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Cow genome map

           
Conread name:
           
rpigcf0_017685.y1
        

               
Conread position:
               
34-191
               

               
Cow position:
               
chr18:47458847-47459005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
37-222
               

               
Cow position:
               
chr18:4530745-4530550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
43-463
               

               
Cow position:
               
chr18:55120050-55119611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
102, 10
               

               
Conread position:
               
44-446
               

               
Cow position:
               
chr18:32883474-32883055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 8
               

               
Conread position:
               
46-222
               

               
Cow position:
               
chr18:17195165-17195354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
46-320
               

               
Cow position:
               
chr18:12584663-12584960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
46-355
               

               
Cow position:
               
chr18:36768632-36768956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
10, 234
               

               
Conread position:
               
46-463
               

               
Cow position:
               
chr18:7487416-7486989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 158
               

               
Conread position:
               
46-465
               

               
Cow position:
               
chr18:16043969-16044419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
47-462
               

               
Cow position:
               
chr18:4489721-4490136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
87, 206
               

               
Conread position:
               
48-190
               

               
Cow position:
               
chr18:21050910-21051054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
48-220
               

               
Cow position:
               
chr18:51395715-51395892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
143, 98
               

               
Conread position:
               
48-436
               

               
Cow position:
               
chr18:42479404-42479828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
72, 7
               

               
Conread position:
               
49-136
               

               
Cow position:
               
chr18:3085329-3085416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
88
               

               
Alignm identity:
               
77
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
49-189
               

               
Cow position:
               
chr18:34490459-34490311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
49-190
               

               
Cow position:
               
chr18:21187477-21187335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
49-211
               

               
Cow position:
               
chr18:47175200-47175379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
49-222
               

               
Cow position:
               
chr18:31159094-31159282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
80, 54
               

               
Conread position:
               
49-270
               

               
Cow position:
               
chr18:45558321-45558084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
49-347
               

               
Cow position:
               
chr18:54130164-54130477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
47, 57
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr18:1571061-1571388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 251
               

               
Conread position:
               
49-391
               

               
Cow position:
               
chr18:46276121-46276498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
49-417
               

               
Cow position:
               
chr18:47812616-47812253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
111, 24
               

               
Conread position:
               
49-457
               

               
Cow position:
               
chr18:33502208-33502635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
49-463
               

               
Cow position:
               
chr18:22120705-22121145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
49-463
               

               
Cow position:
               
chr18:45903719-45904155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 19
               

               
Conread position:
               
49-463
               

               
Cow position:
               
chr18:51405739-51406166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 43
               

               
Conread position:
               
50-256
               

               
Cow position:
               
chr18:4851308-4851532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
83, 43
               

               
Conread position:
               
50-354
               

               
Cow position:
               
chr18:29474914-29474591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
73, 17
               

               
Conread position:
               
50-437
               

               
Cow position:
               
chr18:44493329-44493708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
140, 16
               

               
Conread position:
               
51-157
               

               
Cow position:
               
chr18:37160422-37160527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
107
               

               
Alignm identity:
               
86
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
51-192
               

               
Cow position:
               
chr18:46880531-46880678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
80, 117
               

               
Conread position:
               
51-212
               

               
Cow position:
               
chr18:21969625-21969804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
51-395
               

               
Cow position:
               
chr18:38669647-38669995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
90, 198
               

               
Conread position:
               
51-461
               

               
Cow position:
               
chr18:52637351-52637789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 225
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr18:6275985-6275553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 118
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr18:7966420-7966000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 45
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr18:43822777-43823216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
76, 123
               

               
Conread position:
               
51-465
               

               
Cow position:
               
chr18:34324792-34325225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
110, 45
               

               
Conread position:
               
51-465
               

               
Cow position:
               
chr18:55692994-55692556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 70
               

               
Conread position:
               
51-471
               

               
Cow position:
               
chr18:29796273-29796696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 15
               

               
Conread position:
               
52-369
               

               
Cow position:
               
chr18:3267615-3267292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
52-411
               

               
Cow position:
               
chr18:3209895-3209504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
14, 116
               

               
Conread position:
               
53-192
               

               
Cow position:
               
chr18:11814473-11814331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
53-222
               

               
Cow position:
               
chr18:28822589-28822761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
131, 81
               

               
Conread position:
               
53-266
               

               
Cow position:
               
chr18:47125238-47125463 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
139, 81
               

               
Conread position:
               
53-347
               

               
Cow position:
               
chr18:9846245-9846540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
136, 86
               

               
Conread position:
               
53-375
               

               
Cow position:
               
chr18:8170916-8171255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
6, 314
               

               
Conread position:
               
53-448
               

               
Cow position:
               
chr18:42431918-42432336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
86, 318
               

               
Conread position:
               
53-458
               

               
Cow position:
               
chr18:22055685-22056112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
10, 261
               

               
Conread position:
               
53-471
               

               
Cow position:
               
chr18:9010878-9010462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 14
               

               
Conread position:
               
53-529
               

               
Cow position:
               
chr18:5578469-5577968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 124
               

               
Conread position:
               
54-201
               

               
Cow position:
               
chr18:32243567-32243714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
83, 108
               

               
Conread position:
               
54-203
               

               
Cow position:
               
chr18:135489-135639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
81, 12
               

               
Conread position:
               
54-220
               

               
Cow position:
               
chr18:38937992-38937814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
54-298
               

               
Cow position:
               
chr18:51867382-51867645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
54-340
               

               
Cow position:
               
chr18:25006333-25006625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
138, 87
               

               
Conread position:
               
55-157
               

               
Cow position:
               
chr18:2097052-2097154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
83
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
55-194
               

               
Cow position:
               
chr18:48290066-48290202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
55-196
               

               
Cow position:
               
chr18:641144-641289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 14
               

               
Conread position:
               
55-229
               

               
Cow position:
               
chr18:50632273-50632458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
55-237
               

               
Cow position:
               
chr18:47868768-47868588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
136, 91
               

               
Conread position:
               
55-255
               

               
Cow position:
               
chr18:1735426-1735636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
55-255
               

               
Cow position:
               
chr18:29390038-29390243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
74, 38
               

               
Conread position:
               
55-259
               

               
Cow position:
               
chr18:51192576-51192798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
87, 37
               

               
Conread position:
               
55-376
               

               
Cow position:
               
chr18:43555341-43555696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 238
               

               
Conread position:
               
55-376
               

               
Cow position:
               
chr18:52478319-52477979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
22, 296
               

               
Conread position:
               
55-400
               

               
Cow position:
               
chr18:7414862-7415221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 205
               

               
Conread position:
               
