Non-Coding RNA Search

Cow genome map


           Conread name:
           rpigcf0_017685.y1
        

               Conread position:
               21-307
               

               Cow position:
               chr15:32977975-32977685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               211
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               171, 11
               

               Conread position:
               38-303
               

               Cow position:
               chr15:3695504-3695790 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               90, 119
               

               Conread position:
               39-463
               

               Cow position:
               chr15:26158727-26158297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               315
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               94, 25
               

               Conread position:
               40-198
               

               Cow position:
               chr15:906770-906609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               120
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 136
               

               Conread position:
               42-581
               

               Cow position:
               chr15:47821704-47822253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               569
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 10
               

               Conread position:
               43-348
               

               Cow position:
               chr15:23780201-23779871 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               229
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               13, 250
               

               Conread position:
               44-460
               

               Cow position:
               chr15:16543563-16543147 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               299
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               145, 5
               

               Conread position:
               45-200
               

               Cow position:
               chr15:47773606-47773454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               119
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               147, 85
               

               Conread position:
               45-461
               

               Cow position:
               chr15:39599321-39599758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 52
               

               Conread position:
               46-191
               

               Cow position:
               chr15:52629243-52629096 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               21, 117
               

               Conread position:
               46-222
               

               Cow position:
               chr15:36621276-36621461 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               137
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               87, 21
               

               Conread position:
               46-287
               

               Cow position:
               chr15:36388174-36388432 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               91, 40
               

               Conread position:
               46-376
               

               Cow position:
               chr15:20422890-20422551 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               112, 39
               

               Conread position:
               46-503
               

               Cow position:
               chr15:8230668-8230221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               472
               

               Alignm identity:
               307
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               47-191
               

               Cow position:
               chr15:10199211-10199358 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               92, 5
               

               Conread position:
               47-432
               

               Cow position:
               chr15:5535653-5536039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 26
               

               Conread position:
               48-463
               

               Cow position:
               chr15:16822828-16823257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               142, 19
               

               Conread position:
               48-577
               

               Cow position:
               chr15:6969865-6970440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               589
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               49-191
               

               Cow position:
               chr15:49422105-49421966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               118
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               23, 82
               

               Conread position:
               49-212
               

               Cow position:
               chr15:18941912-18942085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               131
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               49-222
               

               Cow position:
               chr15:9314601-9314791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               140
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               49-376
               

               Cow position:
               chr15:9879502-9879168 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               84, 43
               

               Conread position:
               49-444
               

               Cow position:
               chr15:31599234-31599634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               280
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               154, 31
               

               Conread position:
               49-453
               

               Cow position:
               chr15:27900627-27900194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 228
               

               Conread position:
               49-463
               

               Cow position:
               chr15:4138013-4138457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 19
               

               Conread position:
               49-463
               

               Cow position:
               chr15:4677122-4676686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               296
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               11, 223
               

               Conread position:
               49-463
               

               Cow position:
               chr15:21941970-21941526 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 296
               

               Conread position:
               49-463
               

               Cow position:
               chr15:35641890-35642340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 246
               

               Conread position:
               49-467
               

               Cow position:
               chr15:27247401-27247837 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               292
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               20, 123
               

               Conread position:
               49-471
               

               Cow position:
               chr15:25208881-25208437 (view UCSC Genome Browser custom track)
               

               Alignm length:
               453
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               90, 226
               

               Conread position:
               49-561
               

               Cow position:
               chr15:26896821-26896274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               560
               

               Alignm identity:
               392
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 191
               

               Conread position:
               49-581
               

               Cow position:
               chr15:40957457-40958017 (view UCSC Genome Browser custom track)
               

               Alignm length:
               571
               

               Alignm identity:
               402
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               50-222
               

               Cow position:
               chr15:4248029-4248213 (view UCSC Genome Browser custom track)
               

               Alignm length:
               187
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               91, 16
               

               Conread position:
               50-463
               

               Cow position:
               chr15:43776250-43776659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               300
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               137, 81
               

               Conread position:
               50-467
               

               Cow position:
               chr15:43914219-43913760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               461
               

               Alignm identity:
               312
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               88, 222
               

               Conread position:
               51-191
               

               Cow position:
               chr15:17140137-17139995 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               87, 60
               

               Conread position:
               51-233
               

               Cow position:
               chr15:12913620-12913421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               200
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               51-446
               

               Cow position:
               chr15:6168653-6168212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               297
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               77, 296
               

               Conread position:
               51-446
               

               Cow position:
               chr15:8006858-8007284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               284
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               87, 424
               

               Conread position:
               51-461
               

               Cow position:
               chr15:28924882-28924448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               39, 218
               

               Conread position:
               51-463
               

               Cow position:
               chr15:19402887-19403298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 15
               

               Conread position:
               51-463
               

               Cow position:
               chr15:20472664-20472226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               444
               

               Alignm identity:
               302
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               94, 287
               

               Conread position:
               51-572
               

               Cow position:
               chr15:33284756-33285328 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               393
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 57
               

               Conread position:
               52-248
               

               Cow position:
               chr15:16230111-16230311 (view UCSC Genome Browser custom track)
               

               Alignm length:
               204
               

               Alignm identity:
               151
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               76, 17
               

               Conread position:
               52-463
               

               Cow position:
               chr15:24994632-24994205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               16, 36
               

               Conread position:
               52-463
               

               Cow position:
               chr15:51427945-51427503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               296
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               52-470
               

               Cow position:
               chr15:43626345-43626788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               28, 235
               

               Conread position:
               53-141
               

               Cow position:
               chr15:5273315-5273403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               89
               

               Alignm identity:
               79
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               53-189
               

               Cow position:
               chr15:38196196-38196053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               146
               

               Alignm identity:
               119
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               5, 50
               

               Conread position:
               53-191
               

               Cow position:
               chr15:11102575-11102443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               112
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               53-191
               

               Cow position:
               chr15:28098994-28099140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               148
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               86, 39
               

               Conread position:
               53-223
               

               Cow position:
               chr15:18763158-18762973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               135
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               53-340
               

               Cow position:
               chr15:19950368-19950666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 55
               

               Conread position:
               53-439
               

               Cow position:
               chr15:1804457-1804032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 221
               

               Conread position:
               53-446
               

               Cow position:
               chr15:225922-225500 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 235
               

               Conread position:
               53-457
               

               Cow position:
               chr15:26919387-26918957 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 50
               

               Conread position:
               53-463
               

               Cow position:
               chr15:9494396-9493973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               43, 18
               

               Conread position:
               53-463
               

               Cow position:
               chr15:12304522-12304961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               53-463
               

               Cow position:
               chr15:13846683-13846257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 146
               

               Conread position:
               53-463
               

               Cow position:
               chr15:20487318-20486897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               53-463
               

               Cow position:
               chr15:29810008-29810429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 13
               

               Conread position:
               53-463
               

               Cow position:
               chr15:39598127-39598558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 250
               

               Conread position:
               53-471
               

               Cow position:
               chr15:24284887-24285313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               278
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               95, 13
               

               Conread position:
               54-182
               

               Cow position:
               chr15:33510241-33510366 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               98
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               54-431
               

               Cow position:
               chr15:36773798-36773406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 41
               

               Conread position:
               54-441
               

               Cow position:
               chr15:49230430-49230043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               404
               

               Alignm identity:
               283
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 109
               

               Conread position:
               54-457
               

               Cow position:
               chr15:17213364-17213766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               278
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               154, 20
               

               Conread position:
               54-494
               

               Cow position:
               chr15:26753105-26752664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               465
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 131
               

               Conread position:
               54-581
               

               Cow position:
               chr15:26934048-26933550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               536
               

               Alignm identity:
               350
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               148, 67
               

               Conread position:
               55-160
               

               Cow position:
               chr15:46799-46908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               110
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               55-169
               

               Cow position:
               chr15:37717281-37717167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               115
               

               Alignm identity:
               89
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               55-191
               

               Cow position:
               chr15:53006051-53005911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               108
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               73, 25
               

               Conread position:
               55-192
               

               Cow position:
               chr15:49959421-49959560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               112
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               82, 40
               

               Conread position:
               55-315
               

               Cow position:
               chr15:14987879-14988157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               282
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               78, 244
               

               Conread position:
               55-327
               

               Cow position:
               chr15:20723096-20722809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               85, 17
               

               Conread position:
               55-374
               

               Cow position:
               chr15:1857610-1857953 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               78, 56
               

