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Cow genome map

           
Conread name:
           
rpigcf0_017685.y1
        

               
Conread position:
               
28-444
               

               
Cow position:
               
chr23:23409947-23409536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 10
               

               
Conread position:
               
32-286
               

               
Cow position:
               
chr23:3279237-3279507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
23, 244
               

               
Conread position:
               
39-200
               

               
Cow position:
               
chr23:30311704-30311869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
43-438
               

               
Cow position:
               
chr23:35177521-35177113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
110, 20
               

               
Conread position:
               
44-460
               

               
Cow position:
               
chr23:1877678-1878097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
94, 200
               

               
Conread position:
               
45-191
               

               
Cow position:
               
chr23:3917651-3917801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
46-305
               

               
Cow position:
               
chr23:18823202-18822925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
16, 242
               

               
Conread position:
               
46-347
               

               
Cow position:
               
chr23:6035624-6035333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
147, 20
               

               
Conread position:
               
46-355
               

               
Cow position:
               
chr23:1656111-1655778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
46-463
               

               
Cow position:
               
chr23:3394278-3394719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
47-376
               

               
Cow position:
               
chr23:1744000-1743666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
87, 19
               

               
Conread position:
               
49-192
               

               
Cow position:
               
chr23:417596-417458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
19, 68
               

               
Conread position:
               
49-192
               

               
Cow position:
               
chr23:31753447-31753313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
49-195
               

               
Cow position:
               
chr23:22529240-22529387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
84, 18
               

               
Conread position:
               
49-211
               

               
Cow position:
               
chr23:7155488-7155655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 18
               

               
Conread position:
               
49-221
               

               
Cow position:
               
chr23:1510714-1510899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
49-222
               

               
Cow position:
               
chr23:2471219-2471029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
49-222
               

               
Cow position:
               
chr23:32621502-32621310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
49-233
               

               
Cow position:
               
chr23:18417289-18417108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
90, 20
               

               
Conread position:
               
49-255
               

               
Cow position:
               
chr23:16447480-16447705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
49-356
               

               
Cow position:
               
chr23:307672-307341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
89, 299
               

               
Conread position:
               
49-396
               

               
Cow position:
               
chr23:35239565-35239188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
87, 42
               

               
Conread position:
               
49-409
               

               
Cow position:
               
chr23:12148097-12147750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
327, 66
               

               
Conread position:
               
49-422
               

               
Cow position:
               
chr23:39813716-39813321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
79, 247
               

               
Conread position:
               
49-458
               

               
Cow position:
               
chr23:5723739-5723319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 23
               

               
Conread position:
               
49-461
               

               
Cow position:
               
chr23:2501645-2502075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
49-463
               

               
Cow position:
               
chr23:7845504-7845060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 45
               

               
Conread position:
               
50-319
               

               
Cow position:
               
chr23:35155568-35155292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
141, 75
               

               
Conread position:
               
50-471
               

               
Cow position:
               
chr23:15743302-15742862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 16
               

               
Conread position:
               
51-191
               

               
Cow position:
               
chr23:1614445-1614595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
51-236
               

               
Cow position:
               
chr23:30617264-30617466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
51-462
               

               
Cow position:
               
chr23:10084972-10085411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
87, 45
               

               
Conread position:
               
51-462
               

               
Cow position:
               
chr23:21866937-21866529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
14, 78
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr23:2316992-2316576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
88, 212
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr23:31601238-31601687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
76, 254
               

               
Conread position:
               
51-463
               

               
Cow position:
               
chr23:34416780-34416343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
27, 251
               

               
Conread position:
               
51-577
               

               
Cow position:
               
chr23:40502299-40502874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
22, 235
               

               
Conread position:
               
52-234
               

               
Cow position:
               
chr23:2395388-2395583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
77, 17
               

               
Conread position:
               
52-463
               

               
Cow position:
               
chr23:16582700-16583138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 14
               

               
Conread position:
               
52-508
               

               
Cow position:
               
chr23:21446324-21445844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 234
               

               
Conread position:
               
53-190
               

               
Cow position:
               
chr23:4844826-4844679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
13, 130
               

               
Conread position:
               
53-191
               

               
Cow position:
               
chr23:9131754-9131897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
86, 58
               

               
Conread position:
               
53-222
               

               
Cow position:
               
chr23:39248190-39248361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
86, 38
               

               
Conread position:
               
53-230
               

               
Cow position:
               
chr23:5395273-5395457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
53-380
               

               
Cow position:
               
chr23:18286393-18286057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
139, 84
               

               
Conread position:
               
53-394
               

               
Cow position:
               
chr23:26051230-26050881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
53-438
               

               
Cow position:
               
chr23:1636478-1636078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 204
               

               
Conread position:
               
53-463
               

               
Cow position:
               
chr23:1884963-1885405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 235
               

               
Conread position:
               
53-463
               

               
Cow position:
               
chr23:33601323-33601753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 116
               

               
Conread position:
               
54-191
               

               
Cow position:
               
chr23:40095393-40095248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
54-222
               

               
Cow position:
               
chr23:21423975-21423794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
54-223
               

               
Cow position:
               
chr23:24718595-24718777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
83, 13
               

               
Conread position:
               
54-436
               

               
Cow position:
               
chr23:29786134-29786555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
73, 253
               

               
Conread position:
               
55-170
               

               
Cow position:
               
chr23:20542902-20542787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
83, 97
               

               
Conread position:
               
55-191
               

               
Cow position:
               
chr23:14895480-14895610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
55-191
               

               
Cow position:
               
chr23:23104283-23104424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
76, 13
               

               
Conread position:
               