55-460
               

               
Cow position:
               
chr18:12023467-12023893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
83, 113
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr18:3180582-3180157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 230
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr18:4884347-4884778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
76, 116
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr18:14586307-14586739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 77
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr18:15613692-15614111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 227
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr18:28101806-28101363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 141
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr18:29372042-29371606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 235
               

               
Conread position:
               
55-468
               

               
Cow position:
               
chr18:10954636-10954206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
83, 304
               

               
Conread position:
               
55-476
               

               
Cow position:
               
chr18:46048926-46048486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 185
               

               
Conread position:
               
55-494
               

               
Cow position:
               
chr18:12059166-12058723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 218
               

               
Conread position:
               
55-581
               

               
Cow position:
               
chr18:11867510-11866946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
423
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 233
               

               
Conread position:
               
56-170
               

               
Cow position:
               
chr18:15025874-15025762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
116
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
56-177
               

               
Cow position:
               
chr18:21410857-21410728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 121
               

               
Conread position:
               
56-183
               

               
Cow position:
               
chr18:18722242-18722112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 65
               

               
Conread position:
               
56-190
               

               
Cow position:
               
chr18:25139732-25139589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:2793805-2793943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:16417326-16417467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
71, 123
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:25598062-25598204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:33492518-33492388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:34444566-34444708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:42967275-42967140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
82, 39
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:49602871-49603015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:50004535-50004677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr18:51383227-51383369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
56-194
               

               
Cow position:
               
chr18:49110412-49110276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
130, 108
               

               
Conread position:
               
56-211
               

               
Cow position:
               
chr18:36500911-36501076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
56-218
               

               
Cow position:
               
chr18:8208252-8208430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
56-222
               

               
Cow position:
               
chr18:19809512-19809691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
56-222
               

               
Cow position:
               
chr18:45897898-45897723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 110
               

               
Conread position:
               
56-223
               

               
Cow position:
               
chr18:24946251-24946077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
85, 122
               

               
Conread position:
               
56-228
               

               
Cow position:
               
chr18:35857753-35857939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
56-233
               

               
Cow position:
               
chr18:56463557-56463750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
56-246
               

               
Cow position:
               
chr18:29264194-29264383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
82, 112
               

               
Conread position:
               
56-247
               

               
Cow position:
               
chr18:18569148-18568957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr18:44909223-44908985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
56-269
               

               
Cow position:
               
chr18:52251683-52251923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
74, 229
               

               
Conread position:
               
56-290
               

               
Cow position:
               
chr18:19868087-19868350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
77, 121
               

               
Conread position:
               
56-297
               

               
Cow position:
               
chr18:17974794-17974549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr18:24508062-24508343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
56-315
               

               
Cow position:
               
chr18:43796788-43797065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
85, 222
               

               
Conread position:
               
56-323
               

               
Cow position:
               
chr18:728192-727912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
71, 58
               

               
Conread position:
               
56-325
               

               
Cow position:
               
chr18:15517001-15517298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
56-333
               

               
Cow position:
               
chr18:23630444-23630730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
136, 239
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr18:10214020-10214339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
56-347
               

               
Cow position:
               
chr18:48242353-48242046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 32
               

               
Conread position:
               
56-354
               

               
Cow position:
               
chr18:42292893-42293201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 14
               

               
Conread position:
               
56-355
               

               
Cow position:
               
chr18:2151743-2151432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
28, 305
               

               
Conread position:
               
56-355
               

               
Cow position:
               
chr18:7963588-7963294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
137, 43
               

               
Conread position:
               
56-366
               

               
Cow position:
               
chr18:11578227-11577927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
56-376
               

               
Cow position:
               
chr18:4601875-4602181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
104, 13
               

               
Conread position:
               
56-392
               

               
Cow position:
               
chr18:5072246-5072601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 250
               

               
Conread position:
               
56-392
               

               
Cow position:
               
chr18:8300178-8299823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
46, 60
               

               
Conread position:
               
56-409
               

               
Cow position:
               
chr18:1399181-1399559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
79, 185
               

               
Conread position:
               
56-409
               

               
Cow position:
               
chr18:1954409-1954797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
60, 242
               

               
Conread position:
               
56-433
               

               
Cow position:
               
chr18:10977044-10977444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
77, 36
               

               
Conread position:
               
56-434
               

               
Cow position:
               
chr18:15340326-15340674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
244, 21
               

               
Conread position:
               
56-452
               

               
Cow position:
               
chr18:17649568-17649988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 224
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr18:11791092-11790681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
56-459
               

               
Cow position:
               
chr18:22411459-22411876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr18:9974159-9974587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 107
               

               
Conread position:
               
56-461
               

               
Cow position:
               
chr18:47525564-47525145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 35
               

               
Conread position:
               
56-462
               

               
Cow position:
               
chr18:11233592-11233169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
56, 76
               

               
Conread position:
               
56-462
               

               
Cow position:
               
chr18:54572114-54572558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
10, 134
               

               
Conread position:
               
56-462
               

               
Cow position:
               
chr18:55782263-55782684 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:2591989-2592436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:3115627-3115196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
71, 242
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:4668332-4668755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
10, 230
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:5766581-5766166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 233
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:7965403-7964968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
72, 121
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:11322756-11322326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
18, 42
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:29065221-29065636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
82, 198
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:29958010-29958410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:31586223-31586627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
137, 21
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:32410844-32411254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
97, 164
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr18:39662952-39662522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 124
               

               
Conread position:
               
56-466
               

               
Cow position:
               
chr18:48713713-48713289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 81
               

               
Conread position:
               
56-468
               

               
Cow position:
               
chr18:9558137-9557710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
86, 52
               

               
Conread position:
               
56-468
               

               
Cow position:
               
chr18:55589351-55589743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
128, 30
               

               
Conread position:
               
56-470
               

               
Cow position:
               
chr18:12117682-12118114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 112
               

               
Conread position:
               
56-471
               

               
Cow position:
               
chr18:20641330-20641755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 214
               

               
Conread position:
               
56-471
               

               
Cow position:
               
chr18:50082110-50082516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 55
               

               
Conread position:
               
56-511
               

               
Cow position:
               
chr18:10322967-10322480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 79
               

               
Conread position:
               
56-553
               

               
Cow position:
               
chr18:14048835-14048359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
163, 74
               

               
Conread position:
               
56-572
               

               
Cow position:
               
chr18:15173175-15172644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
56-581
               

               
Cow position:
               
chr18:6609676-6610228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 81
               

               
Conread position:
               
57-163
               

               
Cow position:
               
chr18:18956712-18956825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
114
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
57-189
               