               Conread position:
               55-383
               

               Cow position:
               chr15:9106933-9107270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 37
               

               Conread position:
               55-394
               

               Cow position:
               chr15:18671565-18671207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 42
               

               Conread position:
               55-437
               

               Cow position:
               chr15:24616451-24616861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               72, 128
               

               Conread position:
               55-446
               

               Cow position:
               chr15:47990882-47990459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               77, 118
               

               Conread position:
               55-446
               

               Cow position:
               chr15:51460120-51460530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               97, 222
               

               Conread position:
               55-457
               

               Cow position:
               chr15:49922019-49922454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 226
               

               Conread position:
               55-461
               

               Cow position:
               chr15:18017811-18018229 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               55, 88
               

               Conread position:
               55-461
               

               Cow position:
               chr15:34255816-34255429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               280
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               139, 40
               

               Conread position:
               55-462
               

               Cow position:
               chr15:1301030-1301459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               290
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               83, 119
               

               Conread position:
               55-463
               

               Cow position:
               chr15:14020381-14020791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               421
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 77
               

               Conread position:
               56-191
               

               Cow position:
               chr15:840262-840120 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               110
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               56-191
               

               Cow position:
               chr15:9128782-9128643 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               45, 61
               

               Conread position:
               56-191
               

               Cow position:
               chr15:11630215-11630074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               56-191
               

               Cow position:
               chr15:14964275-14964139 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               56-191
               

               Cow position:
               chr15:26849647-26849509 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               56-191
               

               Cow position:
               chr15:33677277-33677408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               136
               

               Alignm identity:
               107
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               56-191
               

               Cow position:
               chr15:41049572-41049434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               82, 29
               

               Conread position:
               56-194
               

               Cow position:
               chr15:41321067-41320923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               56-210
               

               Cow position:
               chr15:11909062-11908895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               56-210
               

               Cow position:
               chr15:36457732-36457570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               56-222
               

               Cow position:
               chr15:45574743-45574571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               132
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               82, 39
               

               Conread position:
               56-222
               

               Cow position:
               chr15:52791825-52792002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               137
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               73, 123
               

               Conread position:
               56-230
               

               Cow position:
               chr15:21903522-21903337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               138
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 36
               

               Conread position:
               56-236
               

               Cow position:
               chr15:14880447-14880264 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               140
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               137, 79
               

               Conread position:
               56-255
               

               Cow position:
               chr15:26529781-26530000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               76, 19
               

               Conread position:
               56-260
               

               Cow position:
               chr15:6037561-6037340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               167
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               136, 156
               

               Conread position:
               56-274
               

               Cow position:
               chr15:38845809-38846029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               226
               

               Alignm identity:
               160
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               90, 139
               

               Conread position:
               56-304
               

               Cow position:
               chr15:36952314-36952043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               194
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               81, 36
               

               Conread position:
               56-326
               

               Cow position:
               chr15:4508054-4508327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 56
               

               Conread position:
               56-328
               

               Cow position:
               chr15:25349859-25350146 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               73, 243
               

               Conread position:
               56-328
               

               Cow position:
               chr15:39286526-39286232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               72, 123
               

               Conread position:
               56-334
               

               Cow position:
               chr15:35425907-35425627 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               207
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               136, 72
               

               Conread position:
               56-340
               

               Cow position:
               chr15:14758346-14758059 (view UCSC Genome Browser custom track)
               

               Alignm length:
               295
               

               Alignm identity:
               196
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               72, 94
               

               Conread position:
               56-346
               

               Cow position:
               chr15:5409009-5408711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               305
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 214
               

               Conread position:
               56-355
               

               Cow position:
               chr15:5158256-5158581 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               77, 251
               

               Conread position:
               56-356
               

               Cow position:
               chr15:5717604-5717917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 116
               

               Conread position:
               56-374
               

               Cow position:
               chr15:24982291-24981967 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               227
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               68, 22
               

               Conread position:
               56-376
               

               Cow position:
               chr15:36353551-36353896 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               25, 260
               

               Conread position:
               56-376
               

               Cow position:
               chr15:37204955-37205272 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               231
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               75, 168
               

               Conread position:
               56-394
               

               Cow position:
               chr15:22553656-22553297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 279
               

               Conread position:
               56-409
               

               Cow position:
               chr15:608028-608410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               387
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 239
               

               Conread position:
               56-409
               

               Cow position:
               chr15:31137580-31137201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 238
               

               Conread position:
               56-425
               

               Cow position:
               chr15:36887724-36888102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               81, 102
               

               Conread position:
               56-432
               

               Cow position:
               chr15:24411324-24411694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               386
               

               Alignm identity:
               256
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               71, 141
               

               Conread position:
               56-434
               

               Cow position:
               chr15:21822042-21821629 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 240
               

               Conread position:
               56-439
               

               Cow position:
               chr15:5072213-5071804 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               291
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               59, 201
               

               Conread position:
               56-449
               

               Cow position:
               chr15:1722956-1722545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 81
               

               Conread position:
               56-460
               

               Cow position:
               chr15:26912183-26911762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               56-461
               

               Cow position:
               chr15:20370567-20370145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 237
               

               Conread position:
               56-462
               

               Cow position:
               chr15:17870407-17869976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               285
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               41, 236
               

               Conread position:
               56-463
               

               Cow position:
               chr15:795132-794693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 300
               

               Conread position:
               56-463
               

               Cow position:
               chr15:7192360-7191941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               293
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               137, 76
               

               Conread position:
               56-463
               

               Cow position:
               chr15:13284920-13285354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               303
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               135, 41
               

               Conread position:
               56-463
               

               Cow position:
               chr15:15214920-15215340 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               293
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               105, 71
               

               Conread position:
               56-463
               

               Cow position:
               chr15:21420832-21421262 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 39
               

               Conread position:
               56-463
               

               Cow position:
               chr15:23180326-23180742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 265
               

               Conread position:
               56-463
               

               Cow position:
               chr15:30001581-30002010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 212
               

               Conread position:
               56-463
               

               Cow position:
               chr15:32980149-32979714 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               298
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               80, 46
               

               Conread position:
               56-463
               

               Cow position:
               chr15:37931850-37931449 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 37
               

               Conread position:
               56-463
               

               Cow position:
               chr15:39405627-39406055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               446
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 102
               

               Conread position:
               56-463
               

               Cow position:
               chr15:45245656-45245230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               303
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               85, 117
               

               Conread position:
               56-467
               

               Cow position:
               chr15:23798637-23798195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               133, 227
               

               Conread position:
               56-467
               

               Cow position:
               chr15:38883031-38883480 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               56-468
               

               Cow position:
               chr15:44051596-44051171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 135
               

               Conread position:
               56-470
               

               Cow position:
               chr15:2145230-2144803 (view UCSC Genome Browser custom track)
               

               Alignm length:
               430
               

               Alignm identity:
               287
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 143
               

               Conread position:
               56-470
               

               Cow position:
               chr15:22531558-22531989 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 103
               

               Conread position:
               56-577
               

               Cow position:
               chr15:36391556-36392125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               583
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 124
               

               Conread position:
               56-577
               

               Cow position:
               chr15:37381514-37382085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               577
               

               Alignm identity:
               403
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 223
               

               Conread position:
               56-580
               

               Cow position:
               chr15:1083485-1082921 (view UCSC Genome Browser custom track)
               

               Alignm length:
               576
               

               Alignm identity:
               391
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 36
               

               Conread position:
               57-191
               

               Cow position:
               chr15:43715216-43715354 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               57-191
               

               Cow position:
               chr15:47920261-47920122 (view UCSC Genome Browser custom track)
               

               Alignm length:
               140
               

               Alignm identity:
               105
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               57-223
               

               Cow position:
               chr15:15025053-15025220 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               135, 78
               

               Conread position:
               57-308
               

               Cow position:
               chr15:30983908-30983663 (view UCSC Genome Browser custom track)
               

               Alignm length:
               259
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               57-318
               

               Cow position:
               chr15:41528080-41527806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               283
               

               Alignm identity:
               214
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               77, 31
               

               Conread position:
               57-326
               

               Cow position:
               chr15:43114832-43114543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               213
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               57-364
               

               Cow position:
               chr15:33178540-33178209 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               39, 230
               

               Conread position:
               57-368
               

               Cow position:
               chr15:30471093-30470750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               70, 222
               

