Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 225-386 |
| Cow position: | chr9:8288743-8288904 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 227-464 |
| Cow position: | chr9:3532774-3532548 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 8.00001e-42 |
| Alignm gaps (pig, cow): | 139, 20 |
| Conread position: | 231-464 |
| Cow position: | chr9:32238514-32238753 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 29, 15 |
| Conread position: | 234-396 |
| Cow position: | chr9:33940741-33940904 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-360 |
| Cow position: | chr9:38875438-38875314 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 48, 11 |
| Conread position: | 236-393 |
| Cow position: | chr9:17871968-17871814 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 123 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 7, 35 |
| Conread position: | 236-393 |
| Cow position: | chr9:36999923-36999767 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 131, 11 |
| Conread position: | 236-464 |
| Cow position: | chr9:42998329-42998094 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 236-466 |
| Cow position: | chr9:8869004-8868766 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 193 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 37 |
| Conread position: | 236-466 |
| Cow position: | chr9:18140158-18139925 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 39 |
| Conread position: | 236-466 |
| Cow position: | chr9:25969481-25969716 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-466 |
| Cow position: | chr9:29184994-29184767 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 236-466 |
| Cow position: | chr9:50080908-50080676 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 175 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 124, 11 |
| Conread position: | 237-393 |
| Cow position: | chr9:30138268-30138419 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 239-365 |
| Cow position: | chr9:52001148-52001272 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 239-427 |
| Cow position: | chr9:52484776-52484590 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 164, 15 |
| Conread position: | 239-466 |
| Cow position: | chr9:1984377-1984136 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 128, 8 |
| Conread position: | 239-466 |
| Cow position: | chr9:34697157-34696926 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 34 |
| Conread position: | 239-477 |
| Cow position: | chr9:20989314-20989074 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 180 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 128, 35 |
| Conread position: | 240-466 |
| Cow position: | chr9:18215766-18215543 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 163, 20 |
| Conread position: | 240-466 |
| Cow position: | chr9:48017682-48017453 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 177 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 122, 34 |
| Conread position: | 243-466 |
| Cow position: | chr9:13205424-13205200 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 178 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 155, 31 |
| Conread position: | 246-391 |
| Cow position: | chr9:29825183-29825321 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 246-418 |
| Cow position: | chr9:5327402-5327567 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 246-466 |
| Cow position: | chr9:3387838-3388061 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 120, 28 |
| Conread position: | 246-466 |
| Cow position: | chr9:27697581-27697361 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 174 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 111, 19 |
| Conread position: | 246-466 |
| Cow position: | chr9:53778178-53777954 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 114, 28 |
| Conread position: | 247-466 |
| Cow position: | chr9:3574490-3574702 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 97, 70 |
| Conread position: | 258-466 |
| Cow position: | chr9:34919107-34918914 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 273-466 |
| Cow position: | chr9:34738047-34737848 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 0 |
Show alignments to all cow chromosomes.