               
Cow position:
               
chr18:19831745-19831612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
57-191
               

               
Cow position:
               
chr18:10117906-10117768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
57-191
               

               
Cow position:
               
chr18:18844181-18844044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
57-191
               

               
Cow position:
               
chr18:47824604-47824745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr18:19765356-19765180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
57-325
               

               
Cow position:
               
chr18:49017653-49017381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
89, 35
               

               
Conread position:
               
57-355
               

               
Cow position:
               
chr18:51594645-51594952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 76
               

               
Conread position:
               
57-356
               

               
Cow position:
               
chr18:50095239-50095545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
82, 216
               

               
Conread position:
               
57-375
               

               
Cow position:
               
chr18:30586066-30586390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
57-395
               

               
Cow position:
               
chr18:9066870-9066510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
82, 264
               

               
Conread position:
               
57-418
               

               
Cow position:
               
chr18:30341012-30341392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 190
               

               
Conread position:
               
57-445
               

               
Cow position:
               
chr18:19364084-19363687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 82
               

               
Conread position:
               
57-461
               

               
Cow position:
               
chr18:43283586-43284019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 59
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr18:31672348-31672769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 218
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr18:7650145-7649731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
136, 48
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr18:11691236-11691675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 259
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr18:19193202-19193613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 310
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr18:47512165-47511732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
20, 37
               

               
Conread position:
               
57-468
               

               
Cow position:
               
chr18:55499241-55498795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 259
               

               
Conread position:
               
57-471
               

               
Cow position:
               
chr18:5711506-5711938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 52
               

               
Conread position:
               
57-471
               

               
Cow position:
               
chr18:13360201-13359792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 31
               

               
Conread position:
               
57-547
               

               
Cow position:
               
chr18:6310250-6309718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
77, 313
               

               
Conread position:
               
58-184
               

               
Cow position:
               
chr18:47680679-47680547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
58-184
               

               
Cow position:
               
chr18:47865236-47865104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
78, 100
               

               
Conread position:
               
58-188
               

               
Cow position:
               
chr18:17925875-17925748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
58-188
               

               
Cow position:
               
chr18:18520632-18520770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
58-191
               

               
Cow position:
               
chr18:35581885-35582010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
58-195
               

               
Cow position:
               
chr18:45897565-45897704 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
80, 13
               

               
Conread position:
               
58-241
               

               
Cow position:
               
chr18:39860609-39860799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
58-263
               

               
Cow position:
               
chr18:911954-912165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
80, 26
               

               
Conread position:
               
58-346
               

               
Cow position:
               
chr18:4264227-4264533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 221
               

               
Conread position:
               
58-368
               

               
Cow position:
               
chr18:51515096-51515430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
73, 316
               

               
Conread position:
               
58-376
               

               
Cow position:
               
chr18:23821660-23821988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
80, 221
               

               
Conread position:
               
58-401
               

               
Cow position:
               
chr18:7109300-7108926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 108
               

               
Conread position:
               
58-459
               

               
Cow position:
               
chr18:26939141-26938724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
81, 37
               

               
Conread position:
               
58-460
               

               
Cow position:
               
chr18:45104263-45104707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 12
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr18:1144023-1144457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 30
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr18:9366091-9365649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 233
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr18:9806570-9806147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr18:20126957-20127366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 37
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr18:28657750-28658177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 28
               

               
Conread position:
               
58-467
               

               
Cow position:
               
chr18:10905016-10904581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
81, 106
               

               
Conread position:
               
58-471
               

               
Cow position:
               
chr18:46452714-46453149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 255
               

               
Conread position:
               
58-494
               

               
Cow position:
               
chr18:29080962-29080530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 35
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr18:6075240-6075367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
38, 79
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr18:33364378-33364240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
59-211
               

               
Cow position:
               
chr18:4485576-4485421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
79, 133
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr18:39460384-39460211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
79, 27
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr18:47801928-47802099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 162
               

               
Conread position:
               
59-230
               

               
Cow position:
               
chr18:16659260-16659449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
59-230
               

               
Cow position:
               
chr18:30786898-30786723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
59-263
               

               
Cow position:
               
chr18:32960247-32960054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
59-273
               

               
Cow position:
               
chr18:24719477-24719238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
59-308
               

               
Cow position:
               
chr18:1931291-1931559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
70, 223
               

               
Conread position:
               
59-362
               

               
Cow position:
               
chr18:20462539-20462851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
128, 79
               

               
Conread position:
               
59-375
               

               
Cow position:
               
chr18:52171034-52170705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 215
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr18:55747856-55747501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
69, 225
               

               
Conread position:
               
59-397
               

               
Cow position:
               
chr18:16313544-16313190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
79, 158
               

               
Conread position:
               
59-457
               

               
Cow position:
               
chr18:7956317-7955885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 36
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr18:18918795-18919216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 153
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr18:20270843-20271283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
68, 156
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr18:35797760-35797361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 31
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr18:38985859-38985424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 306
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr18:56145827-56145414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
39, 80
               

               
Conread position:
               
59-468
               

               
Cow position:
               
chr18:10517275-10516877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
80, 30
               

               
Conread position:
               
59-469
               

               
Cow position:
               
chr18:22789922-22790344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
72, 207
               

               
Conread position:
               
59-545
               

               
Cow position:
               
chr18:1405943-1405461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
134, 36
               

               
Conread position:
               
60-191
               

               
Cow position:
               
chr18:9596344-9596211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
60-191
               

               
Cow position:
               
chr18:37690318-37690178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
73, 127
               

               
Conread position:
               
60-191
               

               
Cow position:
               
chr18:41703001-41702862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
60-263
               

               
Cow position:
               
chr18:50359492-50359271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
79, 208
               

               
Conread position:
               
60-295
               

               
Cow position:
               
chr18:20317896-20318135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
124, 74
               

               
Conread position:
               
60-327
               

               
Cow position:
               
chr18:23163061-23162769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
57, 224
               

               
Conread position:
               
60-400
               

               
Cow position:
               
chr18:39811416-39811764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
25, 178
               

               
Conread position:
               
60-406
               

               
Cow position:
               
chr18:39623971-39623594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
76, 232
               

               
Conread position:
               
60-409
               

               
Cow position:
               
chr18:16545295-16545669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 228
               

               
Conread position:
               
60-460
               

               
Cow position:
               
chr18:16227728-16227301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
70, 229
               

               
Conread position:
               
60-460
               

               
Cow position:
               
chr18:32873763-32873323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
22, 115
               

               
Conread position:
               
60-461
               

               
Cow position:
               
chr18:13172363-13172783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
67, 122
               