               Conread position:
               57-400
               

               Cow position:
               chr15:9648803-9648458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               78, 69
               

               Conread position:
               57-444
               

               Cow position:
               chr15:50350729-50351118 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 82
               

               Conread position:
               57-461
               

               Cow position:
               chr15:20459425-20458982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               331
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 235
               

               Conread position:
               57-462
               

               Cow position:
               chr15:11996142-11995706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 109
               

               Conread position:
               57-462
               

               Cow position:
               chr15:18720221-18720633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               281
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               153, 103
               

               Conread position:
               57-463
               

               Cow position:
               chr15:12163615-12163201 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 93
               

               Conread position:
               57-463
               

               Cow position:
               chr15:22530967-22531381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               299
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 74
               

               Conread position:
               57-478
               

               Cow position:
               chr15:12722970-12723419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               454
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 189
               

               Conread position:
               57-480
               

               Cow position:
               chr15:50322497-50322931 (view UCSC Genome Browser custom track)
               

               Alignm length:
               447
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               135, 47
               

               Conread position:
               58-143
               

               Cow position:
               chr15:21927428-21927515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               78
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               58-191
               

               Cow position:
               chr15:41475940-41475802 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               109
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               58-208
               

               Cow position:
               chr15:6219934-6219778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               123
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               72, 112
               

               Conread position:
               58-230
               

               Cow position:
               chr15:14353010-14353173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               136
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               69, 35
               

               Conread position:
               58-303
               

               Cow position:
               chr15:38827428-38827169 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               201
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               134, 79
               

               Conread position:
               58-354
               

               Cow position:
               chr15:16928202-16927891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               80, 19
               

               Conread position:
               58-373
               

               Cow position:
               chr15:52377447-52377757 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               231
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               133, 69
               

               Conread position:
               58-375
               

               Cow position:
               chr15:49273849-49274178 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 111
               

               Conread position:
               58-376
               

               Cow position:
               chr15:14576219-14576562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               80, 9
               

               Conread position:
               58-388
               

               Cow position:
               chr15:28823925-28823579 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               256
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               73, 37
               

               Conread position:
               58-401
               

               Cow position:
               chr15:4295647-4296020 (view UCSC Genome Browser custom track)
               

               Alignm length:
               378
               

               Alignm identity:
               275
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 19
               

               Conread position:
               58-463
               

               Cow position:
               chr15:16112281-16112725 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 248
               

               Conread position:
               58-463
               

               Cow position:
               chr15:17100817-17100394 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 158
               

               Conread position:
               58-463
               

               Cow position:
               chr15:21893666-21894102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 316
               

               Conread position:
               58-463
               

               Cow position:
               chr15:22532140-22532561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 211
               

               Conread position:
               58-463
               

               Cow position:
               chr15:22938880-22938457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               75, 237
               

               Conread position:
               58-463
               

               Cow position:
               chr15:27973319-27972895 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               98, 77
               

               Conread position:
               58-468
               

               Cow position:
               chr15:7429853-7430306 (view UCSC Genome Browser custom track)
               

               Alignm length:
               458
               

               Alignm identity:
               326
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 249
               

               Conread position:
               58-492
               

               Cow position:
               chr15:3572793-3572357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               449
               

               Alignm identity:
               286
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               69, 37
               

               Conread position:
               58-500
               

               Cow position:
               chr15:33624858-33625309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               466
               

               Alignm identity:
               318
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               48, 57
               

               Conread position:
               59-191
               

               Cow position:
               chr15:3591290-3591422 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               110
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               79, 36
               

               Conread position:
               59-222
               

               Cow position:
               chr15:40562795-40562617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               130
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               59-307
               

               Cow position:
               chr15:19920422-19920175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               174
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               75, 134
               

               Conread position:
               59-374
               

               Cow position:
               chr15:11987521-11987183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               68, 208
               

               Conread position:
               59-375
               

               Cow position:
               chr15:1502801-1503131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               69, 176
               

               Conread position:
               59-375
               

               Cow position:
               chr15:2380253-2380583 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               73, 177
               

               Conread position:
               59-414
               

               Cow position:
               chr15:38837634-38838015 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               71, 8
               

               Conread position:
               59-432
               

               Cow position:
               chr15:44658254-44658649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               281
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               76, 116
               

               Conread position:
               59-442
               

               Cow position:
               chr15:36259709-36259303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               410
               

               Alignm identity:
               284
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               72, 60
               

               Conread position:
               59-457
               

               Cow position:
               chr15:12170150-12170560 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               133, 68
               

               Conread position:
               59-462
               

               Cow position:
               chr15:39894504-39894897 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               269
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               120, 44
               

               Conread position:
               59-463
               

               Cow position:
               chr15:286360-286778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               310
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               69, 271
               

               Conread position:
               59-463
               

               Cow position:
               chr15:17084094-17084532 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 162
               

               Conread position:
               59-463
               

               Cow position:
               chr15:19771025-19771444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 227
               

               Conread position:
               59-463
               

               Cow position:
               chr15:21832556-21832104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               456
               

               Alignm identity:
               312
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               30, 64
               

               Conread position:
               59-463
               

               Cow position:
               chr15:21836598-21837009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               278
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               68, 15
               

               Conread position:
               59-463
               

               Cow position:
               chr15:22939436-22939013 (view UCSC Genome Browser custom track)
               

               Alignm length:
               433
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 227
               

               Conread position:
               59-463
               

               Cow position:
               chr15:30799785-30800202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               291
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               81, 158
               

               Conread position:
               59-463
               

               Cow position:
               chr15:45478887-45479327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               443
               

               Alignm identity:
               301
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               69, 244
               

               Conread position:
               59-467
               

               Cow position:
               chr15:19280187-19279769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               276
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               7, 198
               

               Conread position:
               59-470
               

               Cow position:
               chr15:30986398-30985955 (view UCSC Genome Browser custom track)
               

               Alignm length:
               455
               

               Alignm identity:
               305
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               89, 76
               

               Conread position:
               59-471
               

               Cow position:
               chr15:14870643-14871074 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               296
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               134, 59
               

               Conread position:
               59-475
               

               Cow position:
               chr15:46563589-46563152 (view UCSC Genome Browser custom track)
               

               Alignm length:
               452
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 94
               

               Conread position:
               59-577
               

               Cow position:
               chr15:4919182-4918597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               588
               

               Alignm identity:
               400
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               70, 229
               

               Conread position:
               60-222
               

               Cow position:
               chr15:31495329-31495158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               60-300
               

               Cow position:
               chr15:19942486-19942752 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               189
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               60-305
               

               Cow position:
               chr15:19742346-19742597 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               192
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               71, 28
               

               Conread position:
               60-367
               

               Cow position:
               chr15:662575-662250 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 230
               

               Conread position:
               60-369
               

               Cow position:
               chr15:10231854-10231521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               60-384
               

               Cow position:
               chr15:4418513-4418165 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 106
               

               Conread position:
               60-462
               

               Cow position:
               chr15:21608834-21608412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               431
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               67, 114
               

               Conread position:
               60-462
               

               Cow position:
               chr15:29026994-29026559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               438
               

               Alignm identity:
               290
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               86, 166
               

               Conread position:
               60-463
               

               Cow position:
               chr15:6227287-6226878 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               289
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               78, 32
               

               Conread position:
               60-463
               

               Cow position:
               chr15:6905428-6905861 (view UCSC Genome Browser custom track)
               

               Alignm length:
               435
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 222
               

               Conread position:
               60-463
               

               Cow position:
               chr15:19186734-19186295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               445
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 232
               

               Conread position:
               60-463
               

               Cow position:
               chr15:20482939-20482517 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               291
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               133, 12
               

               Conread position:
               60-463
               

               Cow position:
               chr15:31857478-31857912 (view UCSC Genome Browser custom track)
               

               Alignm length:
               440
               

               Alignm identity:
               321
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 57
               

               Conread position:
               60-463
               

               Cow position:
               chr15:42142762-42143173 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               305
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 130
               

               Conread position:
               60-463
               

               Cow position:
               chr15:44252273-44252683 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               82, 65
               

               Conread position:
               60-463
               

               Cow position:
               chr15:48851604-48851177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               437
               

               Alignm identity:
               292
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               70, 130
               

               Conread position:
               60-471
               

               Cow position:
               chr15:6462604-6462175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               436
               

               Alignm identity:
               313
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 96
               