55-192
               

               
Cow position:
               
chr23:21638581-21638439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
55-222
               

               
Cow position:
               
chr23:38992888-38993063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
86, 37
               

               
Conread position:
               
55-223
               

               
Cow position:
               
chr23:4291565-4291380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
55-376
               

               
Cow position:
               
chr23:24983983-24984307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
116, 80
               

               
Conread position:
               
55-397
               

               
Cow position:
               
chr23:19774956-19774613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
130, 53
               

               
Conread position:
               
55-430
               

               
Cow position:
               
chr23:1759457-1759078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
13, 149
               

               
Conread position:
               
55-432
               

               
Cow position:
               
chr23:3967346-3967748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
55-451
               

               
Cow position:
               
chr23:20996645-20996255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
136, 73
               

               
Conread position:
               
55-462
               

               
Cow position:
               
chr23:40778471-40778034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
76, 37
               

               
Conread position:
               
55-463
               

               
Cow position:
               
chr23:13360015-13359590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
71, 171
               

               
Conread position:
               
55-468
               

               
Cow position:
               
chr23:5617782-5617342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 13
               

               
Conread position:
               
55-470
               

               
Cow position:
               
chr23:18322241-18322656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
55-471
               

               
Cow position:
               
chr23:5603089-5603508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 77
               

               
Conread position:
               
56-185
               

               
Cow position:
               
chr23:12081002-12080872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
56-189
               

               
Cow position:
               
chr23:22704785-22704650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
56-190
               

               
Cow position:
               
chr23:1277050-1276918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
83, 36
               

               
Conread position:
               
56-190
               

               
Cow position:
               
chr23:25968623-25968485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:7709989-7709854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 97
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:11053691-11053830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
72, 48
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:20725484-20725624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:22654491-22654623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:25933355-25933221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:26975260-26975401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:30256054-30255925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
56-191
               

               
Cow position:
               
chr23:41478083-41477942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
56-209
               

               
Cow position:
               
chr23:17392814-17392659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
133, 79
               

               
Conread position:
               
56-211
               

               
Cow position:
               
chr23:17597629-17597464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
82, 36
               

               
Conread position:
               
56-222
               

               
Cow position:
               
chr23:1480849-1480666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
56-223
               

               
Cow position:
               
chr23:32479810-32479992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
56-250
               

               
Cow position:
               
chr23:2110985-2110781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
72, 114
               

               
Conread position:
               
56-260
               

               
Cow position:
               
chr23:7696748-7696535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
85, 37
               

               
Conread position:
               
56-263
               

               
Cow position:
               
chr23:36353947-36353742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
131, 69
               

               
Conread position:
               
56-302
               

               
Cow position:
               
chr23:19269253-19268985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 166
               

               
Conread position:
               
56-308
               

               
Cow position:
               
chr23:17484649-17484909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
16, 84
               

               
Conread position:
               
56-317
               

               
Cow position:
               
chr23:20539586-20539304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
56-340
               

               
Cow position:
               
chr23:3522951-3522651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
10, 231
               

               
Conread position:
               
56-355
               

               
Cow position:
               
chr23:3244708-3245031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 128
               

               
Conread position:
               
56-376
               

               
Cow position:
               
chr23:22414102-22414430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
60, 91
               

               
Conread position:
               
56-386
               

               
Cow position:
               
chr23:5436433-5436792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
76, 117
               

               
Conread position:
               
56-409
               

               
Cow position:
               
chr23:1585192-1585558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
56-417
               

               
Cow position:
               
chr23:40651284-40651645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
103, 68
               

               
Conread position:
               
56-431
               

               
Cow position:
               
chr23:38974041-38973649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 11
               

               
Conread position:
               
56-453
               

               
Cow position:
               
chr23:4505019-4504608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
79, 39
               

               
Conread position:
               
56-458
               

               
Cow position:
               
chr23:4995889-4996312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 273
               

               
Conread position:
               
56-459
               

               
Cow position:
               
chr23:40790172-40789758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 229
               

               
Conread position:
               
56-462
               

               
Cow position:
               
chr23:534433-534001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 246
               

               
Conread position:
               
56-462
               

               
Cow position:
               
chr23:10853254-10852824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 46
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:187386-186942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 232
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:2179456-2179876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
71, 28
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:3247796-3247359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:7485238-7484850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
179, 82
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:13555226-13555657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
37, 244
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:16880963-16881386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 81
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:26794706-26795133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
82, 229
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:26841629-26841219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
78, 274
               

               
Conread position:
               
56-463
               

               
Cow position:
               
chr23:39753308-39752885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 19
               

               
Conread position:
               
56-468
               

               
Cow position:
               
chr23:37223885-37224300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
105, 70
               

               
Conread position:
               
56-471
               

               
Cow position:
               
chr23:5389887-5389465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
134, 70
               

               
Conread position:
               
56-489
               

               
Cow position:
               
chr23:40891551-40891107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
69, 82
               

               
Conread position:
               
56-577
               

               
Cow position:
               
chr23:21660143-21659589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 50
               

               
Conread position:
               
57-189
               

               
Cow position:
               
chr23:2511351-2511211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
57-191
               

               
Cow position:
               
chr23:18710266-18710395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
57-191
               

               
Cow position:
               
chr23:26698276-26698408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
121, 74
               

               
Conread position:
               
57-192
               

               
Cow position:
               
chr23:4521675-4521822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 121
               

               
Conread position:
               
57-200
               

               
Cow position:
               
chr23:22668306-22668451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
57-218
               

               
Cow position:
               
chr23:5642155-5642330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
57-218
               

               
Cow position:
               
chr23:35930154-35929981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
78, 38
               