               
Conread position:
               
60-462
               

               
Cow position:
               
chr18:50637325-50637725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
123, 67
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr18:19646324-19645912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
54, 93
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr18:56181291-56181718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 127
               

               
Conread position:
               
60-466
               

               
Cow position:
               
chr18:19849604-19850017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 79
               

               
Conread position:
               
60-466
               

               
Cow position:
               
chr18:36264614-36265054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 44
               

               
Conread position:
               
60-576
               

               
Cow position:
               
chr18:17756774-17757306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 227
               

               
Conread position:
               
61-409
               

               
Cow position:
               
chr18:3212046-3211665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 364
               

               
Conread position:
               
61-463
               

               
Cow position:
               
chr18:55505568-55505137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 10
               

               
Conread position:
               
63-189
               

               
Cow position:
               
chr18:44548583-44548716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
72, 9
               

               
Conread position:
               
63-190
               

               
Cow position:
               
chr18:10757893-10758026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
63-191
               

               
Cow position:
               
chr18:43014706-43014839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
63-463
               

               
Cow position:
               
chr18:2270353-2270767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 96
               

               
Conread position:
               
63-463
               

               
Cow position:
               
chr18:33159107-33158700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
75, 175
               

               
Conread position:
               
64-192
               

               
Cow position:
               
chr18:49126861-49126991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
75, 28
               

               
Conread position:
               
64-353
               

               
Cow position:
               
chr18:3066499-3066228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
11, 83
               

               
Conread position:
               
64-463
               

               
Cow position:
               
chr18:42747762-42747332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 226
               

               
Conread position:
               
65-191
               

               
Cow position:
               
chr18:29091890-29091766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
65-218
               

               
Cow position:
               
chr18:22045249-22045418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
65-222
               

               
Cow position:
               
chr18:42427778-42427611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
74, 46
               

               
Conread position:
               
65-316
               

               
Cow position:
               
chr18:24759498-24759768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
73, 14
               

               
Conread position:
               
65-461
               

               
Cow position:
               
chr18:10576265-10575847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
76, 88
               

               
Conread position:
               
65-463
               

               
Cow position:
               
chr18:50382412-50381994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 183
               

               
Conread position:
               
65-477
               

               
Cow position:
               
chr18:7945802-7945358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 37
               

               
Conread position:
               
67-190
               

               
Cow position:
               
chr18:11857056-11856930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
67-191
               

               
Cow position:
               
chr18:4485756-4485627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
67-191
               

               
Cow position:
               
chr18:15809651-15809775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
67-191
               

               
Cow position:
               
chr18:21143808-21143935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
67-191
               

               
Cow position:
               
chr18:22568908-22569038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
67, 41
               

               
Conread position:
               
67-191
               

               
Cow position:
               
chr18:28189574-28189693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
67-191
               

               
Cow position:
               
chr18:44205934-44206056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
67-211
               

               
Cow position:
               
chr18:22180621-22180768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
72, 125
               

               
Conread position:
               
67-222
               

               
Cow position:
               
chr18:11167260-11167113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
67-254
               

               
Cow position:
               
chr18:14172053-14172260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 116
               

               
Conread position:
               
67-263
               

               
Cow position:
               
chr18:47693214-47693004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
125, 62
               

               
Conread position:
               
67-271
               

               
Cow position:
               
chr18:35367045-35367262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 26
               

               
Conread position:
               
67-278
               

               
Cow position:
               
chr18:5647968-5647736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
65, 210
               

               
Conread position:
               
67-308
               

               
Cow position:
               
chr18:28930481-28930744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
67-320
               

               
Cow position:
               
chr18:38523813-38523557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
66, 49
               

               
Conread position:
               
67-355
               

               
Cow position:
               
chr18:5632425-5632114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
67-367
               

               
Cow position:
               
chr18:4556004-4556331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
65, 228
               

               
Conread position:
               
67-436
               

               
Cow position:
               
chr18:4495730-4496124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 36
               

               
Conread position:
               
67-439
               

               
Cow position:
               
chr18:17390830-17391213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 183
               

               
Conread position:
               
67-440
               

               
Cow position:
               
chr18:18592624-18592232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
125, 78
               

               
Conread position:
               
67-458
               

               
Cow position:
               
chr18:9089851-9089444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
72, 37
               

               
Conread position:
               
67-461
               

               
Cow position:
               
chr18:19143344-19143778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
61, 229
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr18:248673-249066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
125, 60
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr18:3422847-3422457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
170, 81
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr18:20173977-20174393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 44
               

               
Conread position:
               
67-464
               

               
Cow position:
               
chr18:29648940-29648518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
64, 100
               

               
Conread position:
               
67-465
               

               
Cow position:
               
chr18:47183153-47183549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
53, 20
               

               
Conread position:
               
67-465
               

               
Cow position:
               
chr18:49100225-49100633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 72
               

               
Conread position:
               
67-470
               

               
Cow position:
               
chr18:33300045-33299627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
126, 22
               

               
Conread position:
               
67-577
               

               
Cow position:
               
chr18:52695615-52695090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
65, 152
               

               
Conread position:
               
67-581
               

               
Cow position:
               
chr18:3166350-3166885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 116
               

               
Conread position:
               
67-581
               

               
Cow position:
               
chr18:5189531-5190089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 47
               

               
Conread position:
               
69-230
               

               
Cow position:
               
chr18:28322811-28322640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
69, 88
               

               
Conread position:
               
69-256
               

               
Cow position:
               
chr18:26586454-26586659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
66, 93
               

               
Conread position:
               
69-308
               

               
Cow position:
               
chr18:49015274-49015023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
91, 46
               

               
Conread position:
               
69-346
               

               
Cow position:
               
chr18:2146434-2146729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
120, 55
               

               
Conread position:
               
69-463
               

               
Cow position:
               
chr18:3132615-3133005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
60, 202
               

               
Conread position:
               
69-463
               

               
Cow position:
               
chr18:44262781-44262359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 300
               

               
Conread position:
               
70-446
               

               
Cow position:
               
chr18:26354884-26355279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 104
               

               
Conread position:
               
70-463
               

               
Cow position:
               
chr18:51757251-51756834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 124
               

               
Conread position:
               
71-270
               

               
Cow position:
               
chr18:19296031-19295821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
62, 199
               

               
Conread position:
               
71-354
               

               
Cow position:
               
chr18:42290178-42290473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 264
               

               
Conread position:
               
71-385
               

               
Cow position:
               
chr18:51643213-51643550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 97
               

               
Conread position:
               
71-439
               

               
Cow position:
               
chr18:247541-247923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 168
               

               
Conread position:
               