               Conread position:
               60-471
               

               Cow position:
               chr15:40798529-40798099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               442
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               78, 37
               

               Conread position:
               60-577
               

               Cow position:
               chr15:20391388-20390827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 42
               

               Conread position:
               60-581
               

               Cow position:
               chr15:36643957-36643426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               541
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 35
               

               Conread position:
               62-461
               

               Cow position:
               chr15:17196036-17196463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               297
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               63, 179
               

               Conread position:
               63-222
               

               Cow position:
               chr15:11072306-11072135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 0
               

               Conread position:
               63-307
               

               Cow position:
               chr15:20047494-20047728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               127, 60
               

               Conread position:
               63-331
               

               Cow position:
               chr15:31042774-31043049 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               216
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               129, 64
               

               Conread position:
               63-423
               

               Cow position:
               chr15:38103963-38103610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               250
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               174, 66
               

               Conread position:
               63-426
               

               Cow position:
               chr15:244674-245057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               76, 41
               

               Conread position:
               63-462
               

               Cow position:
               chr15:1330217-1329780 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 238
               

               Conread position:
               63-463
               

               Cow position:
               chr15:21803773-21803337 (view UCSC Genome Browser custom track)
               

               Alignm length:
               439
               

               Alignm identity:
               302
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               72, 224
               

               Conread position:
               63-564
               

               Cow position:
               chr15:27863416-27862880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               545
               

               Alignm identity:
               355
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               62, 122
               

               Conread position:
               64-414
               

               Cow position:
               chr15:25906810-25907177 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               10, 80
               

               Conread position:
               64-439
               

               Cow position:
               chr15:11646566-11646193 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               116, 64
               

               Conread position:
               64-510
               

               Cow position:
               chr15:5420990-5420508 (view UCSC Genome Browser custom track)
               

               Alignm length:
               489
               

               Alignm identity:
               331
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               10, 279
               

               Conread position:
               65-191
               

               Cow position:
               chr15:14969412-14969541 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               107
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               65-396
               

               Cow position:
               chr15:16261224-16261558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               239
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               72, 201
               

               Conread position:
               65-457
               

               Cow position:
               chr15:10246101-10245693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 225
               

               Conread position:
               65-463
               

               Cow position:
               chr15:5571735-5571316 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               284
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               62, 30
               

               Conread position:
               65-463
               

               Cow position:
               chr15:20534559-20534129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 272
               

               Conread position:
               66-439
               

               Cow position:
               chr15:19119689-19119315 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               281
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 35
               

               Conread position:
               67-189
               

               Cow position:
               chr15:28206008-28206135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               100
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               67-191
               

               Cow position:
               chr15:40000822-40000949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               67-353
               

               Cow position:
               chr15:31929002-31928694 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 225
               

               Conread position:
               67-361
               

               Cow position:
               chr15:39326605-39326299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 60
               

               Conread position:
               67-364
               

               Cow position:
               chr15:51307774-51307464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               213
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               81, 70
               

               Conread position:
               67-409
               

               Cow position:
               chr15:85350-84986 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               263
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               64, 211
               

               Conread position:
               67-409
               

               Cow position:
               chr15:16667602-16667239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               371
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 137
               

               Conread position:
               67-421
               

               Cow position:
               chr15:32324312-32323927 (view UCSC Genome Browser custom track)
               

               Alignm length:
               389
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 248
               

               Conread position:
               67-431
               

               Cow position:
               chr15:2968230-2968621 (view UCSC Genome Browser custom track)
               

               Alignm length:
               397
               

               Alignm identity:
               290
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               61, 217
               

               Conread position:
               67-446
               

               Cow position:
               chr15:26573294-26573690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               412
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               125, 43
               

               Conread position:
               67-447
               

               Cow position:
               chr15:53037066-53036676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 212
               

               Conread position:
               67-452
               

               Cow position:
               chr15:36346690-36347078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               277
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               204, 59
               

               Conread position:
               67-453
               

               Cow position:
               chr15:47844192-47843797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               282
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               67-461
               

               Cow position:
               chr15:43827876-43827454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               428
               

               Alignm identity:
               295
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               68, 221
               

               Conread position:
               67-461
               

               Cow position:
               chr15:50177023-50177414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               407
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               67-462
               

               Cow position:
               chr15:10088215-10088633 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 220
               

               Conread position:
               67-462
               

               Cow position:
               chr15:15041532-15041116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               429
               

               Alignm identity:
               284
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               56, 223
               

               Conread position:
               67-463
               

               Cow position:
               chr15:5729852-5730257 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               31, 221
               

               Conread position:
               67-463
               

               Cow position:
               chr15:24967697-24968107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               89, 208
               

               Conread position:
               67-463
               

               Cow position:
               chr15:37644885-37645291 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               295
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               56, 272
               

               Conread position:
               67-468
               

               Cow position:
               chr15:52778628-52778204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               283
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               60, 252
               

               Conread position:
               67-471
               

               Cow position:
               chr15:14505341-14505754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               426
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               67-489
               

               Cow position:
               chr15:20081670-20082108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               450
               

               Alignm identity:
               304
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               36, 176
               

               Conread position:
               68-191
               

               Cow position:
               chr15:38820599-38820726 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               103
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               68-463
               

               Cow position:
               chr15:10570698-10570299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               280
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               127, 60
               

               Conread position:
               69-191
               

               Cow position:
               chr15:5710310-5710430 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               69-191
               

               Cow position:
               chr15:18704035-18703907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               69, 0
               

               Conread position:
               69-192
               

               Cow position:
               chr15:5691000-5691130 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               103
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               69-196
               

               Cow position:
               chr15:26851326-26851196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               131
               

               Alignm identity:
               106
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               59, 0
               

               Conread position:
               69-230
               

               Cow position:
               chr15:49784383-49784212 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               69-386
               

               Cow position:
               chr15:4179041-4178698 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 251
               

               Conread position:
               69-433
               

               Cow position:
               chr15:9971062-9970693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               384
               

               Alignm identity:
               266
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               123, 58
               

               Conread position:
               69-462
               

               Cow position:
               chr15:16603728-16604141 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 10
               

               Conread position:
               69-463
               

               Cow position:
               chr15:11011695-11011289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               285
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               70, 35
               

               Conread position:
               70-227
               

               Cow position:
               chr15:50674813-50674977 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               123
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               68, 0
               

               Conread position:
               70-468
               

               Cow position:
               chr15:21366291-21365872 (view UCSC Genome Browser custom track)
               

               Alignm length:
               427
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               90, 18
               

               Conread position:
               71-184
               

               Cow position:
               chr15:11635317-11635433 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               94
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               71-400
               

               Cow position:
               chr15:23572789-23572424 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 299
               

               Conread position:
               71-427
               

               Cow position:
               chr15:8427912-8428297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               395
               

               Alignm identity:
               271
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               69, 17
               

               Conread position:
               71-463
               

               Cow position:
               chr15:5235091-5234684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 36
               

               Conread position:
               71-463
               

               Cow position:
               chr15:30981852-30982236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               280
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               122, 33
               

               Conread position:
               72-222
               

               Cow position:
               chr15:48052697-48052539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               72-436
               

               Cow position:
               chr15:24031097-24031473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               390
               

               Alignm identity:
               255
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               12, 102
               

               Conread position:
               72-463
               

               Cow position:
               chr15:24797902-24797493 (view UCSC Genome Browser custom track)
               

               Alignm length:
               420
               

               Alignm identity:
               293
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               66, 90
               

               Conread position:
               72-471
               

               Cow position:
               chr15:26079445-26079043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               69, 190
               

               Conread position:
               72-579
               

               Cow position:
               chr15:17233087-17233649 (view UCSC Genome Browser custom track)
               

               Alignm length:
               568
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 217
               

               Conread position:
               73-251
               

               Cow position:
               chr15:37637349-37637524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               135
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               18, 124
               

               Conread position:
               73-376
               

               Cow position:
               chr15:7308256-7307925 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               228
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               52, 147
               

               Conread position:
               73-376
               

               Cow position:
               chr15:17337274-17337586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               317
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               66, 20
               

               Conread position:
               73-392
               

               Cow position:
               chr15:915949-915604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               26, 102
               

               Conread position:
               73-397
               

               Cow position:
               chr15:11559450-11559105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 22
               

               Conread position:
               73-440
               

               Cow position:
               chr15:44436659-44437030 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 31
               