               
Conread position:
               
57-222
               

               
Cow position:
               
chr23:17012536-17012712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
57-227
               

               
Cow position:
               
chr23:40122757-40122584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
60, 36
               

               
Conread position:
               
57-241
               

               
Cow position:
               
chr23:11369426-11369235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
81, 35
               

               
Conread position:
               
57-266
               

               
Cow position:
               
chr23:3568358-3568558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
104, 78
               

               
Conread position:
               
57-305
               

               
Cow position:
               
chr23:1981467-1981721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 35
               

               
Conread position:
               
57-320
               

               
Cow position:
               
chr23:16780350-16780631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
78, 49
               

               
Conread position:
               
57-401
               

               
Cow position:
               
chr23:16744749-16744382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
80, 160
               

               
Conread position:
               
57-430
               

               
Cow position:
               
chr23:4726998-4726591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
81, 120
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr23:2281982-2282402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
82, 40
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr23:24704489-24704051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
88, 36
               

               
Conread position:
               
57-462
               

               
Cow position:
               
chr23:26949397-26948962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 222
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr23:1429627-1430024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
89, 147
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr23:10416222-10416652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 110
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr23:20171768-20171346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 71
               

               
Conread position:
               
57-463
               

               
Cow position:
               
chr23:37066062-37065608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
57-468
               

               
Cow position:
               
chr23:20388460-20388873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
57-471
               

               
Cow position:
               
chr23:14838555-14838971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 40
               

               
Conread position:
               
57-577
               

               
Cow position:
               
chr23:22530231-22530778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 147
               

               
Conread position:
               
58-190
               

               
Cow position:
               
chr23:15056371-15056507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
58-192
               

               
Cow position:
               
chr23:4042654-4042518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
81, 34
               

               
Conread position:
               
58-222
               

               
Cow position:
               
chr23:1954479-1954306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
77, 19
               

               
Conread position:
               
58-231
               

               
Cow position:
               
chr23:1490559-1490378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
28, 162
               

               
Conread position:
               
58-320
               

               
Cow position:
               
chr23:19872495-19872756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
134, 34
               

               
Conread position:
               
58-325
               

               
Cow position:
               
chr23:385103-385399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
58-418
               

               
Cow position:
               
chr23:34611291-34611645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 169
               

               
Conread position:
               
58-463
               

               
Cow position:
               
chr23:6244398-6244816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 19
               

               
Conread position:
               
59-189
               

               
Cow position:
               
chr23:27307952-27307811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr23:13137735-13137872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr23:21664506-21664368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
10, 37
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr23:22205396-22205527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
59-191
               

               
Cow position:
               
chr23:22651603-22651470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 80
               

               
Conread position:
               
59-222
               

               
Cow position:
               
chr23:18489856-18489683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
59-241
               

               
Cow position:
               
chr23:5603543-5603738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
59-255
               

               
Cow position:
               
chr23:35656613-35656394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 212
               

               
Conread position:
               
59-284
               

               
Cow position:
               
chr23:36200603-36200367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
74, 111
               

               
Conread position:
               
59-340
               

               
Cow position:
               
chr23:1222037-1222341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
37, 45
               

               
Conread position:
               
59-387
               

               
Cow position:
               
chr23:38234-37886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
72, 206
               

               
Conread position:
               
59-389
               

               
Cow position:
               
chr23:33152991-33153342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
59-401
               

               
Cow position:
               
chr23:12091156-12091524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
76, 29
               

               
Conread position:
               
59-437
               

               
Cow position:
               
chr23:30585445-30585865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 119
               

               
Conread position:
               
59-446
               

               
Cow position:
               
chr23:2457635-2457250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
176, 57
               

               
Conread position:
               
59-461
               

               
Cow position:
               
chr23:18802063-18802500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
78, 225
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr23:2055864-2055473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 74
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr23:4968327-4968749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 36
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr23:5869986-5870412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
69, 214
               

               
Conread position:
               
59-463
               

               
Cow position:
               
chr23:29626630-29626185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
68, 216
               

               
Conread position:
               
59-554
               

               
Cow position:
               
chr23:34356845-34356309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 229
               

               
Conread position:
               
60-367
               

               
Cow position:
               
chr23:3890369-3890694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
68, 222
               

               
Conread position:
               
60-369
               

               
Cow position:
               
chr23:11081461-11081128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
68, 297
               

               
Conread position:
               
60-411
               

               
Cow position:
               
chr23:1583720-1583356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
84, 64
               

               
Conread position:
               
60-424
               

               
Cow position:
               
chr23:33570334-33569945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
79, 232
               

               
Conread position:
               
60-456
               

               
Cow position:
               
chr23:16689862-16690284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
67, 237
               

               
Conread position:
               
60-462
               

               
Cow position:
               
chr23:4498929-4499364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
47, 113
               

               
Conread position:
               
60-462
               

               
Cow position:
               
chr23:28206802-28206383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
35, 124
               

               
Conread position:
               
60-462
               

               
Cow position:
               
chr23:39778600-39778185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
78, 30
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr23:1337104-1337533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 113
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr23:24509887-24509473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 129
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr23:29345574-29345989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 209
               

               
Conread position:
               
60-463
               

               
Cow position:
               
chr23:41348425-41348878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
60-471
               

               
Cow position:
               
chr23:29243135-29242709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 112
               

               
Conread position:
               
60-472
               

               
Cow position:
               
chr23:15286948-15287371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 78
               

               
Conread position:
               
60-577
               

               
Cow position:
               
chr23:25675494-25676041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
60-577
               

               
Cow position:
               
chr23:35942395-35941855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 37
               

               
Conread position:
               