72-191
               

               
Cow position:
               
chr18:36098513-36098394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
72-192
               

               
Cow position:
               
chr18:35414070-35414186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
72-222
               

               
Cow position:
               
chr18:24022770-24022609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
72-260
               

               
Cow position:
               
chr18:40047349-40047557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
72-352
               

               
Cow position:
               
chr18:49038609-49038314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
67, 21
               

               
Conread position:
               
72-367
               

               
Cow position:
               
chr18:24266248-24266575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
72-367
               

               
Cow position:
               
chr18:25601170-25601480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
60, 97
               

               
Conread position:
               
72-377
               

               
Cow position:
               
chr18:12273809-12273480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
68, 34
               

               
Conread position:
               
73-211
               

               
Cow position:
               
chr18:38228554-38228409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
73-462
               

               
Cow position:
               
chr18:26999043-26998602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 203
               

               
Conread position:
               
74-311
               

               
Cow position:
               
chr18:47486199-47485945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
54, 89
               

               
Conread position:
               
75-185
               

               
Cow position:
               
chr18:26647712-26647593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
75-222
               

               
Cow position:
               
chr18:47872185-47872032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
75-269
               

               
Cow position:
               
chr18:47565967-47565761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
75-366
               

               
Cow position:
               
chr18:35874230-35873913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 94
               

               
Conread position:
               
75-463
               

               
Cow position:
               
chr18:42061209-42060816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
51, 123
               

               
Conread position:
               
75-463
               

               
Cow position:
               
chr18:55788841-55789255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
53, 240
               

               
Conread position:
               
75-467
               

               
Cow position:
               
chr18:11184091-11183674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
60, 223
               

               
Conread position:
               
75-487
               

               
Cow position:
               
chr18:37381939-37382386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
76-461
               

               
Cow position:
               
chr18:52881616-52881240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
70, 101
               

               
Conread position:
               
77-462
               

               
Cow position:
               
chr18:39001664-39002056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
41, 94
               

               
Conread position:
               
78-463
               

               
Cow position:
               
chr18:4648629-4648998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 101
               

               
Conread position:
               
79-379
               

               
Cow position:
               
chr18:50974137-50974470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
53, 235
               

               
Conread position:
               
80-463
               

               
Cow position:
               
chr18:29356486-29356893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
113, 75
               

               
Conread position:
               
80-463
               

               
Cow position:
               
chr18:34526958-34527365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 12
               

               
Conread position:
               
80-463
               

               
Cow position:
               
chr18:49655828-49655452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
81-462
               

               
Cow position:
               
chr18:7951265-7950851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
51, 22
               

               
Conread position:
               
81-463
               

               
Cow position:
               
chr18:51691317-51691731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 200
               

               
Conread position:
               
84-423
               

               
Cow position:
               
chr18:2863854-2864222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
84-462
               

               
Cow position:
               
chr18:36459068-36458672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 56
               

               
Conread position:
               
84-463
               

               
Cow position:
               
chr18:33793820-33793445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
102, 49
               

               
Conread position:
               
87-463
               

               
Cow position:
               
chr18:51712578-51712972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 145
               

               
Conread position:
               
91-462
               

               
Cow position:
               
chr18:51655911-51656315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
7, 186
               

               
Conread position:
               
96-313
               

               
Cow position:
               
chr18:46647032-46647258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
36, 127
               

               
Conread position:
               
99-395
               

               
Cow position:
               
chr18:858953-858616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
100-462
               

               
Cow position:
               
chr18:37023431-37023819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 38
               

               
Conread position:
               
101-577
               

               
Cow position:
               
chr18:11377485-11376965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 182
               

               
Conread position:
               
105-364
               

               
Cow position:
               
chr18:52693575-52693300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 253
               

               
Conread position:
               
109-461
               

               
Cow position:
               
chr18:51443332-51443692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 30
               

               
Conread position:
               
111-465
               

               
Cow position:
               
chr18:17005368-17004985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
114-457
               

               
Cow position:
               
chr18:29058397-29058753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 23
               

               
Conread position:
               
116-413
               

               
Cow position:
               
chr18:16049802-16050110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 10
               

               
Conread position:
               
116-458
               

               
Cow position:
               
chr18:21192309-21192667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
17, 60
               

               
Conread position:
               
120-397
               

               
Cow position:
               
chr18:27109193-27109492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
123-471
               

               
Cow position:
               
chr18:28923750-28924102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
28, 144
               

               
Conread position:
               
124-463
               

               
Cow position:
               
chr18:25282459-25282818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 164
               

               
Conread position:
               
125-463
               

               
Cow position:
               
chr18:38607318-38606973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
10, 239
               

               
Conread position:
               
126-361
               

               
Cow position:
               
chr18:52855147-52854893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 5
               

               
Conread position:
               
126-463
               

               
Cow position:
               
chr18:10656531-10656182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
65, 11
               

               
Conread position:
               
127-300
               

               
Cow position:
               
chr18:5701340-5701153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
65, 147
               

               
Conread position:
               
127-308
               

               
Cow position:
               
chr18:56044645-56044452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
65, 149
               

               
Conread position:
               
127-328
               

               
Cow position:
               
chr18:4872156-4871949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
12, 73
               

               
Conread position:
               
127-329
               

               
Cow position:
               
chr18:19883626-19883404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
127-355
               

               
Cow position:
               
chr18:16997345-16997101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
127-390
               

               
Cow position:
               
chr18:16686242-16686525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
29, 154
               

               
Conread position:
               
127-396
               

               
Cow position:
               
chr18:19896358-19896650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
127-409
               

               
Cow position:
               
chr18:39434917-39434620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
13, 49
               

               
Conread position:
               
127-409
               

               
Cow position:
               
chr18:51392550-51392849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
127-462
               

               
Cow position:
               
chr18:22214581-22214225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 216
               

               
Conread position:
               
127-462
               

               
Cow position:
               
chr18:56159554-56159203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 60
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr18:7359836-7359471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr18:21266599-21266245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
30, 202
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr18:21768706-21768364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 111
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr18:25647156-25647513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
42, 241
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr18:48453765-48453430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 11
               

               
Conread position:
               
127-465
               

               
Cow position:
               
chr18:33157906-33157556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 10
               

               
Conread position:
               
127-469
               

               
Cow position:
               
chr18:3158503-3158871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
66, 141
               

               
Conread position:
               
128-290
               

               
Cow position:
               
chr18:4624058-4624234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
11, 153
               

               
Conread position:
               
128-371
               

               
Cow position:
               
chr18:47835916-47835660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
128-463
               