               Conread position:
               73-460
               

               Cow position:
               chr15:3700381-3699965 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               297
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 296
               

               Conread position:
               73-461
               

               Cow position:
               chr15:1297648-1298055 (view UCSC Genome Browser custom track)
               

               Alignm length:
               415
               

               Alignm identity:
               316
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 15
               

               Conread position:
               73-461
               

               Cow position:
               chr15:33306022-33306425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               411
               

               Alignm identity:
               287
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               66, 30
               

               Conread position:
               73-462
               

               Cow position:
               chr15:49739114-49738728 (view UCSC Genome Browser custom track)
               

               Alignm length:
               398
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               151, 114
               

               Conread position:
               73-463
               

               Cow position:
               chr15:4485050-4485464 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               293
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 171
               

               Conread position:
               73-463
               

               Cow position:
               chr15:6647352-6647766 (view UCSC Genome Browser custom track)
               

               Alignm length:
               423
               

               Alignm identity:
               291
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               26, 146
               

               Conread position:
               73-472
               

               Cow position:
               chr15:31545428-31545021 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               268
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 93
               

               Conread position:
               73-472
               

               Cow position:
               chr15:31617086-31616676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               418
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               55, 97
               

               Conread position:
               74-221
               

               Cow position:
               chr15:27063614-27063457 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               127
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               65, 14
               

               Conread position:
               74-409
               

               Cow position:
               chr15:23275436-23275798 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               54, 170
               

               Conread position:
               74-460
               

               Cow position:
               chr15:26903096-26903511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 95
               

               Conread position:
               74-463
               

               Cow position:
               chr15:35112970-35112568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               414
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               68, 21
               

               Conread position:
               75-195
               

               Cow position:
               chr15:14572584-14572706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               101
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               75-458
               

               Cow position:
               chr15:45322708-45323099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               285
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               34, 65
               

               Conread position:
               75-463
               

               Cow position:
               chr15:34139895-34140301 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 17
               

               Conread position:
               76-411
               

               Cow position:
               chr15:21583022-21582652 (view UCSC Genome Browser custom track)
               

               Alignm length:
               374
               

               Alignm identity:
               257
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               52, 194
               

               Conread position:
               76-438
               

               Cow position:
               chr15:23696997-23696622 (view UCSC Genome Browser custom track)
               

               Alignm length:
               383
               

               Alignm identity:
               266
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               53, 110
               

               Conread position:
               78-457
               

               Cow position:
               chr15:12785336-12785750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               424
               

               Alignm identity:
               298
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               50, 10
               

               Conread position:
               78-457
               

               Cow position:
               chr15:28038698-28039070 (view UCSC Genome Browser custom track)
               

               Alignm length:
               391
               

               Alignm identity:
               266
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               78-457
               

               Cow position:
               chr15:52482922-52482513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               78-457
               

               Cow position:
               chr15:53163927-53164336 (view UCSC Genome Browser custom track)
               

               Alignm length:
               416
               

               Alignm identity:
               287
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               52, 91
               

               Conread position:
               78-573
               

               Cow position:
               chr15:2953226-2952690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               543
               

               Alignm identity:
               377
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 272
               

               Conread position:
               79-355
               

               Cow position:
               chr15:34284502-34284205 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 203
               

               Conread position:
               80-480
               

               Cow position:
               chr15:38394336-38394758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               425
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               47, 215
               

               Conread position:
               80-493
               

               Cow position:
               chr15:17762817-17763251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               441
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 221
               

               Conread position:
               81-463
               

               Cow position:
               chr15:8961933-8962320 (view UCSC Genome Browser custom track)
               

               Alignm length:
               400
               

               Alignm identity:
               267
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               79, 67
               

               Conread position:
               84-463
               

               Cow position:
               chr15:38806592-38806175 (view UCSC Genome Browser custom track)
               

               Alignm length:
               422
               

               Alignm identity:
               286
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               43, 211
               

               Conread position:
               90-360
               

               Cow position:
               chr15:50664551-50664274 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 179
               

               Conread position:
               93-463
               

               Cow position:
               chr15:32226944-32226566 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               272
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               39, 245
               

               Conread position:
               99-376
               

               Cow position:
               chr15:10512341-10512043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               34, 81
               

               Conread position:
               100-390
               

               Cow position:
               chr15:5726262-5726569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               229
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               43, 20
               

               Conread position:
               113-366
               

               Cow position:
               chr15:9781415-9781684 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               210
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               14, 161
               

               Conread position:
               113-371
               

               Cow position:
               chr15:43599141-43599408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               277
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               120-554
               

               Cow position:
               chr15:17353691-17353236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               322
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 165
               

               Conread position:
               121-229
               

               Cow position:
               chr15:34218953-34219063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               91
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               125-400
               

               Cow position:
               chr15:35945493-35945775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 12
               

               Conread position:
               127-313
               

               Cow position:
               chr15:14176536-14176334 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               161
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               12, 154
               

               Conread position:
               127-355
               

               Cow position:
               chr15:31560424-31560196 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               65, 143
               

               Conread position:
               127-400
               

               Cow position:
               chr15:12655952-12655657 (view UCSC Genome Browser custom track)
               

               Alignm length:
               299
               

               Alignm identity:
               215
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               66, 139
               

               Conread position:
               127-406
               

               Cow position:
               chr15:39316879-39316574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               231
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               13, 205
               

               Conread position:
               127-409
               

               Cow position:
               chr15:22871577-22871870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               224
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               12, 60
               

               Conread position:
               127-427
               

               Cow position:
               chr15:5044514-5044171 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               247
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               15, 31
               

               Conread position:
               127-457
               

               Cow position:
               chr15:42789185-42788840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               12, 165
               

               Conread position:
               127-463
               

               Cow position:
               chr15:5683113-5683454 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 147
               

               Conread position:
               127-463
               

               Cow position:
               chr15:13554315-13554661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 149
               

               Conread position:
               127-463
               

               Cow position:
               chr15:16583727-16583391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               127-463
               

               Cow position:
               chr15:29604737-29604397 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               22, 112
               

               Conread position:
               127-463
               

               Cow position:
               chr15:47042668-47042317 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               255
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               14, 167
               

               Conread position:
               128-339
               

               Cow position:
               chr15:35441114-35440884 (view UCSC Genome Browser custom track)
               

               Alignm length:
               231
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               128-460
               

               Cow position:
               chr15:24941398-24941069 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               241
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               12, 52
               

               Conread position:
               128-461
               

               Cow position:
               chr15:44640862-44641216 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               249
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               61, 17
               

               Conread position:
               128-463
               

               Cow position:
               chr15:50302148-50302506 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               12, 151
               

               Conread position:
               128-577
               

               Cow position:
               chr15:22095100-22095573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               487
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 40
               

               Conread position:
               129-435
               

               Cow position:
               chr15:2141338-2141003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               10, 86
               

               Conread position:
               129-480
               

               Cow position:
               chr15:50341086-50341453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 235
               

               Conread position:
               130-363
               

               Cow position:
               chr15:5929863-5930107 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               9, 116
               

               Conread position:
               130-376
               

               Cow position:
               chr15:29330972-29331231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               196
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               9, 229
               

               Conread position:
               130-460
               

               Cow position:
               chr15:10335724-10336072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               61, 180
               

               Conread position:
               130-461
               

               Cow position:
               chr15:32287774-32287440 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 131
               

               Conread position:
               130-463
               

               Cow position:
               chr15:41000103-40999738 (view UCSC Genome Browser custom track)
               

               Alignm length:
               370
               

               Alignm identity:
               270
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               62, 178
               

               Conread position:
               131-376
               

               Cow position:
               chr15:12870897-12870636 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               201
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               8, 145
               

               Conread position:
               132-463
               

               Cow position:
               chr15:16616161-16616514 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               272
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 102
               

               Conread position:
               132-471
               

               Cow position:
               chr15:22136660-22137010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               59, 5
               

               Conread position:
               133-459
               

               Cow position:
               chr15:15573865-15573504 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               254
               

               Alignm E-value:
               9e-32
               

               Alignm gaps (pig, cow):
               60, 155
               

               Conread position:
               133-468
               

               Cow position:
               chr15:21389194-21388839 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               6, 15
               

               Conread position:
               133-468
               

               Cow position:
               chr15:30047576-30047211 (view UCSC Genome Browser custom track)
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               6, 19
               