61-237
               

               
Cow position:
               
chr23:22674230-22674410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
29, 76
               

               
Conread position:
               
61-463
               

               
Cow position:
               
chr23:22297828-22298246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 267
               

               
Conread position:
               
63-191
               

               
Cow position:
               
chr23:5743284-5743165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
63-280
               

               
Cow position:
               
chr23:26283920-26283682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 221
               

               
Conread position:
               
63-316
               

               
Cow position:
               
chr23:11750953-11751208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
124, 64
               

               
Conread position:
               
63-334
               

               
Cow position:
               
chr23:38732431-38732138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
129, 80
               

               
Conread position:
               
63-355
               

               
Cow position:
               
chr23:283202-283505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
129, 30
               

               
Conread position:
               
63-463
               

               
Cow position:
               
chr23:22396256-22396675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 72
               

               
Conread position:
               
63-471
               

               
Cow position:
               
chr23:22804922-22804486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
64-190
               

               
Cow position:
               
chr23:10844758-10844620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
64-222
               

               
Cow position:
               
chr23:12405622-12405794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
75, 50
               

               
Conread position:
               
64-347
               

               
Cow position:
               
chr23:33599108-33599404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
69, 98
               

               
Conread position:
               
65-166
               

               
Cow position:
               
chr23:23033342-23033444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
103
               

               
Alignm identity:
               
84
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
65-230
               

               
Cow position:
               
chr23:22826255-22826422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
127, 66
               

               
Conread position:
               
67-186
               

               
Cow position:
               
chr23:40137753-40137631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
67-191
               

               
Cow position:
               
chr23:1194299-1194428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
67-230
               

               
Cow position:
               
chr23:10888464-10888293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 86
               

               
Conread position:
               
67-281
               

               
Cow position:
               
chr23:30244721-30244496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
67-308
               

               
Cow position:
               
chr23:16961482-16961226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
125, 65
               

               
Conread position:
               
67-315
               

               
Cow position:
               
chr23:5881325-5881595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
67-332
               

               
Cow position:
               
chr23:11212700-11212412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
66, 235
               

               
Conread position:
               
67-340
               

               
Cow position:
               
chr23:10497892-10497607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
58, 151
               

               
Conread position:
               
67-340
               

               
Cow position:
               
chr23:24685436-24685150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 94
               

               
Conread position:
               
67-365
               

               
Cow position:
               
chr23:5795672-5795352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
68, 230
               

               
Conread position:
               
67-366
               

               
Cow position:
               
chr23:9226470-9226147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
71, 53
               

               
Conread position:
               
67-376
               

               
Cow position:
               
chr23:12363423-12363755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
71, 229
               

               
Conread position:
               
67-401
               

               
Cow position:
               
chr23:40081695-40081366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
122, 71
               

               
Conread position:
               
67-409
               

               
Cow position:
               
chr23:8923795-8923434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
71, 100
               

               
Conread position:
               
67-432
               

               
Cow position:
               
chr23:5451518-5451123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
67-440
               

               
Cow position:
               
chr23:3190931-3191330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
53, 13
               

               
Conread position:
               
67-446
               

               
Cow position:
               
chr23:18901870-18902263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
125, 68
               

               
Conread position:
               
67-456
               

               
Cow position:
               
chr23:4646703-4646292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 276
               

               
Conread position:
               
67-457
               

               
Cow position:
               
chr23:20557646-20558082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
64, 240
               

               
Conread position:
               
67-460
               

               
Cow position:
               
chr23:1883589-1883167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 264
               

               
Conread position:
               
67-461
               

               
Cow position:
               
chr23:41472821-41472382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 120
               

               
Conread position:
               
67-462
               

               
Cow position:
               
chr23:2417620-2417227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr23:8063724-8063325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
125, 61
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr23:13520640-13520228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
67, 26
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr23:19636085-19636493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
31, 82
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr23:25864498-25864913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 103
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr23:26986076-26986503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
65, 26
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr23:34314756-34315199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
20, 227
               

               
Conread position:
               
67-463
               

               
Cow position:
               
chr23:40781509-40781097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 65
               

               
Conread position:
               
67-581
               

               
Cow position:
               
chr23:39049244-39049788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
6.99949e-42
               

               
Alignm gaps (pig, cow):
               
62, 233
               

               
Conread position:
               
69-392
               

               
Cow position:
               
chr23:35938522-35938191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
122, 10
               

               
Conread position:
               
69-581
               

               
Cow position:
               
chr23:6224162-6223650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
70-222
               

               
Cow position:
               
chr23:5927429-5927589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
70-222
               

               
Cow position:
               
chr23:16664210-16664375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
68, 98
               

               
Conread position:
               
70-375
               

               
Cow position:
               
chr23:5436808-5437134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
68, 232
               

               
Conread position:
               
70-395
               

               
Cow position:
               
chr23:18415864-18416207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
45, 22
               

               
Conread position:
               
70-463
               

               
Cow position:
               
chr23:11129429-11129005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 44
               

               
Conread position:
               
70-463
               

               
Cow position:
               
chr23:33711955-33711539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 99
               

               
Conread position:
               
71-463
               

               
Cow position:
               
chr23:31970358-31970750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
121, 64
               

               
Conread position:
               
72-301
               

               
Cow position:
               
chr23:13202180-13202424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
120, 36
               

               
Conread position:
               
72-370
               

               
Cow position:
               
chr23:2286015-2285717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
66, 43
               

               
Conread position:
               
72-372
               

               
Cow position:
               
chr23:5732728-5732417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
120, 20
               

               
Conread position:
               