               
Cow position:
               
chr18:23766318-23766679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
64, 170
               

               
Conread position:
               
128-463
               

               
Cow position:
               
chr18:52634975-52635345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
12, 310
               

               
Conread position:
               
128-468
               

               
Cow position:
               
chr18:19273006-19273373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
128-468
               

               
Cow position:
               
chr18:55000650-55001010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 213
               

               
Conread position:
               
128-471
               

               
Cow position:
               
chr18:3044535-3044160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 353
               

               
Conread position:
               
128-471
               

               
Cow position:
               
chr18:39875170-39875529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 9
               

               
Conread position:
               
128-499
               

               
Cow position:
               
chr18:38687170-38686793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
128-545
               

               
Cow position:
               
chr18:4673394-4672953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
64, 11
               

               
Conread position:
               
129-347
               

               
Cow position:
               
chr18:4203839-4204064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
10, 126
               

               
Conread position:
               
129-463
               

               
Cow position:
               
chr18:4797053-4796706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 8
               

               
Conread position:
               
129-467
               

               
Cow position:
               
chr18:7952730-7952379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
131-409
               

               
Cow position:
               
chr18:1585025-1585319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
64, 261
               

               
Conread position:
               
131-434
               

               
Cow position:
               
chr18:48828686-48829021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
131-463
               

               
Cow position:
               
chr18:4666129-4666475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
62, 31
               

               
Conread position:
               
132-334
               

               
Cow position:
               
chr18:47966840-47967054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
61, 144
               

               
Conread position:
               
132-374
               

               
Cow position:
               
chr18:51850478-51850729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
132-434
               

               
Cow position:
               
chr18:43020317-43020624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
60, 145
               

               
Conread position:
               
136-432
               

               
Cow position:
               
chr18:219399-219100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 58
               

               
Conread position:
               
137-376
               

               
Cow position:
               
chr18:21740733-21740981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
55, 222
               

               
Conread position:
               
137-391
               

               
Cow position:
               
chr18:36746177-36746444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
54, 153
               

               
Conread position:
               
137-457
               

               
Cow position:
               
chr18:38344889-38344543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
8, 228
               

               
Conread position:
               
137-461
               

               
Cow position:
               
chr18:31724808-31725149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 100
               

               
Conread position:
               
137-461
               

               
Cow position:
               
chr18:56184017-56183676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
54, 130
               

               
Conread position:
               
137-463
               

               
Cow position:
               
chr18:5457213-5457524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
100, 56
               

               
Conread position:
               
137-463
               

               
Cow position:
               
chr18:9008207-9007886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
45, 120
               

               
Conread position:
               
139-370
               

               
Cow position:
               
chr18:56190882-56191136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
53, 227
               

               
Conread position:
               
139-463
               

               
Cow position:
               
chr18:56171934-56172283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 175
               

               
Conread position:
               
139-471
               

               
Cow position:
               
chr18:19620021-19619677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 16
               

               
Conread position:
               
139-553
               

               
Cow position:
               
chr18:33407688-33407240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
139-581
               

               
Cow position:
               
chr18:30794506-30794045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 166
               

               
Conread position:
               
140-446
               

               
Cow position:
               
chr18:25984498-25984820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
50, 11
               

               
Conread position:
               
140-463
               

               
Cow position:
               
chr18:4539803-4540136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
52, 146
               

               
Conread position:
               
141-456
               

               
Cow position:
               
chr18:11685060-11684732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 148
               

               
Conread position:
               
143-417
               

               
Cow position:
               
chr18:18369286-18369578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 14
               

               
Conread position:
               
143-461
               

               
Cow position:
               
chr18:44801813-44802146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 146
               

               
Conread position:
               
143-461
               

               
Cow position:
               
chr18:45571088-45570760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
50, 35
               

               
Conread position:
               
145-577
               

               
Cow position:
               
chr18:21102702-21103139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
48, 126
               

               
Conread position:
               
151-433
               

               
Cow position:
               
chr18:56166049-56165750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
41, 133
               

               
Conread position:
               
151-468
               

               
Cow position:
               
chr18:13507672-13508000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
42, 211
               

               
Conread position:
               
152-463
               

               
Cow position:
               
chr18:4182121-4182454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 23
               

               
Conread position:
               
152-470
               

               
Cow position:
               
chr18:21176254-21175912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
31, 213
               

               
Conread position:
               
165-463
               

               
Cow position:
               
chr18:40759261-40758952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 115
               

               
Conread position:
               
168-352
               

               
Cow position:
               
chr18:22274790-22274983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
24, 107
               

               
Conread position:
               
168-369
               

               
Cow position:
               
chr18:37363834-37363637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 90
               

               
Conread position:
               
169-459
               

               
Cow position:
               
chr18:4078844-4078546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
24, 104
               

               
Conread position:
               
170-463
               

               
Cow position:
               
chr18:15025721-15025416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
23, 42
               

               
Conread position:
               
175-465
               

               
Cow position:
               
chr18:26937744-26937467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
11, 48
               

               
Conread position:
               
189-457
               

               
Cow position:
               
chr18:26286916-26286654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
218, 12
               

               
Conread position:
               
191-466
               

               
Cow position:
               
chr18:4625910-4625629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 128
               

               
Conread position:
               
192-463
               

               
Cow position:
               
chr18:21195330-21195601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
18, 133
               

               
Conread position:
               
196-409
               

               
Cow position:
               
chr18:54056556-54056355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
22, 66
               

               
Conread position:
               
200-463
               

               
Cow position:
               
chr18:32121065-32121325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
69, 23
               

               
Conread position:
               
205-437
               

               
Cow position:
               
chr18:33008060-33007819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
205-462
               

               
Cow position:
               
chr18:32773876-32773617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
205-463
               

               
Cow position:
               
chr18:4368779-4369043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
205-463
               

               
Cow position:
               
chr18:35636349-35636613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
27, 18
               

               
Conread position:
               
205-482
               

               
Cow position:
               
chr18:20481885-20482158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
30, 18
               

               
Conread position:
               
213-439
               

               
Cow position:
               
chr18:42966853-42966615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 12
               

               
Conread position:
               
213-471
               

               
Cow position:
               
chr18:26586668-26586935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
9, 50
               

               
Conread position:
               
214-463
               

               
Cow position:
               
chr18:39115144-39115407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
47, 19
               

               
Conread position:
               
218-462
               

               
Cow position:
               
chr18:22092759-22092519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
9, 18
               

               
Conread position:
               
221-483
               

               
Cow position:
               
chr18:47517236-47517492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
129, 41
               

               
Conread position:
               