               Conread position:
               136-463
               

               Cow position:
               chr15:46868741-46868393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               56, 49
               

               Conread position:
               136-511
               

               Cow position:
               chr15:10457040-10456644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               401
               

               Alignm identity:
               270
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               17, 120
               

               Conread position:
               137-351
               

               Cow position:
               chr15:43788236-43788455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               225
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 76
               

               Conread position:
               137-425
               

               Cow position:
               chr15:7535681-7535386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               56, 93
               

               Conread position:
               137-463
               

               Cow position:
               chr15:6530874-6530523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               56, 218
               

               Conread position:
               137-463
               

               Cow position:
               chr15:34207213-34206877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 225
               

               Conread position:
               137-463
               

               Cow position:
               chr15:39621312-39621658 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 264
               

               Conread position:
               137-467
               

               Cow position:
               chr15:16307395-16307740 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               7, 49
               

               Conread position:
               137-502
               

               Cow position:
               chr15:41418855-41418459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               399
               

               Alignm identity:
               281
               

               Alignm E-value:
               4.06377e-44
               

               Alignm gaps (pig, cow):
               29, 147
               

               Conread position:
               137-581
               

               Cow position:
               chr15:10737756-10737309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               459
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 37
               

               Conread position:
               138-428
               

               Cow position:
               chr15:45584708-45585010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               313
               

               Alignm identity:
               228
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               54, 132
               

               Conread position:
               138-462
               

               Cow position:
               chr15:22168047-22168377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               230
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               55, 114
               

               Conread position:
               139-461
               

               Cow position:
               chr15:33976719-33976375 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               252
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               54, 181
               

               Conread position:
               140-397
               

               Cow position:
               chr15:10608328-10608054 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               142-394
               

               Cow position:
               chr15:10660576-10660307 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               197
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               51, 225
               

               Conread position:
               144-471
               

               Cow position:
               chr15:45216820-45217148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               230
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               46, 88
               

               Conread position:
               145-463
               

               Cow position:
               chr15:23768275-23767945 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               46, 130
               

               Conread position:
               147-463
               

               Cow position:
               chr15:20351816-20352154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               45, 128
               

               Conread position:
               149-463
               

               Cow position:
               chr15:26404269-26404589 (view UCSC Genome Browser custom track)
               

               Alignm length:
               331
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               44, 82
               

               Conread position:
               155-463
               

               Cow position:
               chr15:4534903-4535227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 235
               

               Conread position:
               163-409
               

               Cow position:
               chr15:12441811-12441561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               53, 28
               

               Conread position:
               176-463
               

               Cow position:
               chr15:33680673-33680968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               199
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               178-457
               

               Cow position:
               chr15:51633008-51632736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               28, 70
               

               Conread position:
               183-461
               

               Cow position:
               chr15:45377-45097 (view UCSC Genome Browser custom track)
               

               Alignm length:
               288
               

               Alignm identity:
               199
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 9
               

               Conread position:
               185-448
               

               Cow position:
               chr15:37777388-37777656 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               191
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               29, 7
               

               Conread position:
               191-462
               

               Cow position:
               chr15:31949038-31949319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               196
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               25, 14
               

               Conread position:
               191-463
               

               Cow position:
               chr15:5498984-5498709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               194-396
               

               Cow position:
               chr15:16904667-16904876 (view UCSC Genome Browser custom track)
               

               Alignm length:
               212
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               30, 89
               

               Conread position:
               196-462
               

               Cow position:
               chr15:25667172-25666904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               29, 71
               

               Conread position:
               196-463
               

               Cow position:
               chr15:11629837-11629562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               37, 162
               

               Conread position:
               197-471
               

               Cow position:
               chr15:18206472-18206184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               27, 93
               

               Conread position:
               199-437
               

               Cow position:
               chr15:51898281-51898525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               26, 68
               

               Conread position:
               199-462
               

               Cow position:
               chr15:27280924-27281183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               26, 53
               

               Conread position:
               205-409
               

               Cow position:
               chr15:53045820-53045616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               154
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               205-461
               

               Cow position:
               chr15:35417566-35417303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               30, 18
               

               Conread position:
               205-463
               

               Cow position:
               chr15:47843192-47842938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               199
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               20, 90
               

               Conread position:
               206-463
               

               Cow position:
               chr15:6657157-6657426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               207-469
               

               Cow position:
               chr15:2668966-2669230 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               188
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               20, 55
               

               Conread position:
               213-353
               

               Cow position:
               chr15:35205081-35204943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               144
               

               Alignm identity:
               113
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               10, 47
               

               Conread position:
               213-463
               

               Cow position:
               chr15:20725549-20725295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               213-463
               

               Cow position:
               chr15:23568060-23567806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               189
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               14, 50
               

               Conread position:
               213-463
               

               Cow position:
               chr15:26702009-26701756 (view UCSC Genome Browser custom track)
               

               Alignm length:
               260
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               15, 28
               

               Conread position:
               214-468
               

               Cow position:
               chr15:13515432-13515697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               9, 70
               

               Conread position:
               218-462
               

               Cow position:
               chr15:42415332-42415577 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               138, 7
               

               Conread position:
               220-462
               

               Cow position:
               chr15:23775866-23775642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               13, 44
               

               Conread position:
               222-385
               

               Cow position:
               chr15:43673859-43673699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               125
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               222-463
               

               Cow position:
               chr15:363100-363338 (view UCSC Genome Browser custom track)
               

               Alignm length:
               250
               

               Alignm identity:
               180
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               11, 92
               

               Conread position:
               222-463
               

               Cow position:
               chr15:26421527-26421277 (view UCSC Genome Browser custom track)
               

               Alignm length:
               254
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               10, 76
               

               Conread position:
               222-468
               

               Cow position:
               chr15:47280064-47279826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               183
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               12, 44
               

               Conread position:
               222-469
               

               Cow position:
               chr15:35839014-35838763 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               182
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               13, 37
               

               Conread position:
               222-501
               

               Cow position:
               chr15:5632761-5633029 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               10, 42
               

               Conread position:
               222-577
               

               Cow position:
               chr15:17261085-17260701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               261
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               12, 37
               

               Conread position:
               223-346
               

               Cow position:
               chr15:29861398-29861523 (view UCSC Genome Browser custom track)
               

               Alignm length:
               126
               

               Alignm identity:
               104
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               223-376
               

               Cow position:
               chr15:36725100-36724952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               223-463
               

               Cow position:
               chr15:50957724-50957475 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               11, 33
               

               Conread position:
               224-395
               

               Cow position:
               chr15:37749272-37749099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               132, 45
               

               Conread position:
               224-409
               

               Cow position:
               chr15:17859151-17858974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               154, 33
               

               Conread position:
               224-409
               

               Cow position:
               chr15:38898502-38898685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               132, 37
               

               Conread position:
               224-428
               

               Cow position:
               chr15:16657570-16657775 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               123, 46
               

               Conread position:
               224-434
               

               Cow position:
               chr15:4350524-4350309 (view UCSC Genome Browser custom track)
               

               Alignm length:
               224
               

               Alignm identity:
               175
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               40, 91
               

               Conread position:
               224-434
               

               Cow position:
               chr15:28464227-28464012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               124, 33
               

               Conread position:
               224-436
               

               Cow position:
               chr15:34145075-34144862 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               176
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 32
               

               Conread position:
               224-439
               

               Cow position:
               chr15:23114915-23115131 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               51, 156
               

               Conread position:
               224-453
               

               Cow position:
               chr15:52740047-52739811 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               36, 69
               

               Conread position:
               224-457
               

               Cow position:
               chr15:10845798-10846036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               183
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               125, 45
               

               Conread position:
               224-461
               

               Cow position:
               chr15:236814-237046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 54
               

               Conread position:
               224-462
               

               Cow position:
               chr15:25585011-25584770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               153, 59
               

               Conread position:
               224-462
               

               Cow position:
               chr15:28126966-28126730 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               175, 25
               

               Conread position:
               224-462
               

               Cow position:
               chr15:32204820-32204584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               166
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               40, 22
               

               Conread position:
               224-463
               

               Cow position:
               chr15:1777045-1776818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               37, 86
               

               Conread position:
               224-463
               

               Cow position:
               chr15:4501065-4501300 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               183
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               42, 68
               

               Conread position:
               224-463
               

               Cow position:
               chr15:6046237-6045993 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               50, 69
               

