Cow genome map
| Conread name: | rpigcf0_016341.y1 |
| Conread position: | 210-462 |
| Cow position: | chrX:21795441-21795186 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 220-466 |
| Cow position: | chrX:21665658-21665905 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 201 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 55 |
| Conread position: | 231-466 |
| Cow position: | chrX:10865945-10866181 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 15 |
| Conread position: | 231-466 |
| Cow position: | chrX:36249939-36250176 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 15 |
| Conread position: | 231-467 |
| Cow position: | chrX:7351223-7350987 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 192 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 41 |
| Conread position: | 234-384 |
| Cow position: | chrX:18812175-18812029 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 234-387 |
| Cow position: | chrX:2383410-2383257 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 234-465 |
| Cow position: | chrX:24201107-24200885 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 0 |
| Conread position: | 234-466 |
| Cow position: | chrX:41103710-41103474 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 38, 12 |
| Conread position: | 236-363 |
| Cow position: | chrX:26285899-26285772 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 13, 39 |
| Conread position: | 236-394 |
| Cow position: | chrX:23514098-23514257 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 236-462 |
| Cow position: | chrX:15485707-15485935 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 185 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 39 |
| Conread position: | 236-466 |
| Cow position: | chrX:24105545-24105312 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 38 |
| Conread position: | 236-466 |
| Cow position: | chrX:31442904-31443134 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 196 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 167, 11 |
| Conread position: | 236-466 |
| Cow position: | chrX:35268799-35268576 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 182 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 131, 9 |
| Conread position: | 237-363 |
| Cow position: | chrX:3579861-3579737 (view UCSC Genome Browser custom track) |
| Alignm length: | 127 |
| Alignm identity: | 101 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 237-466 |
| Cow position: | chrX:11949576-11949807 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 112, 9 |
| Conread position: | 237-466 |
| Cow position: | chrX:39704615-39704391 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 166, 9 |
| Conread position: | 239-393 |
| Cow position: | chrX:42492598-42492748 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 124 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 11, 36 |
| Conread position: | 239-465 |
| Cow position: | chrX:44054720-44054492 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 177 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 153 |
| Conread position: | 239-466 |
| Cow position: | chrX:7382239-7382010 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 187 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 35 |
| Conread position: | 239-467 |
| Cow position: | chrX:20697690-20697918 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 181 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 151 |
| Conread position: | 240-466 |
| Cow position: | chrX:34238636-34238406 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 180 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 8, 35 |
| Conread position: | 240-466 |
| Cow position: | chrX:38967562-38967337 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 30 |
| Conread position: | 240-467 |
| Cow position: | chrX:8797167-8796936 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 190 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 35 |
| Conread position: | 241-392 |
| Cow position: | chrX:27772047-27772193 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 249-462 |
| Cow position: | chrX:13868599-13868387 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 172 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 260-466 |
| Cow position: | chrX:45412759-45412966 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 8, 15 |
| Conread position: | 263-432 |
| Cow position: | chrX:40647869-40647698 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 142 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 142, 11 |
Show alignments to all cow chromosomes.