72-454
               

               
Cow position:
               
chr23:1536511-1536107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 154
               

               
Conread position:
               
72-461
               

               
Cow position:
               
chr23:20194739-20195145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 41
               

               
Conread position:
               
72-462
               

               
Cow position:
               
chr23:26319565-26319189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
103, 20
               

               
Conread position:
               
72-463
               

               
Cow position:
               
chr23:4810930-4810521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
43, 49
               

               
Conread position:
               
73-286
               

               
Cow position:
               
chr23:2160452-2160683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
66, 47
               

               
Conread position:
               
73-457
               

               
Cow position:
               
chr23:36309576-36309202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
305, 72
               

               
Conread position:
               
74-463
               

               
Cow position:
               
chr23:19001898-19002298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
74-470
               

               
Cow position:
               
chr23:26632989-26632563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 28
               

               
Conread position:
               
75-191
               

               
Cow position:
               
chr23:29803339-29803455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
75-328
               

               
Cow position:
               
chr23:2359064-2358802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 29
               

               
Conread position:
               
75-439
               

               
Cow position:
               
chr23:1776465-1776836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
36, 47
               

               
Conread position:
               
75-463
               

               
Cow position:
               
chr23:15872526-15872930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
118, 20
               

               
Conread position:
               
75-463
               

               
Cow position:
               
chr23:29470953-29471348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
59, 20
               

               
Conread position:
               
76-394
               

               
Cow position:
               
chr23:7361282-7360959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
117, 30
               

               
Conread position:
               
77-325
               

               
Cow position:
               
chr23:14651525-14651791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
51, 15
               

               
Conread position:
               
77-463
               

               
Cow position:
               
chr23:21452546-21452962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 203
               

               
Conread position:
               
77-577
               

               
Cow position:
               
chr23:9599674-9599158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 37
               

               
Conread position:
               
78-433
               

               
Cow position:
               
chr23:1188735-1189101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
53, 17
               

               
Conread position:
               
84-436
               

               
Cow position:
               
chr23:16631451-16631062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 206
               

               
Conread position:
               
86-463
               

               
Cow position:
               
chr23:6768086-6767661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
52, 303
               

               
Conread position:
               
90-463
               

               
Cow position:
               
chr23:15709927-15710307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
79, 71
               

               
Conread position:
               
91-359
               

               
Cow position:
               
chr23:1701346-1701051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
44, 195
               

               
Conread position:
               
93-463
               

               
Cow position:
               
chr23:20056712-20057096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 108
               

               
Conread position:
               
99-355
               

               
Cow position:
               
chr23:306689-306409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
39, 249
               

               
Conread position:
               
99-376
               

               
Cow position:
               
chr23:40290401-40290676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 53
               

               
Conread position:
               
100-463
               

               
Cow position:
               
chr23:39775888-39775502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 80
               

               
Conread position:
               
106-463
               

               
Cow position:
               
chr23:6367754-6367376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
33, 77
               

               
Conread position:
               
108-409
               

               
Cow position:
               
chr23:40844797-40844480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
32, 56
               

               
Conread position:
               
110-463
               

               
Cow position:
               
chr23:5540298-5539950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
29, 82
               

               
Conread position:
               
111-472
               

               
Cow position:
               
chr23:29034458-29034076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 9
               

               
Conread position:
               
113-446
               

               
Cow position:
               
chr23:21765066-21764705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
21, 257
               

               
Conread position:
               
114-453
               

               
Cow position:
               
chr23:40648593-40648947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
80, 21
               

               
Conread position:
               
116-463
               

               
Cow position:
               
chr23:9268719-9268360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
24, 109
               

               
Conread position:
               
120-461
               

               
Cow position:
               
chr23:18402155-18402513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 154
               

               
Conread position:
               
121-463
               

               
Cow position:
               
chr23:14164260-14164629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
20, 163
               

               
Conread position:
               
121-466
               

               
Cow position:
               
chr23:6994849-6995206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 7
               

               
Conread position:
               
122-463
               

               
Cow position:
               
chr23:13599471-13599112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 7
               

               
Conread position:
               
124-453
               

               
Cow position:
               
chr23:1490165-1489837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
66, 54
               

               
Conread position:
               
126-352
               

               
Cow position:
               
chr23:39780884-39780644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
13, 158
               

               
Conread position:
               
126-463
               

               
Cow position:
               
chr23:38208854-38208481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
72, 168
               

               
Conread position:
               
127-319
               

               
Cow position:
               
chr23:38845727-38845525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
127-331
               

               
Cow position:
               
chr23:20002382-20002162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
127-375
               

               
Cow position:
               
chr23:30951084-30950824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 89
               

               
Conread position:
               
127-376
               

               
Cow position:
               
chr23:4327573-4327832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
64, 111
               

               
Conread position:
               
127-392
               

               
Cow position:
               
chr23:13946166-13945873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
12, 154
               

               
Conread position:
               
127-401
               

               
Cow position:
               
chr23:7574496-7574797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
127-408
               

               
Cow position:
               
chr23:38502979-38503286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 51
               

               
Conread position:
               
127-409
               

               
Cow position:
               
chr23:2487866-2488154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
64, 10
               

               
Conread position:
               
127-409
               

               
Cow position:
               
chr23:39083579-39083286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
12, 25
               

               
Conread position:
               
127-421
               

               
Cow position:
               
chr23:4104522-4104219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
65, 10
               

               
Conread position:
               
127-448
               

               
Cow position:
               
chr23:18296934-18296593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 145
               

               
Conread position:
               
127-457
               

               
Cow position:
               
chr23:10553880-10554235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 173
               

               
Conread position:
               