               Conread position:
               224-463
               

               Cow position:
               chr15:13684189-13683964 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               183
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               224-463
               

               Cow position:
               chr15:22751531-22751771 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               173
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               129, 37
               

               Conread position:
               224-463
               

               Cow position:
               chr15:41620112-41619866 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               189
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               78, 33
               

               Conread position:
               224-463
               

               Cow position:
               chr15:53680681-53680448 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               183
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               154, 36
               

               Conread position:
               224-464
               

               Cow position:
               chr15:53353469-53353231 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               186, 16
               

               Conread position:
               224-467
               

               Cow position:
               chr15:47274453-47274697 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               170
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               154, 37
               

               Conread position:
               224-469
               

               Cow position:
               chr15:52380367-52380617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               224-557
               

               Cow position:
               chr15:23927395-23927047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 83
               

               Conread position:
               224-581
               

               Cow position:
               chr15:37716854-37716472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               385
               

               Alignm identity:
               270
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               47, 38
               

               Conread position:
               225-347
               

               Cow position:
               chr15:12359118-12359235 (view UCSC Genome Browser custom track)
               

               Alignm length:
               123
               

               Alignm identity:
               98
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               225-463
               

               Cow position:
               chr15:9871337-9871090 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               185
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               46, 124
               

               Conread position:
               225-463
               

               Cow position:
               chr15:9928439-9928678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               152, 32
               

               Conread position:
               225-463
               

               Cow position:
               chr15:16936768-16936537 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               36, 104
               

               Conread position:
               225-463
               

               Cow position:
               chr15:36782245-36782012 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               164, 37
               

               Conread position:
               225-463
               

               Cow position:
               chr15:40009574-40009330 (view UCSC Genome Browser custom track)
               

               Alignm length:
               246
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 124
               

               Conread position:
               225-463
               

               Cow position:
               chr15:41225483-41225243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               19, 14
               

               Conread position:
               225-469
               

               Cow position:
               chr15:46611012-46611245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               40, 0
               

               Conread position:
               225-477
               

               Cow position:
               chr15:14856387-14856144 (view UCSC Genome Browser custom track)
               

               Alignm length:
               256
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               124, 41
               

               Conread position:
               225-498
               

               Cow position:
               chr15:30820757-30820477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               55, 33
               

               Conread position:
               225-540
               

               Cow position:
               chr15:37632804-37632477 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               45, 26
               

               Conread position:
               225-543
               

               Cow position:
               chr15:47105121-47105444 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 102
               

               Conread position:
               226-446
               

               Cow position:
               chr15:39436295-39436513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               166
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               12, 16
               

               Conread position:
               228-477
               

               Cow position:
               chr15:20401830-20401580 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               25, 100
               

               Conread position:
               229-445
               

               Cow position:
               chr15:9622273-9622494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               228
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               127, 33
               

               Conread position:
               229-463
               

               Cow position:
               chr15:13387160-13387403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               189
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               37, 120
               

               Conread position:
               229-463
               

               Cow position:
               chr15:36422742-36422976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               33, 43
               

               Conread position:
               230-441
               

               Cow position:
               chr15:23598227-23598010 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               126, 27
               

               Conread position:
               230-462
               

               Cow position:
               chr15:6331954-6331739 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               40, 27
               

               Conread position:
               230-463
               

               Cow position:
               chr15:44256562-44256797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               148, 31
               

               Conread position:
               230-463
               

               Cow position:
               chr15:53402906-53402678 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               148, 36
               

               Conread position:
               230-471
               

               Cow position:
               chr15:24038318-24038082 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               168
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               5, 85
               

               Conread position:
               230-579
               

               Cow position:
               chr15:15881011-15881385 (view UCSC Genome Browser custom track)
               

               Alignm length:
               379
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 54
               

               Conread position:
               231-375
               

               Cow position:
               chr15:31502717-31502576 (view UCSC Genome Browser custom track)
               

               Alignm length:
               145
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               231-409
               

               Cow position:
               chr15:38877218-38877043 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               129
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               147, 76
               

               Conread position:
               231-457
               

               Cow position:
               chr15:16639872-16640098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               147, 33
               

               Conread position:
               231-461
               

               Cow position:
               chr15:36621495-36621736 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               190
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               231-462
               

               Cow position:
               chr15:24045013-24044779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               172
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               15, 7
               

               Conread position:
               231-463
               

               Cow position:
               chr15:6586631-6586393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               147, 49
               

               Conread position:
               231-463
               

               Cow position:
               chr15:15708028-15707800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               38, 118
               

               Conread position:
               231-465
               

               Cow position:
               chr15:52611393-52611635 (view UCSC Genome Browser custom track)
               

               Alignm length:
               244
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               147, 118
               

               Conread position:
               231-472
               

               Cow position:
               chr15:40343330-40343578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               33, 155
               

               Conread position:
               231-581
               

               Cow position:
               chr15:7750051-7749676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               381
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               38, 80
               

               Conread position:
               233-461
               

               Cow position:
               chr15:21522874-21523108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               237
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               145, 37
               

               Conread position:
               233-462
               

               Cow position:
               chr15:11363088-11362863 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               184
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               144, 24
               

               Conread position:
               233-465
               

               Cow position:
               chr15:25825769-25825536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               55, 89
               

               Conread position:
               234-467
               

               Cow position:
               chr15:25111083-25110840 (view UCSC Genome Browser custom track)
               

               Alignm length:
               245
               

               Alignm identity:
               172
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               32, 60
               

               Conread position:
               235-463
               

               Cow position:
               chr15:12316016-12316244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               183
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               143, 34
               

               Conread position:
               235-463
               

               Cow position:
               chr15:23487078-23486853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               143, 42
               

               Conread position:
               235-463
               

               Cow position:
               chr15:29340153-29340382 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               144, 75
               

               Conread position:
               239-581
               

               Cow position:
               chr15:11658480-11658116 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               43, 60
               

               Conread position:
               240-457
               

               Cow position:
               chr15:4093838-4093610 (view UCSC Genome Browser custom track)
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               138, 17
               

               Conread position:
               243-463
               

               Cow position:
               chr15:33605028-33605241 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               32, 48
               

               Conread position:
               247-457
               

               Cow position:
               chr15:33678802-33679009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               158
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               251-461
               

               Cow position:
               chr15:41583015-41583228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               216
               

               Alignm identity:
               168
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               251-577
               

               Cow position:
               chr15:29792806-29792463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               127, 52
               

               Conread position:
               252-463
               

               Cow position:
               chr15:9072323-9072113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 14
               

               Conread position:
               254-579
               

               Cow position:
               chr15:9178101-9177762 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               240
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               64, 16
               

               Conread position:
               255-461
               

               Cow position:
               chr15:43248662-43248453 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               77, 6
               

               Conread position:
               255-579
               

               Cow position:
               chr15:38846211-38846552 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               102, 48
               

               Conread position:
               257-462
               

               Cow position:
               chr15:34104379-34104585 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               152
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               23, 140
               

               Conread position:
               257-468
               

               Cow position:
               chr15:144125-143906 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               165
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               94, 23
               

               Conread position:
               261-462
               

               Cow position:
               chr15:23791569-23791776 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               8, 132
               

               Conread position:
               265-463
               

               Cow position:
               chr15:23702893-23703093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               127, 15
               

               Conread position:
               268-462
               

               Cow position:
               chr15:15025528-15025723 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               62, 81
               

               Conread position:
               268-463
               

               Cow position:
               chr15:7827917-7827717 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               110, 132
               

               Conread position:
               268-463
               

               Cow position:
               chr15:23332755-23332561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               110, 43
               

               Conread position:
               273-463
               

               Cow position:
               chr15:53183452-53183259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               274-463
               

               Cow position:
               chr15:9267930-9267743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               153
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               14, 74
               

               Conread position:
               274-463
               

               Cow position:
               chr15:24128777-24128969 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               104, 76
               
UCSC Genome Browser
               Conread position:
               274-577
               

               Cow position:
               chr15:7883221-7882900 (view  custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               222
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               104, 49
               
UCSC Genome Browser
               
               
               
Conread position: 278-459

               
               
               
Cow position: chr15:43765658-43765850 (view  custom track)

               
               
               
Alignm length: 193

               
               
               
Alignm identity: 140

               
               
               
Alignm E-value: 1e-24

               
               
               
Alignm gaps (pig, cow): 75, 0
UCSC Genome Browser
               
               
               