222-367
               

               
Cow position:
               
chr18:10117482-10117342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
222-376
               

               
Cow position:
               
chr18:7970353-7970196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 89
               

               
Conread position:
               
222-401
               

               
Cow position:
               
chr18:23615901-23616080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 80
               

               
Conread position:
               
222-461
               

               
Cow position:
               
chr18:2608744-2608990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
12, 69
               

               
Conread position:
               
222-463
               

               
Cow position:
               
chr18:21528384-21528141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
222-463
               

               
Cow position:
               
chr18:48290459-48290701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 36
               

               
Conread position:
               
222-463
               

               
Cow position:
               
chr18:52632426-52632667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
13, 50
               

               
Conread position:
               
223-367
               

               
Cow position:
               
chr18:47124681-47124544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
223-461
               

               
Cow position:
               
chr18:1584251-1584473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
191, 47
               

               
Conread position:
               
223-462
               

               
Cow position:
               
chr18:35582117-35582364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
223-463
               

               
Cow position:
               
chr18:19831290-19831034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
9, 40
               

               
Conread position:
               
223-467
               

               
Cow position:
               
chr18:17669821-17670069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 43
               

               
Conread position:
               
224-356
               

               
Cow position:
               
chr18:36297036-36297176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
224-360
               

               
Cow position:
               
chr18:44027098-44026968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
224-375
               

               
Cow position:
               
chr18:2042523-2042665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
125, 32
               

               
Conread position:
               
224-392
               

               
Cow position:
               
chr18:35886862-35886688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
112, 97
               

               
Conread position:
               
224-396
               

               
Cow position:
               
chr18:27637189-27637016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
123, 37
               

               
Conread position:
               
224-396
               

               
Cow position:
               
chr18:33508692-33508869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
37, 122
               

               
Conread position:
               
224-423
               

               
Cow position:
               
chr18:14085441-14085238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
51, 113
               

               
Conread position:
               
224-431
               

               
Cow position:
               
chr18:1859241-1859451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
224-432
               

               
Cow position:
               
chr18:35777933-35777726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
132, 32
               

               
Conread position:
               
224-435
               

               
Cow position:
               
chr18:14871893-14872101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
153, 40
               

               
Conread position:
               
224-438
               

               
Cow position:
               
chr18:7947367-7947147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
129, 25
               

               
Conread position:
               
224-438
               

               
Cow position:
               
chr18:24945828-24946051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
39, 57
               

               
Conread position:
               
224-446
               

               
Cow position:
               
chr18:18562559-18562784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 43
               

               
Conread position:
               
224-461
               

               
Cow position:
               
chr18:34621383-34621629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
133, 71
               

               
Conread position:
               
224-462
               

               
Cow position:
               
chr18:10861452-10861680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 42
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:1582293-1582538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
38, 98
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:2480633-2480379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:3098344-3098577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:11166958-11166716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
153, 38
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:11680701-11680457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
152, 42
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:16045021-16045263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 128
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:20998646-20998881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
154, 27
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:35827435-35827678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
146, 33
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:47314303-47314557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:47868442-47868192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
69, 53
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:49161459-49161719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
64, 33
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:55552944-55552702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 33
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr18:56150666-56150919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
43, 121
               

               
Conread position:
               
224-471
               

               
Cow position:
               
chr18:267838-268081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
154, 46
               

               
Conread position:
               
224-472
               

               
Cow position:
               
chr18:14815365-14815606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 42
               

               
Conread position:
               
224-540
               

               
Cow position:
               
chr18:35537253-35537579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 101
               

               
Conread position:
               
224-576
               

               
Cow position:
               
chr18:36098189-36097812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 132
               

               
Conread position:
               
225-369
               

               
Cow position:
               
chr18:4952230-4952373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
43, 124
               

               
Conread position:
               
225-440
               

               
Cow position:
               
chr18:28822993-28823209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
124, 40
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr18:4381270-4381031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 119
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr18:16417727-16417960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
152, 31
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr18:19761677-19761435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
36, 99
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr18:52658388-52658158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 37
               

               
Conread position:
               
225-476
               

               
Cow position:
               
chr18:33606607-33606357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
225-577
               

               
Cow position:
               
chr18:4857917-4858298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
29, 123
               

               
Conread position:
               
225-577
               

               
Cow position:
               
chr18:21205340-21204983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
225-577
               

               
Cow position:
               
chr18:24022364-24021985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 158
               

               
Conread position:
               
225-577
               

               
Cow position:
               
chr18:33756850-33756487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
144, 32
               

               
Conread position:
               
226-409
               

               
Cow position:
               
chr18:18868730-18868540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
226-462
               

               
Cow position:
               
chr18:7059198-7058967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
6, 41
               

               
Conread position:
               
226-463
               

               
Cow position:
               
chr18:16847670-16847435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
203, 165
               

               
Conread position:
               
226-463
               

               
Cow position:
               
chr18:41271061-41270827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
152, 36
               

               
Conread position:
               
227-427
               

               
Cow position:
               
chr18:48036755-48036541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
15, 46
               

               
Conread position:
               
229-370
               

               
Cow position:
               
chr18:28190047-28190176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
229-375
               

               
Cow position:
               
chr18:45185728-45185575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
229-458
               

               
Cow position:
               
chr18:35076365-35076128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
28, 124
               

               
Conread position:
               
229-462
               

               
Cow position:
               
chr18:52382676-52382436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
37, 182
               

               
Conread position:
               
229-465
               

               
Cow position:
               
chr18:29388194-29387961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
178, 120
               

               
Conread position:
               
229-474
               

               
Cow position:
               
chr18:49665179-49665426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
67, 30
               

               
Conread position:
               
230-372
               

               
Cow position:
               
chr18:31125253-31125388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
230-463
               

               
Cow position:
               
chr18:30673670-30673904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
127, 27
               

               
Conread position:
               
230-463
               

               
Cow position:
               
chr18:45573079-45572846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 38
               

               
Conread position:
               
231-409
               

               
Cow position:
               
chr18:53962662-53962480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
39, 31
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr18:3027389-3027628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
148, 111
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr18:35012347-35012569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
156, 35
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr18:44548942-44549170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
31, 43
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr18:54658282-54658039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
96, 29
               

               
Conread position:
               
231-467
               

               
Cow position:
               
chr18:18339996-18340224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
231-472
               

               
Cow position:
               
chr18:43564196-43563956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
147, 26
               

               
Conread position:
               
233-467
               

               
Cow position:
               
chr18:4316280-4316040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 37
               

               
Conread position:
               
233-469
               

               
Cow position:
               
chr18:4515998-4515757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
143, 67
               