127-461
               

               
Cow position:
               
chr23:1397910-1398265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 147
               

               
Conread position:
               
127-461
               

               
Cow position:
               
chr23:9734537-9734187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 153
               

               
Conread position:
               
127-461
               

               
Cow position:
               
chr23:20434937-20435278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
66, 7
               

               
Conread position:
               
127-461
               

               
Cow position:
               
chr23:38455051-38455412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 10
               

               
Conread position:
               
127-462
               

               
Cow position:
               
chr23:1923709-1924064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 21
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr23:344060-344407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 110
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr23:4528751-4529121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 36
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr23:7596225-7596560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 80
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr23:13511854-13511504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 107
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr23:30662511-30662857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 103
               

               
Conread position:
               
127-463
               

               
Cow position:
               
chr23:33717414-33717773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 29
               

               
Conread position:
               
127-471
               

               
Cow position:
               
chr23:5707122-5706763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 163
               

               
Conread position:
               
127-471
               

               
Cow position:
               
chr23:18697895-18698262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
8, 156
               

               
Conread position:
               
127-473
               

               
Cow position:
               
chr23:11045616-11045246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 241
               

               
Conread position:
               
128-347
               

               
Cow position:
               
chr23:39276024-39275781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
11, 20
               

               
Conread position:
               
128-463
               

               
Cow position:
               
chr23:20744469-20744818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 32
               

               
Conread position:
               
128-463
               

               
Cow position:
               
chr23:24867435-24867073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
34, 11
               

               
Conread position:
               
128-463
               

               
Cow position:
               
chr23:25358838-25358502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 10
               

               
Conread position:
               
128-465
               

               
Cow position:
               
chr23:1254813-1254446 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 9
               

               
Conread position:
               
129-444
               

               
Cow position:
               
chr23:1742480-1742147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 147
               

               
Conread position:
               
132-332
               

               
Cow position:
               
chr23:29069319-29069536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
61, 7
               

               
Conread position:
               
132-399
               

               
Cow position:
               
chr23:4966942-4966659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
8, 158
               

               
Conread position:
               
132-461
               

               
Cow position:
               
chr23:21336361-21336716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
132-463
               

               
Cow position:
               
chr23:1906164-1905799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 18
               

               
Conread position:
               
133-462
               

               
Cow position:
               
chr23:5162552-5162204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 265
               

               
Conread position:
               
134-463
               

               
Cow position:
               
chr23:6592587-6592923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 133
               

               
Conread position:
               
135-405
               

               
Cow position:
               
chr23:1767950-1767661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
135-487
               

               
Cow position:
               
chr23:27544947-27544582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 148
               

               
Conread position:
               
136-464
               

               
Cow position:
               
chr23:1690892-1690558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
116, 58
               

               
Conread position:
               
136-581
               

               
Cow position:
               
chr23:27563587-27564070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 188
               

               
Conread position:
               
137-355
               

               
Cow position:
               
chr23:1876829-1876593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
137-396
               

               
Cow position:
               
chr23:33622032-33622312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
56, 163
               

               
Conread position:
               
137-463
               

               
Cow position:
               
chr23:29458981-29459318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
55, 90
               

               
Conread position:
               
137-581
               

               
Cow position:
               
chr23:16699924-16700395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 140
               

               
Conread position:
               
139-300
               

               
Cow position:
               
chr23:35503888-35503723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
54, 139
               

               
Conread position:
               
139-366
               

               
Cow position:
               
chr23:36172639-36172395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
55, 123
               

               
Conread position:
               
139-463
               

               
Cow position:
               
chr23:1720867-1721216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
50, 235
               

               
Conread position:
               
142-279
               

               
Cow position:
               
chr23:30655701-30655852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
147-342
               

               
Cow position:
               
chr23:4795277-4795069 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
46, 137
               

               
Conread position:
               
147-411
               

               
Cow position:
               
chr23:12334317-12334035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
46, 221
               

               
Conread position:
               
148-463
               

               
Cow position:
               
chr23:10014633-10014316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 12
               

               
Conread position:
               
150-581
               

               
Cow position:
               
chr23:33940052-33940509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
9, 158
               

               
Conread position:
               
151-465
               

               
Cow position:
               
chr23:34348419-34348103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
44, 102
               

               
Conread position:
               
153-463
               

               
Cow position:
               
chr23:3262396-3262728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
39, 126
               

               
Conread position:
               
157-466
               

               
Cow position:
               
chr23:4562983-4562651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
35, 122
               

               
Conread position:
               
158-470
               

               
Cow position:
               
chr23:25378743-25378421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 114
               

               
Conread position:
               
159-463
               

               
Cow position:
               
chr23:17796231-17796546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
67, 33
               

               
Conread position:
               
162-432
               

               
Cow position:
               
chr23:30999657-30999377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
25, 105
               

               
Conread position:
               
164-457
               

               
Cow position:
               
chr23:1647707-1647405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
28, 97
               

               
Conread position:
               
165-428
               

               
Cow position:
               
chr23:19370985-19371265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
28, 194
               

               
Conread position:
               
165-463
               

               
Cow position:
               
chr23:20781898-20781595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
26, 61
               

               
Conread position:
               
168-361
               

               
Cow position:
               
chr23:4445645-4445842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
28, 154
               

               
Conread position:
               
173-477
               

               
Cow position:
               
chr23:11081141-11080838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
205, 156
               

               
Conread position:
               
176-581
               

               
Cow position:
               
chr23:417204-416794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 12
               

               
Conread position:
               
182-470
               

               
Cow position:
               
chr23:25408888-25408599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 45
               

               
Conread position:
               