Conread position: 280-463

               
               
               
Cow position: chr15:6082511-6082322 (view  custom track)

               
               
               
Alignm length: 192

               
               
               
Alignm identity: 143

               
               
               
Alignm E-value: 2e-27

               
               
               
Alignm gaps (pig, cow): 19, 38

               
               
               Conread position:280-463
               
               
               Cow position:chr15:51831465-51831272 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:195
               
               
               Alignm identity:140
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):74, 67

               
               
               Conread position:283-477
               
               
               Cow position:chr15:14259791-14259601 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:196
               
               
               Alignm identity:141
               
               
               Alignm E-value:5e-27
               
               
               Alignm gaps (pig, cow):74, 28

               
               
               Conread position:293-463
               
               
               Cow position:chr15:9062451-9062274 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:180
               
               
               Alignm identity:134
               
               
               Alignm E-value:4e-25
               
               
               Alignm gaps (pig, cow):86, 57

               
               
               Conread position:293-468
               
               
               Cow position:chr15:16786819-16786987 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:176
               
               
               Alignm identity:127
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):35, 0

               
               
               Conread position:295-554
               
               
               Cow position:chr15:52683317-52683577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:267
               
               
               Alignm identity:193
               
               
               Alignm E-value:2e-36
               
               
               Alignm gaps (pig, cow):83, 45

               
               
               Conread position:300-463
               
               
               Cow position:chr15:240994-241167 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:174
               
               
               Alignm identity:132
               
               
               Alignm E-value:2e-26
               
               
               Alignm gaps (pig, cow):59, 0

               
               
               Conread position:305-461
               
               
               Cow position:chr15:36390576-36390726 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:159
               
               
               Alignm identity:119
               
               
               Alignm E-value:9e-22
               
               
               Alignm gaps (pig, cow):102, 44

               
               
               Conread position:310-463
               
               
               Cow position:chr15:18284399-18284562 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:164
               
               
               Alignm identity:123
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):49, 0

               
               
               Conread position:311-578
               
               
               Cow position:chr15:38683373-38683664 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:292
               
               
               Alignm identity:215
               
               
               Alignm E-value:8.00001e-41
               
               
               Alignm gaps (pig, cow):41, 0

               
               
               Conread position:313-463
               
               
               Cow position:chr15:18605555-18605704 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:154
               
               
               Alignm identity:116
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):39, 87

               
               
               Conread position:314-463
               
               
               Cow position:chr15:31085702-31085854 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:153
               
               
               Alignm identity:119
               
               
               Alignm E-value:7e-29
               
               
               Alignm gaps (pig, cow):89, 0

               
               
               Conread position:316-463
               
               
               Cow position:chr15:12063496-12063650 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:155
               
               
               Alignm identity:119
               
               
               Alignm E-value:4e-24
               
               
               Alignm gaps (pig, cow):37, 0

               
               
               Conread position:317-468
               
               
               Cow position:chr15:34284192-34284037 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:157
               
               
               Alignm identity:116
               
               
               Alignm E-value:8e-21
               
               
               Alignm gaps (pig, cow):43, 129

               
               
               Conread position:319-471
               
               
               Cow position:chr15:13669731-13669577 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:118
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):59, 30

               
               
               Conread position:348-496
               
               
               Cow position:chr15:10450706-10450549 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:158
               
               
               Alignm identity:117
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:350-465
               
               
               Cow position:chr15:29542198-29542320 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:123
               
               
               Alignm identity:100
               
               
               Alignm E-value:3e-21
               
               
               Alignm gaps (pig, cow):29, 0

               
               
               Conread position:463-576
               
               
               Cow position:chr15:25208418-25208305 (view  custom track)UCSC Genome Browser
               
               
               Alignm length:114
               
               
               Alignm identity:90
               
               
               Alignm E-value:3e-22
               
               
               Alignm gaps (pig, cow):0, 0
Show alignments to all cow chromosomes.
Conread position:	21-307
Cow position:	chr15:32977975-32977685 (view UCSC Genome Browser custom track)
Alignm length:	305
Alignm identity:	211
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	171, 11
Conread position:	38-303
Cow position:	chr15:3695504-3695790 (view UCSC Genome Browser custom track)
Alignm length:	289
Alignm identity:	203
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	90, 119
Conread position:	39-463
Cow position:	chr15:26158727-26158297 (view UCSC Genome Browser custom track)
Alignm length:	444
Alignm identity:	315
Alignm E-value:	0
Alignm gaps (pig, cow):	94, 25
Conread position:	40-198
Cow position:	chr15:906770-906609 (view UCSC Genome Browser custom track)
Alignm length:	164
Alignm identity:	120
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	87, 136
Conread position:	42-581
Cow position:	chr15:47821704-47822253 (view UCSC Genome Browser custom track)
Alignm length:	569
Alignm identity:	408
Alignm E-value:	0
Alignm gaps (pig, cow):	27, 10
Conread position:	43-348
Cow position:	chr15:23780201-23779871 (view UCSC Genome Browser custom track)
Alignm length:	334
Alignm identity:	229
Alignm E-value:	2e-28
Alignm gaps (pig, cow):	13, 250
Conread position:	44-460
Cow position:	chr15:16543563-16543147 (view UCSC Genome Browser custom track)
Alignm length:	437
Alignm identity:	299
Alignm E-value:	6e-38
Alignm gaps (pig, cow):	145, 5
Conread position:	45-200
Cow position:	chr15:47773606-47773454 (view UCSC Genome Browser custom track)
Alignm length:	157
Alignm identity:	119
Alignm E-value:	1e-25
Alignm gaps (pig, cow):	147, 85
Conread position:	45-461
Cow position:	chr15:39599321-39599758 (view UCSC Genome Browser custom track)
Alignm length:	449
Alignm identity:	332
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 52
Conread position:	46-191
Cow position:	chr15:52629243-52629096 (view UCSC Genome Browser custom track)
Alignm length:	150
Alignm identity:	113
Alignm E-value:	3e-21
Alignm gaps (pig, cow):	21, 117
Conread position:	46-222
Cow position:	chr15:36621276-36621461 (view UCSC Genome Browser custom track)
Alignm length:	189
Alignm identity:	137
Alignm E-value:	8e-21
Alignm gaps (pig, cow):	87, 21
Conread position:	46-287
Cow position:	chr15:36388174-36388432 (view UCSC Genome Browser custom track)
Alignm length:	263
Alignm identity:	189
Alignm E-value:	2e-30
Alignm gaps (pig, cow):	91, 40
Conread position:	46-376
Cow position:	chr15:20422890-20422551 (view UCSC Genome Browser custom track)
Alignm length:	347
Alignm identity:	254
Alignm E-value:	0
Alignm gaps (pig, cow):	112, 39
Conread position:	46-503
Cow position:	chr15:8230668-8230221 (view UCSC Genome Browser custom track)
Alignm length:	472
Alignm identity:	307
Alignm E-value:	7e-30
Alignm gaps (pig, cow):	82, 7
Conread position:	47-191
Cow position:	chr15:10199211-10199358 (view UCSC Genome Browser custom track)
Alignm length:	151
Alignm identity:	118
Alignm E-value:	4e-25
Alignm gaps (pig, cow):	92, 5
Conread position:	47-432
Cow position:	chr15:5535653-5536039 (view UCSC Genome Browser custom track)
Alignm length:	398
Alignm identity:	276
Alignm E-value:	0
Alignm gaps (pig, cow):	6, 26
Conread position:	48-463
Cow position:	chr15:16822828-16823257 (view UCSC Genome Browser custom track)
Alignm length:	435
Alignm identity:	305
Alignm E-value:	0
Alignm gaps (pig, cow):	142, 19
Conread position:	48-577
Cow position:	chr15:6969865-6970440 (view UCSC Genome Browser custom track)
Alignm length:	589
Alignm identity:	424
Alignm E-value:	0
Alignm gaps (pig, cow):	20, 28
Conread position:	49-191
Cow position:	chr15:49422105-49421966 (view UCSC Genome Browser custom track)
Alignm length:	144
Alignm identity:	118
Alignm E-value:	8e-31
Alignm gaps (pig, cow):	23, 82
Conread position:	49-212
Cow position:	chr15:18941912-18942085 (view UCSC Genome Browser custom track)
Alignm length:	174
Alignm identity:	131
Alignm E-value:	5e-26
Alignm gaps (pig, cow):	69, 0