               
Conread position:
               
233-474
               

               
Cow position:
               
chr18:8170159-8169903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 183
               

               
Conread position:
               
233-580
               

               
Cow position:
               
chr18:26535539-26535909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
8, 197
               

               
Conread position:
               
235-456
               

               
Cow position:
               
chr18:30248171-30248384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
149, 36
               

               
Conread position:
               
235-463
               

               
Cow position:
               
chr18:5247545-5247782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
122, 42
               

               
Conread position:
               
237-462
               

               
Cow position:
               
chr18:52864343-52864578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
119, 110
               

               
Conread position:
               
238-463
               

               
Cow position:
               
chr18:11367792-11368026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
11, 38
               

               
Conread position:
               
240-355
               

               
Cow position:
               
chr18:19433022-19433141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
120
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
240-433
               

               
Cow position:
               
chr18:33896463-33896656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
28, 95
               

               
Conread position:
               
241-463
               

               
Cow position:
               
chr18:19159012-19159228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
104, 20
               

               
Conread position:
               
242-463
               

               
Cow position:
               
chr18:2569750-2569538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
133, 15
               

               
Conread position:
               
244-430
               

               
Cow position:
               
chr18:55715890-55716078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
97, 22
               

               
Conread position:
               
244-463
               

               
Cow position:
               
chr18:18957839-18958054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
134, 19
               

               
Conread position:
               
244-463
               

               
Cow position:
               
chr18:25206230-25206455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 52
               

               
Conread position:
               
244-463
               

               
Cow position:
               
chr18:46436802-46437015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
19, 80
               

               
Conread position:
               
246-421
               

               
Cow position:
               
chr18:18815712-18815894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
21, 157
               

               
Conread position:
               
250-419
               

               
Cow position:
               
chr18:29188968-29188790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
254-576
               

               
Cow position:
               
chr18:3193653-3193328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
255-461
               

               
Cow position:
               
chr18:5487195-5486990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
123, 7
               

               
Conread position:
               
256-409
               

               
Cow position:
               
chr18:179081-179234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
96, 23
               

               
Conread position:
               
256-460
               

               
Cow position:
               
chr18:19977034-19977240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
122, 21
               

               
Conread position:
               
256-464
               

               
Cow position:
               
chr18:1588663-1588867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
31, 96
               

               
Conread position:
               
257-460
               

               
Cow position:
               
chr18:23424866-23424669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
119, 73
               

               
Conread position:
               
257-463
               

               
Cow position:
               
chr18:16258800-16258605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
120, 31
               

               
Conread position:
               
257-471
               

               
Cow position:
               
chr18:1586854-1587060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 95
               

               
Conread position:
               
258-476
               

               
Cow position:
               
chr18:36478144-36477919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
30, 15
               

               
Conread position:
               
260-462
               

               
Cow position:
               
chr18:12113436-12113629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
153, 13
               

               
Conread position:
               
260-570
               

               
Cow position:
               
chr18:23807930-23808237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 10
               

               
Conread position:
               
261-444
               

               
Cow position:
               
chr18:12809801-12809615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
142, 87
               

               
Conread position:
               
261-463
               

               
Cow position:
               
chr18:23447138-23447345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
261-471
               

               
Cow position:
               
chr18:56361659-56361872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 68
               

               
Conread position:
               
266-449
               

               
Cow position:
               
chr18:56155438-56155253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
112, 81
               

               
Conread position:
               
266-463
               

               
Cow position:
               
chr18:36445377-36445169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
88, 102
               

               
Conread position:
               
269-439
               

               
Cow position:
               
chr18:24636435-24636275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
144, 40
               

               
Conread position:
               
269-463
               

               
Cow position:
               
chr18:49543409-49543215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
130, 34
               

               
Conread position:
               
270-462
               

               
Cow position:
               
chr18:47930931-47931122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
109, 79
               

               
Conread position:
               
270-463
               

               
Cow position:
               
chr18:11191363-11191170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
108, 26
               

               
Conread position:
               
271-463
               

               
Cow position:
               
chr18:20864922-20864720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
82, 9
               

               
Conread position:
               
272-463
               

               
Cow position:
               
chr18:13293443-13293246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 76
               

               
Conread position:
               
272-463
               

               
Cow position:
               
chr18:24342549-24342362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
141, 20
               

               
Conread position:
               
272-463
               

               
Cow position:
               
chr18:35058271-35058077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
135, 98
               

               
Conread position:
               
277-463
               

               
Cow position:
               
chr18:9818765-9818573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
281-461
               

               
Cow position:
               
chr18:5647171-5646985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
281-463
               

               
Cow position:
               
chr18:39709812-39709627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
283-459
               

               
Cow position:
               
chr18:4624510-4624689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
66, 20
               

               
Conread position:
               
283-463
               

               
Cow position:
               
chr18:2099428-2099616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
283-463
               

               
Cow position:
               
chr18:27388474-27388286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
283-463
               

               
Cow position:
               
chr18:32860565-32860384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 31
               

               
Conread position:
               
288-453
               

               
Cow position:
               
chr18:238427-238597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
290-437
               

               
Cow position:
               
chr18:35908538-35908386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
291-470
               

               
Cow position:
               
chr18:32244107-32244285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
38, 60
               

               
Conread position:
               
291-471
               

               
Cow position:
               
chr18:50700584-50700395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
41, 59
               

               
Conread position:
               
293-457
               

               
Cow position:
               
chr18:15880947-15881114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
82, 57
               

               
Conread position:
               
293-459
               

               
Cow position:
               
chr18:56192680-56192849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
85, 22
               

               
Conread position:
               
293-463
               

               
Cow position:
               
chr18:4529421-4529258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
294-463
               

               
Cow position:
               
chr18:48407701-48407526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 19
               

               
Conread position:
               
304-463
               

               
Cow position:
               
chr18:21721377-21721543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
308-462
               

               
Cow position:
               
chr18:45395903-45395739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
311-463
               

               
Cow position:
               
chr18:18976982-18976821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
312-463
               

               
Cow position:
               
chr18:1733301-1733455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 104
               

               
Conread position:
               
315-463
               

               
Cow position:
               
chr18:51178855-51179009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
317-463
               

               
Cow position:
               
chr18:56163474-56163324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
61, 32
               

               
Conread position:
               
320-460
               

               
Cow position:
               
chr18:13507449-13507588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
7, 30
               

               
Conread position:
               
328-470
               

               
Cow position:
               
chr18:52402640-52402788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
351-471
               

               
Cow position:
               
chr18:49660188-49660310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
52, 0
               
Show alignments to all cow chromosomes.