183-436
               

               
Cow position:
               
chr23:20248640-20248902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
50, 40
               

               
Conread position:
               
191-462
               

               
Cow position:
               
chr23:36128856-36129131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
33, 10
               

               
Conread position:
               
191-463
               

               
Cow position:
               
chr23:7175668-7175391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
33, 51
               

               
Conread position:
               
196-462
               

               
Cow position:
               
chr23:21788725-21788999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
196-581
               

               
Cow position:
               
chr23:15056595-15057002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
15, 158
               

               
Conread position:
               
197-463
               

               
Cow position:
               
chr23:1670943-1670687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
28, 70
               

               
Conread position:
               
199-461
               

               
Cow position:
               
chr23:670658-670393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
28, 62
               

               
Conread position:
               
199-462
               

               
Cow position:
               
chr23:28053310-28053049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
203-394
               

               
Cow position:
               
chr23:32479993-32480192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
54, 21
               

               
Conread position:
               
203-461
               

               
Cow position:
               
chr23:7220978-7221241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
129, 20
               

               
Conread position:
               
203-463
               

               
Cow position:
               
chr23:32309718-32309452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 20
               

               
Conread position:
               
205-462
               

               
Cow position:
               
chr23:8293534-8293273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
28, 18
               

               
Conread position:
               
205-463
               

               
Cow position:
               
chr23:7402734-7402477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7.9874e-44
               

               
Alignm gaps (pig, cow):
               
27, 15
               

               
Conread position:
               
205-463
               

               
Cow position:
               
chr23:11845309-11845059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
22, 41
               

               
Conread position:
               
206-392
               

               
Cow position:
               
chr23:23114064-23113873 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
19, 61
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr23:25669060-25669297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
29, 66
               

               
Conread position:
               
213-445
               

               
Cow position:
               
chr23:41589890-41590122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
19, 11
               

               
Conread position:
               
213-463
               

               
Cow position:
               
chr23:16563863-16563613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
22, 44
               

               
Conread position:
               
213-463
               

               
Cow position:
               
chr23:17404864-17404621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
10, 68
               

               
Conread position:
               
219-462
               

               
Cow position:
               
chr23:16237230-16237488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
13, 29
               

               
Conread position:
               
221-462
               

               
Cow position:
               
chr23:27997146-27996905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
12, 43
               

               
Conread position:
               
222-443
               

               
Cow position:
               
chr23:4942094-4942312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 44
               

               
Conread position:
               
222-446
               

               
Cow position:
               
chr23:29801447-29801220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
11, 19
               

               
Conread position:
               
222-463
               

               
Cow position:
               
chr23:39806889-39806643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
11, 130
               

               
Conread position:
               
222-471
               

               
Cow position:
               
chr23:35254228-35254475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
10, 24
               

               
Conread position:
               
222-556
               

               
Cow position:
               
chr23:39028797-39028450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 37
               

               
Conread position:
               
223-392
               

               
Cow position:
               
chr23:26942458-26942284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
9, 127
               

               
Conread position:
               
223-463
               

               
Cow position:
               
chr23:1605244-1604994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
9, 52
               

               
Conread position:
               
223-463
               

               
Cow position:
               
chr23:5152007-5151759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
115, 25
               

               
Conread position:
               
223-463
               

               
Cow position:
               
chr23:33695758-33696004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
158, 57
               

               
Conread position:
               
223-576
               

               
Cow position:
               
chr23:8006259-8005884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
9, 59
               

               
Conread position:
               
224-356
               

               
Cow position:
               
chr23:9713335-9713203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
47, 37
               

               
Conread position:
               
224-378
               

               
Cow position:
               
chr23:5745186-5745038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
138, 93
               

               
Conread position:
               
224-391
               

               
Cow position:
               
chr23:4329662-4329836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
224-392
               

               
Cow position:
               
chr23:1921214-1921383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
125, 42
               

               
Conread position:
               
224-446
               

               
Cow position:
               
chr23:14417668-14417898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
36, 66
               

               
Conread position:
               
224-456
               

               
Cow position:
               
chr23:809177-808944 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
131, 33
               

               
Conread position:
               
224-460
               

               
Cow position:
               
chr23:3955431-3955193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5.99994e-41
               

               
Alignm gaps (pig, cow):
               
43, 174
               

               
Conread position:
               
224-461
               

               
Cow position:
               
chr23:8959609-8959368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
37, 57
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr23:6720268-6720506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
133, 160
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr23:18367713-18367466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
57, 33
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr23:29521485-29521240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 37
               

               
Conread position:
               
224-463
               

               
Cow position:
               
chr23:39309097-39309344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 62
               

               
Conread position:
               
224-512
               

               
Cow position:
               
chr23:11380240-11380539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
26, 15
               

               
Conread position:
               
224-580
               

               
Cow position:
               
chr23:27862342-27861966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
133, 38
               

               
Conread position:
               
225-462
               

               
Cow position:
               
chr23:19978942-19979175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
153, 41
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr23:1321196-1321423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
162, 41
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr23:3208607-3208848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
44, 31
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr23:14739454-14739219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 38
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr23:36075805-36076050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr23:38854723-38854963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
153, 123
               

               
Conread position:
               
225-463
               

               
Cow position:
               
chr23:41285931-41285700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
48, 97
               

               
Conread position:
               
225-481
               

               
Cow position:
               
chr23:33232896-33233156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
132, 158
               

               
Conread position:
               
225-500
               

               
Cow position:
               
chr23:12050368-12050096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
131, 32
               

               
Conread position:
               
227-355
               

               
Cow position:
               
chr23:1929041-1928915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
229-392
               

