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 33, 10 |
| Conread position: | 236-425 |
| Cow position: | chr8:43191123-43191313 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 171, 36 |
| Conread position: | 236-462 |
| Cow position: | chr8:24390297-24390520 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 178 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 167, 11 |
| Conread position: | 236-464 |
| Cow position: | chr8:33585063-33584818 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 122, 10 |
| Conread position: | 236-466 |
| Cow position: | chr8:3704521-3704291 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 236-466 |
| Cow position: | chr8:10699557-10699787 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 189 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-466 |
| Cow position: | chr8:21961150-21960920 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 236-467 |
| Cow position: | chr8:61567465-61567697 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 10 |
| Conread position: | 237-393 |
| Cow position: | chr8:37571803-37571962 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 59, 36 |
| Conread position: | 237-465 |
| Cow position: | chr8:5177085-5176863 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 43, 9 |
| Conread position: | 237-466 |
| Cow position: | chr8:30244932-30245155 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 10 |
| Conread position: | 239-394 |
| Cow position: | chr8:24952241-24952079 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 18, 36 |
| Conread position: | 239-420 |
| Cow position: | chr8:61841887-61841702 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 239-454 |
| Cow position: | chr8:31954553-31954332 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 58, 8 |
| Conread position: | 240-351 |
| Cow position: | chr8:24328948-24329058 (view UCSC Genome Browser custom track) |
| Alignm length: | 113 |
| Alignm identity: | 92 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 240-429 |
| Cow position: | chr8:19642369-19642177 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 160 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 32 |
| Conread position: | 246-405 |
| Cow position: | chr8:2774678-2774519 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 121, 28 |
| Conread position: | 246-458 |
| Cow position: | chr8:14893304-14893513 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 246-466 |
| Cow position: | chr8:25083162-25082937 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 118, 28 |
| Conread position: | 248-388 |
| Cow position: | chr8:31762928-31763066 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 121, 46 |
| Conread position: | 261-470 |
| Cow position: | chr8:26404856-26405060 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 155, 13 |
| Conread position: | 273-364 |
| Cow position: | chr8:18290197-18290288 (view UCSC Genome Browser custom track) |
| Alignm length: | 92 |
| Alignm identity: | 81 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 273-379 |
| Cow position: | chr8:225498-225605 (view UCSC Genome Browser custom track) |
| Alignm length: | 108 |
| Alignm identity: | 89 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 273-466 |
| Cow position: | chr8:25082351-25082154 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.