               
Cow position:
               
chr23:18107336-18107500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
128, 33
               

               
Conread position:
               
229-462
               

               
Cow position:
               
chr23:32105878-32105644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
127, 43
               

               
Conread position:
               
230-461
               

               
Cow position:
               
chr23:1803793-1803563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
103, 27
               

               
Conread position:
               
230-463
               

               
Cow position:
               
chr23:16609799-16610039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
43, 32
               

               
Conread position:
               
231-411
               

               
Cow position:
               
chr23:5515976-5515791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
110, 29
               

               
Conread position:
               
231-461
               

               
Cow position:
               
chr23:32961357-32961596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
39, 20
               

               
Conread position:
               
231-463
               

               
Cow position:
               
chr23:16664564-16664779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
31, 87
               

               
Conread position:
               
231-465
               

               
Cow position:
               
chr23:4608376-4608613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-34
               

               
Alignm gaps (pig, cow):
               
147, 17
               

               
Conread position:
               
231-470
               

               
Cow position:
               
chr23:4579033-4579272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
37, 55
               

               
Conread position:
               
233-452
               

               
Cow position:
               
chr23:1068312-1068531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
135, 29
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr23:9594830-9595057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
93, 28
               

               
Conread position:
               
234-463
               

               
Cow position:
               
chr23:14191557-14191320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
8e-33
               

               
Alignm gaps (pig, cow):
               
35, 26
               

               
Conread position:
               
235-409
               

               
Cow position:
               
chr23:11250403-11250229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
121, 36
               

               
Conread position:
               
235-461
               

               
Cow position:
               
chr23:406170-406389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
142, 45
               

               
Conread position:
               
235-463
               

               
Cow position:
               
chr23:20980839-20980616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
24, 84
               

               
Conread position:
               
236-461
               

               
Cow position:
               
chr23:4980544-4980771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
143, 59
               

               
Conread position:
               
237-463
               

               
Cow position:
               
chr23:1991432-1991656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
116, 20
               

               
Conread position:
               
237-468
               

               
Cow position:
               
chr23:2259592-2259834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
238-471
               

               
Cow position:
               
chr23:31607151-31607396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
71, 42
               

               
Conread position:
               
240-463
               

               
Cow position:
               
chr23:27789878-27789655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
71, 17
               

               
Conread position:
               
244-463
               

               
Cow position:
               
chr23:1605670-1605450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
124, 26
               

               
Conread position:
               
245-446
               

               
Cow position:
               
chr23:587392-587183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
111, 17
               

               
Conread position:
               
245-463
               

               
Cow position:
               
chr23:7321811-7322027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 21
               

               
Conread position:
               
247-400
               

               
Cow position:
               
chr23:4804144-4804299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
15, 65
               

               
Conread position:
               
247-457
               

               
Cow position:
               
chr23:25189336-25189118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
247-462
               

               
Cow position:
               
chr23:23884157-23884368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
152, 33
               

               
Conread position:
               
248-472
               

               
Cow position:
               
chr23:12896616-12896839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
23, 53
               

               
Conread position:
               
254-463
               

               
Cow position:
               
chr23:7392309-7392511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
123, 26
               

               
Conread position:
               
254-491
               

               
Cow position:
               
chr23:37992968-37992732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
100, 12
               

               
Conread position:
               
258-472
               

               
Cow position:
               
chr23:10415048-10415263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-23
               

               
Alignm gaps (pig, cow):
               
118, 15
               

               
Conread position:
               
261-462
               

               
Cow position:
               
chr23:21343273-21343478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-32
               

               
Alignm gaps (pig, cow):
               
115, 81
               

               
Conread position:
               
261-463
               

               
Cow position:
               
chr23:10868734-10868532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
5, 96
               

               
Conread position:
               
262-459
               

               
Cow position:
               
chr23:6158244-6158439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
115, 147
               

               
Conread position:
               
263-462
               

               
Cow position:
               
chr23:14189581-14189786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 198
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr23:4523008-4523191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
110, 21
               

               
Conread position:
               
268-446
               

               
Cow position:
               
chr23:31739830-31739646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
268-463
               

               
Cow position:
               
chr23:36199261-36199064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
126, 74
               

               
Conread position:
               
272-581
               

               
Cow position:
               
chr23:30656208-30656533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 92
               

               
Conread position:
               
274-470
               

               
Cow position:
               
chr23:39793415-39793218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
128, 74
               

               
Conread position:
               
275-463
               

               
Cow position:
               
chr23:360952-361139 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-39
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
283-463
               

               
Cow position:
               
chr23:3727440-3727631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
293-460
               

               
Cow position:
               
chr23:4421037-4421203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
294-462
               

               
Cow position:
               
chr23:222013-221842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
84, 52
               

               
Conread position:
               
299-463
               

               
Cow position:
               
chr23:38414023-38414186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
83, 37
               

               
Conread position:
               
300-462
               

               
Cow position:
               
chr23:26741518-26741678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
52, 79
               

               
Conread position:
               
310-463
               

               
Cow position:
               
chr23:14895872-14896033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
69, 35
               

               
Conread position:
               
317-462
               

               
Cow position:
               
chr23:35926514-35926366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 30
               

               
Conread position:
               
330-463
               

               
Cow position:
               
chr23:7937636-7937769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
77, 16
               

               
Conread position:
               
330-498
               

               
Cow position:
               
chr23:9235163-9235328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
83, 19
               

               
Conread position:
               
377-546
               

               
Cow position:
               
chr23:36227374-36227554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
463-577
               

               
Cow position:
               
chr23:2269571-2269685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
9e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               
Show alignments to all cow chromosomes.